BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,243,418	T→C	V111V (GTA→GTG)	ycgR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,243,418	0	T	C	100.0%	676.9 / NA	216	V111V (GTA→GTG)	ycgR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (113/103); total (113/103)

Only 100 of 220 total aligned reads displayed.

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

 aaaCGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGcaca                                                                                        <  1:1256435/93‑1 (MQ=255)

  aacgtaacgtACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaa                                                                                       >  2:2555039/1‑93 (MQ=255)

  aacgtaacgtACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACaa                                                                                       >  2:3080280/1‑93 (MQ=255)

     gtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAcc                                                                                    >  2:6321870/1‑93 (MQ=255)

     gtaacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAcc                                                                                    >  2:1658451/1‑93 (MQ=255)

      taacgtaCTGTTATCCGTCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   <  2:5213432/93‑1 (MQ=255)

      taacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCa                                                                                   >  1:7707364/1‑93 (MQ=255)

       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAt                                                                                  <  1:5820592/93‑1 (MQ=255)

       aacgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCAt                                                                                  <  1:4453838/93‑1 (MQ=255)

         cgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATaa                                                                                <  1:5237442/93‑1 (MQ=255)

         cgtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATaa                                                                                <  1:4661062/93‑1 (MQ=255)

          gtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAg                                                                               >  2:57322/1‑93 (MQ=255)

          gtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAg                                                                               >  1:5570386/1‑93 (MQ=255)

          gtaCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAg                                                                               >  1:7877334/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:2363627/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  2:7689277/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAgg                                                                              >  1:5481176/1‑93 (MQ=255)

           taCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAAACATAAgg                                                                              >  1:2547837/1‑93 (MQ=255)

            aCTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAggg                                                                             >  2:3410104/1‑92 (MQ=255)

             cTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTg                                                                            >  1:6285398/1‑93 (MQ=255)

               gTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTggg                                                                          >  1:2009671/1‑93 (MQ=255)

                ttATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGa                                                                         <  2:2692127/93‑1 (MQ=255)

                 tATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAg                                                                        >  2:4922331/1‑93 (MQ=255)

                  aTCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAgg                                                                       <  2:6162061/93‑1 (MQ=255)

                        cAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtac                                                                 <  2:1799656/93‑1 (MQ=255)

                         aGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacg                                                                >  2:3232993/1‑93 (MQ=255)

                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               <  1:1542903/93‑1 (MQ=255)

                          gTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               >  1:3607150/1‑93 (MQ=255)

                          gTTTGGCCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgg                                                               <  1:5799775/93‑1 (MQ=255)

                           tttGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGcggtacgga                                                              >  1:4008290/1‑92 (MQ=255)

                               gTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaata                                                          <  2:59919/93‑1 (MQ=255)

                               gTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaata                                                          >  2:1545111/1‑93 (MQ=255)

                                tCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGtaataa                                                         <  2:218180/93‑1 (MQ=255)

                                  tGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGTCGGTACGGTAATAAAt                                                       <  2:5331256/93‑1 (MQ=255)

                                  tGGAAAAATTAGGGCGATTGAAGTGGGCGGGAGTTGC‑GAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATg                                                      <  2:3696757/93‑1 (MQ=255)

                                   ggCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATg                                                      >  1:348950/1‑93 (MQ=255)

                                   ggCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATg                                                      <  1:2300138/93‑1 (MQ=255)

                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     <  1:3416673/93‑1 (MQ=255)

                                    gCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGc                                                     >  1:5833596/1‑93 (MQ=255)

                                        aaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGa                                                 >  2:3533914/1‑93 (MQ=255)

                                        aaaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGa                                                 >  1:4930104/1‑93 (MQ=255)

                                         aaTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGaa                                                <  1:1117741/93‑1 (MQ=255)

                                          aTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAg                                               >  2:2230746/1‑93 (MQ=255)

                                          aTAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAg                                               <  2:4057455/93‑1 (MQ=255)

                                              ggCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGc                                           <  1:6880832/93‑1 (MQ=255)

                                              ggCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGc                                           >  1:4070336/1‑93 (MQ=255)

                                               gCGGATGGAGTGGGGCGGAGCTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCa                                          >  2:7347592/1‑93 (MQ=255)

                                                gggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAATCCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCaa                                         <  1:3238931/92‑1 (MQ=255)

                                                cGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCaa                                         >  2:7589171/1‑93 (MQ=255)

                                                 ggATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAg                                        <  1:7424863/93‑1 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  2:4670429/1‑93 (MQ=255)

                                                  gATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGGACGGTAATAAATGCCGGAAGCTGCAAGt                                       >  1:2916059/1‑93 (MQ=255)

                                                    tGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTAt                                     >  2:3915646/1‑93 (MQ=255)

                                                     ggAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTAtt                                    <  2:4598220/93‑1 (MQ=255)

                                                      gAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGGGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTc                                   >  2:6118504/1‑93 (MQ=255)

                                                       aGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCa                                  <  2:4212818/93‑1 (MQ=255)

                                                        gTGGGGCGGAGATGCGGATATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCAc                                 <  2:6005910/93‑1 (MQ=255)

                                                          ggggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActc                               <  2:7385510/93‑1 (MQ=255)

                                                          ggggCAGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATCAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTTTTCActc                               <  2:6996238/93‑1 (MQ=255)

                                                           gggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActct                              <  1:1976834/93‑1 (MQ=255)

                                                           gggCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCActct                              <  2:4783642/93‑1 (MQ=255)

                                                             gCGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgc                            <  1:7869852/93‑1 (MQ=255)

                                                              cGGAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgct                           >  1:4105889/1‑93 (MQ=255)

                                                               ggAGATGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTctgctg                          <  1:1061489/93‑1 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         <  2:2352612/93‑1 (MQ=255)

                                                                gagaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGt                         >  2:2791174/1‑93 (MQ=255)

                                                                 ggaTGCGGGAATATCGGCGTCGTTGCACAAACCATAATGTGGGAGGTGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa                        <  1:326841/92‑1 (MQ=255)

                                                                 agaTGCGGAAATGTCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa                        <  1:7349831/93‑1 (MQ=255)

                                                                  gaTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGGGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAg                       >  2:5005735/1‑93 (MQ=255)

                                                                   aTGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgt                      <  2:1224654/93‑1 (MQ=255)

                                                                    tGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt                     >  1:6931945/1‑93 (MQ=255)

                                                                    tGCGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgtt                     >  2:5553728/1‑93 (MQ=255)

                                                                      cGGAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgt                   <  1:6943975/93‑1 (MQ=255)

                                                                       ggAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgtt                  <  2:1065141/93‑1 (MQ=255)

                                                                       ggAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAgttgtt                  >  2:1905612/1‑93 (MQ=255)

                                                                        gAACTATCGGCGTCGTTGCACAAACCATAAGGCGGGCGGCGGAACGGTAATAATTGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:3532096/1‑93 (MQ=255)

                                                                        gAAATATCGGTGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:6999870/1‑93 (MQ=255)

                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:6594462/1‑93 (MQ=255)

                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  1:4327558/1‑93 (MQ=255)

                                                                        gAAATATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTc                 >  2:4032706/1‑93 (MQ=255)

                                                                         aaaTATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCa                >  1:5644300/1‑93 (MQ=255)

                                                                         aaaTATCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCa                >  1:1161172/1‑93 (MQ=255)

                                                                           atatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAAc              >  2:5402274/1‑93 (MQ=255)

                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             >  1:5394269/1‑93 (MQ=255)

                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             >  2:2137623/1‑93 (MQ=255)

                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             <  1:1652519/93‑1 (MQ=255)

                                                                            tatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGGAATTAATGCCGGAAGCTGCAAGTATTCACTCTGCCGGAGTTGTTCAACa             >  2:3436540/1‑93 (MQ=255)

                                                                            aatCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACa             <  1:6038227/92‑1 (MQ=255)

                                                                             atCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg            <  1:4220581/93‑1 (MQ=255)

                                                                             atCGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAg            >  2:7087270/1‑93 (MQ=255)

                                                                               cGGCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTa          <  2:2453639/93‑1 (MQ=255)

                                                                                ggCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaa         >  2:645100/1‑93 (MQ=255)

                                                                                 gCGTCGTTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTaaa        >  1:2573020/1‑93 (MQ=255)

                                                                                  cgtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCCCTCTGCTGTAGTTGTTCAACAGTAAAc       <  1:6475233/93‑1 (MQ=255)

                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      <  1:7231016/93‑1 (MQ=255)

                                                                                   gtcgtTGCACAAACCATAAGGTGGGAGGCGGGACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACt      >  1:2804966/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  2:7765096/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  1:2739223/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     >  1:5073454/1‑93 (MQ=255)

                                                                                    tcgtTGCACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTc     <  1:6675054/93‑1 (MQ=255)

GAAACGTAACGTACTGTTATCCGCCAGTTTGGTCTGGCAAAAATAAGGCGGATGGAGTGGGGCGGAGATGCGGAAATATCGGCGTCGTTGTACAAACCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTAGTTGTTCAACAGTAAACTCGAC  >  NC_000913/1243328‑1243507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`