BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,339,624	A→G	K348R (AAG→AGG)	yciM →	putative heat shock protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,339,624	0	A	G	100.0%	602.9 / NA	189	K348R (AAG→AGG)	yciM	putative heat shock protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (85/104); total (85/104)

Only 100 of 198 total aligned reads displayed.

TCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGG  >  NC_000913/1339534‑1339712

tCCATAAGTTAATGGATTACCATTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGAGGGTGCTGCGTGACATGGTTGGCGAGAggg                                                                                        <  1:417764/93‑1 (MQ=255)

tCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAggg                                                                                        >  1:6731625/1‑93 (MQ=255)

tCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAggg                                                                                        >  1:7315835/1‑93 (MQ=255)

 ccATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAgggg                                                                                       >  2:3773923/1‑92 (MQ=255)

  cATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTa                                                                                      >  1:6999254/1‑93 (MQ=255)

   aTAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAc                                                                                     <  2:806629/93‑1 (MQ=255)

   aTAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTAc                                                                                     <  1:3649353/93‑1 (MQ=255)

    tAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACg                                                                                    >  2:7495581/1‑93 (MQ=255)

    tAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACg                                                                                    >  2:5497563/1‑93 (MQ=255)

      aGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgta                                                                                  <  1:5374775/93‑1 (MQ=255)

      aGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgta                                                                                  <  2:1150275/93‑1 (MQ=255)

      aGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgta                                                                                  <  1:3408164/93‑1 (MQ=255)

      aGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgta                                                                                  <  2:1537415/93‑1 (MQ=255)

      aGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgta                                                                                  <  2:2256320/93‑1 (MQ=255)

       gTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtag                                                                                 <  2:1839226/93‑1 (MQ=255)

       gTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtag                                                                                 >  1:1654169/1‑93 (MQ=255)

       gTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtag                                                                                 >  1:877435/1‑93 (MQ=255)

         tAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagta                                                                               <  1:7805627/93‑1 (MQ=255)

         tAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCAGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACgtagta                                                                               <  1:5781112/93‑1 (MQ=255)

          aaTGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTaa                                                                              <  2:142427/93‑1 (MQ=255)

           aTGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAg                                                                             >  1:3369160/1‑93 (MQ=255)

            tGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGc                                                                            >  2:3303827/1‑93 (MQ=255)

             ggATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGcc                                                                           <  1:7094250/93‑1 (MQ=255)

              gATGACCACTTAAATGAAGCGGAAGAAGTGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTATTAAGCCt                                                                          <  2:782785/93‑1 (MQ=255)

               aTTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTc                                                                         <  1:4731186/93‑1 (MQ=255)

               aTTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTc                                                                         >  2:3017148/1‑93 (MQ=255)

               aTTACAACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTc                                                                         <  2:5955563/93‑1 (MQ=255)

                ttACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCg                                                                        <  1:5803596/93‑1 (MQ=255)

                 tACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGt                                                                       <  1:3943829/93‑1 (MQ=255)

                 tACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGt                                                                       >  1:6053593/1‑93 (MQ=255)

                 tACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGt                                                                       >  1:5143869/1‑93 (MQ=255)

                   ccACTTAAATGAAGCGGAAGAAGGGCGAGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTa                                                                     <  1:2847153/93‑1 (MQ=255)

                    cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt                                                                    <  2:7258251/93‑1 (MQ=255)

                    cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt                                                                    <  2:5360350/93‑1 (MQ=255)

                    cACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTAt                                                                    >  1:1282510/1‑93 (MQ=255)

                     aCTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATc                                                                   <  1:5497564/93‑1 (MQ=255)

                      cTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCg                                                                  <  1:1206433/93‑1 (MQ=255)

                       ttAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGt                                                                 >  1:1685188/1‑93 (MQ=255)

                       ttAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGt                                                                 <  1:7751024/93‑1 (MQ=255)

                        tAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGtg                                                                >  1:2562232/1‑92 (MQ=255)

                          aaTGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGc                                                              >  2:3077455/1‑93 (MQ=255)

                               aGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGaa                                                         <  1:7227189/93‑1 (MQ=255)

                                gCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGaaa                                                        <  1:6139359/93‑1 (MQ=255)

                                 cGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACAGGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAt                                                       <  2:4939598/93‑1 (MQ=255)

                                  ggAAGAAGGGCGTGTCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtg                                                      >  2:4806638/1‑93 (MQ=255)

                                  ggAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtg                                                      >  2:243833/1‑93 (MQ=255)

                                    aagaagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtgtg                                                    <  2:5831772/93‑1 (MQ=255)

                                    aagaagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAAtgtg                                                    <  2:1305345/93‑1 (MQ=255)

                                     agaagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTgg                                                   <  1:2256315/93‑1 (MQ=255)

                                       aagGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtt                                                 <  1:4094801/93‑1 (MQ=255)

                                        agGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGttt                                                >  1:4924130/1‑93 (MQ=255)

                                        agGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGttt                                                >  2:5210602/1‑93 (MQ=255)

                                        agGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGttt                                                <  1:3732483/93‑1 (MQ=255)

                                         gggCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGtttt                                               <  1:2036138/93‑1 (MQ=255)

                                          ggCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTATTAAGCCTCGTTATCGTTGCTAGAAATGTGGTTTTa                                              <  2:3413876/93‑1 (MQ=255)

                                          ggCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTa                                              <  2:2487659/93‑1 (MQ=255)

                                               gCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCgaa                                         >  1:7342146/1‑91 (MQ=255)

                                                ccAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCAt                                        >  2:5648838/1‑93 (MQ=255)

                                                 cAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa                                       <  2:1790843/93‑1 (MQ=255)

                                                 cAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATa                                       >  2:2653006/1‑93 (MQ=255)

                                                   aaGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATaca                                     <  2:2825928/93‑1 (MQ=255)

                                                     gagagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAcc                                   >  2:4700815/1‑93 (MQ=255)

                                                     gagagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAcc                                   <  1:3268720/93‑1 (MQ=255)

                                                      agagCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACAccc                                  >  1:2394637/1‑93 (MQ=255)

                                                        agCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctc                                <  2:3165949/93‑1 (MQ=255)

                                                         gCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctct                               >  2:3926265/1‑93 (MQ=255)

                                                         gCCTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCctct                               >  2:3698356/1‑93 (MQ=255)

                                                          ccTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTa                              <  1:6585661/93‑1 (MQ=255)

                                                           cTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTAc                             >  2:6135313/1‑93 (MQ=255)

                                                           cTGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGACTCGTTATCGTTGCAAGAAATGTGGTTTTACCGCATACACCCTCTAc                             >  2:5126502/1‑93 (MQ=255)

                                                            tGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTAcg                            >  1:5319834/1‑92 (MQ=255)

                                                            tGATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACt                            <  2:3517023/93‑1 (MQ=255)

                                                             gATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAACTGTGGTTTTACCGCATACACCCTCTACTg                           >  1:5258770/1‑93 (MQ=255)

                                                             gATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTg                           >  2:1616490/1‑93 (MQ=255)

                                                             gATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTg                           <  1:1940674/93‑1 (MQ=255)

                                                             gATGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTg                           >  1:7021694/1‑93 (MQ=255)

                                                              aTGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTgg                          >  2:3751245/1‑93 (MQ=255)

                                                               tGGTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGc                         >  1:3814424/1‑93 (MQ=255)

                                                               gggTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGc                         >  2:7868444/2‑93 (MQ=255)

                                                                ggTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCa                        <  2:7734359/93‑1 (MQ=255)

                                                                ggTGCTGCGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCa                        >  1:43894/1‑93 (MQ=255)

                                                                     tgcGTGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTc                   <  1:5421936/93‑1 (MQ=255)

                                                                         tGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTc               >  1:3476942/1‑93 (MQ=255)

                                                                         tGACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTc               >  1:6507136/1‑93 (MQ=255)

                                                                          gACATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCt              <  2:265776/93‑1 (MQ=255)

                                                                           aCATGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCtt             >  1:7632031/1‑93 (MQ=255)

                                                                             aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCCTACACCCTCTACTGGCATTGTCCGTCTTGt           >  1:3690313/1‑93 (MQ=255)

                                                                             aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGt           >  1:1316072/1‑93 (MQ=255)

                                                                             aTGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGt           >  2:3962734/1‑93 (MQ=255)

                                                                              tGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTc          >  1:2435763/1‑93 (MQ=255)

                                                                              tGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTc          >  1:7481795/1‑93 (MQ=255)

                                                                              tGGTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTc          <  2:6246971/93‑1 (MQ=255)

                                                                                gTTGGCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCgg        <  2:4471554/93‑1 (MQ=255)

                                                                                   ggCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGcc     >  2:6739498/1‑93 (MQ=255)

                                                                                   ggCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGcc     >  2:2541918/1‑93 (MQ=255)

                                                                                    gCGAGAGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCt    <  1:3221234/93‑1 (MQ=255)

                                                                                      gagaGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTgg  <  1:1481637/93‑1 (MQ=255)

                                                                                      gagaGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTgg  <  1:383868/93‑1 (MQ=255)

                                                                                      gagaGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTgg  <  1:2009725/93‑1 (MQ=255)

                                                                                      gagaGGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTgg  >  1:3785884/1‑93 (MQ=255)

TCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGG  >  NC_000913/1339534‑1339712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`