BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,356,924	C→T	P96P (CCG→CCA)	ycjJ ←	putative amino acid/amine transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,356,924	0	C	T	100.0%	768.0 / NA	216	P96P (CCG→CCA)	ycjJ	putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (114/102); total (114/102)

Only 100 of 225 total aligned reads displayed.

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         >  1:5584193/1‑93 (MQ=255)

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         <  1:5007754/93‑1 (MQ=255)

ggAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTgg                                                                                         <  1:6184776/93‑1 (MQ=255)

 gagagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTggg                                                                                        <  1:7071409/93‑1 (MQ=255)

  agagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGt                                                                                       >  1:5741771/1‑93 (MQ=255)

   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      >  2:1581452/1‑93 (MQ=255)

   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      <  1:2210641/93‑1 (MQ=255)

   gagaTAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGtt                                                                                      >  1:3514455/1‑93 (MQ=255)

    agatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTa                                                                                     <  1:6417732/93‑1 (MQ=255)

     gatagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTaa                                                                                    <  1:6380328/93‑1 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   <  1:7189368/93‑1 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   >  2:1090553/1‑93 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   <  2:448137/93‑1 (MQ=255)

      atagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAAt                                                                                   <  1:5966661/93‑1 (MQ=255)

       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  >  2:2970446/1‑93 (MQ=255)

       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  <  2:707126/93‑1 (MQ=255)

       tagatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATc                                                                                  >  2:4327756/1‑93 (MQ=255)

         gatTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGa                                                                                <  1:3645544/93‑1 (MQ=255)

           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              >  2:3982772/1‑93 (MQ=255)

           ttttCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACt                                                                              <  2:6061598/93‑1 (MQ=255)

              tCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACtttt                                                                           <  1:3096018/93‑1 (MQ=255)

                gCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTgc                                                                         <  2:5223029/93‑1 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:2690612/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  2:600425/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:5171674/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  2:1215969/1‑93 (MQ=255)

                   aacaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGcgcg                                                                      >  1:7063441/1‑93 (MQ=255)

                    acaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGt                                                                     >  1:3921424/1‑93 (MQ=255)

                    acaaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGt                                                                     <  2:6219617/93‑1 (MQ=255)

                     caaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTa                                                                    <  2:5841108/93‑1 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  1:5676761/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  2:7718497/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  2:2333665/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  2:3197167/1‑93 (MQ=255)

                      aaGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCACCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAg                                                                   >  1:4683113/1‑93 (MQ=255)

                       aGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAgg                                                                  <  1:7643133/93‑1 (MQ=255)

                       aGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAgg                                                                  >  2:7670441/1‑93 (MQ=255)

                       aGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGCTTAATCGACTTTTGCGCGTAgg                                                                  <  2:4978976/93‑1 (MQ=255)

                         aCGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGta                                                                <  1:3475840/93‑1 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              <  1:2976629/93‑1 (MQ=255)

                           gTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGtata                                                              <  1:232507/93‑1 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             <  2:1885896/93‑1 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             >  2:7181195/1‑93 (MQ=255)

                            ttAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAg                                                             <  1:1168422/93‑1 (MQ=255)

                              aaTCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGc                                                           >  2:2599124/1‑93 (MQ=255)

                               atcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGcc                                                          >  2:307976/1‑93 (MQ=255)

                               atcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGcc                                                          >  2:1400561/1‑93 (MQ=255)

                                tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg                                                         >  1:1452228/1‑93 (MQ=255)

                                tcatcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCg                                                         >  2:3987498/1‑93 (MQ=255)

                                 catcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGa                                                        >  2:2062729/1‑93 (MQ=255)

                                  atcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGaa                                                       >  1:6545553/1‑93 (MQ=255)

                                  atcGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGaa                                                       >  1:1900752/1‑93 (MQ=255)

                                  atcGGCAAAAAGACATAATCCGGCAGCAATGCCCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGaa                                                       <  2:6740036/93‑1 (MQ=255)

                                      gCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCgg                                                   <  1:4798762/93‑1 (MQ=255)

                                         aaaaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCt                                                >  1:536066/1‑93 (MQ=255)

                                           aaGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTcc                                              <  2:3293383/93‑1 (MQ=255)

                                            agagATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCg                                             >  2:6411138/1‑93 (MQ=255)

                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAAc                                        <  2:6533746/93‑1 (MQ=255)

                                                 tAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGACCTCCGGAAAc                                        >  2:171503/1‑93 (MQ=255)

                                                  atgccAGCATAGACGAGCAGCCCACCATATACCCGATGTGTGAGTTAATCGCCTTTTGCGAGTAGGTATAGGCCGAGCCCGCCTCCGGAAACt                                       <  2:3017016/90‑1 (MQ=255)

                                                  aaTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACt                                       <  2:5127789/93‑1 (MQ=255)

                                                  aaTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACt                                       <  1:5765956/93‑1 (MQ=255)

                                                  aaTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACt                                       <  2:2482037/93‑1 (MQ=255)

                                                   aTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTg                                      >  1:1972712/1‑93 (MQ=255)

                                                   aTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTg                                      >  2:6172244/1‑93 (MQ=255)

                                                   aTCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTg                                      >  1:5086337/1‑93 (MQ=255)

                                                    tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTgg                                     <  2:887682/93‑1 (MQ=255)

                                                    tCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTgg                                     >  2:2127812/1‑93 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGCAACTggg                                    >  1:4231782/1‑92 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    <  2:2690611/93‑1 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    <  1:5663449/93‑1 (MQ=255)

                                                     ccAGCAGCGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGc                                    >  2:6613714/1‑93 (MQ=255)

                                                        gcagaGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGaa                                 <  2:1521660/93‑1 (MQ=255)

                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              >  2:7346863/1‑93 (MQ=255)

                                                           gcGATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCa                              <  1:4190448/93‑1 (MQ=255)

                                                             gATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGt                            >  2:6290226/1‑93 (MQ=255)

                                                             gATGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGt                            <  2:3443783/93‑1 (MQ=255)

                                                              aTGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGtt                           <  1:5446140/93‑1 (MQ=255)

                                                               tGACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGttt                          >  2:3500412/1‑93 (MQ=255)

                                                                gACCAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTg                         >  2:1176809/1‑93 (MQ=255)

                                                                  ccAGCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGcc                       <  2:1869026/93‑1 (MQ=255)

                                                                     gCCGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTa                    >  1:3978594/1‑93 (MQ=255)

                                                                       cGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGc                  <  1:3875884/93‑1 (MQ=255)

                                                                       cGACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGGTTGCCGTAGc                  >  1:5469510/1‑93 (MQ=255)

                                                                        gACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCt                 >  1:1585166/1‑93 (MQ=255)

                                                                        gACCATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGCAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCt                 >  1:2567648/1‑93 (MQ=255)

                                                                         gctaTAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTg                <  1:7795083/90‑1 (MQ=255)

                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              >  1:2860784/1‑93 (MQ=255)

                                                                           cATAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGAt              >  2:7872613/1‑93 (MQ=255)

                                                                            aTAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATa             >  2:558481/1‑93 (MQ=255)

                                                                             tAAATCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAg            >  1:7841405/1‑93 (MQ=255)

                                                                              aaaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGc           <  2:6262026/93‑1 (MQ=255)

                                                                              aaaTCCGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGc           >  2:6798387/1‑93 (MQ=255)

                                                                               aaTCCGACGTGTGGGTTAATCGACGTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCg          <  2:1669531/93‑1 (MQ=255)

                                                                                aTCCGACGTGTGTGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCgg         <  1:103646/93‑1 (MQ=255)

                                                                                   cGACGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTaa      <  2:4676786/93‑1 (MQ=255)

                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   >  1:3314566/1‑93 (MQ=255)

                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   >  1:7924388/1‑93 (MQ=255)

                                                                                      cGTGTGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   <  2:3473531/93‑1 (MQ=255)

                                                                                      cGTGTGGGTTAATAGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACa   <  1:562230/93‑1 (MQ=255)

GGAGAGATAGATTTTCGCCAACAAGACGTTAATCATCGGCAAAAAGAGATAATCCAGCAGCGATGACCAGCCGACCATAAATCCGACGTGCGGGTTAATCGACTTTTGCGCGTAGGTATAGGCCGAACCGGCCTCCGGAAACTGGCGAACCAGTTTGCCGTAGCTGATAGCGGTAAACAG  >  NC_000913/1356834‑1357013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`