BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,376,771	C→T	G288G (GGC→GGT)	ycjT →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,376,771	0	C	T	99.0%	723.2 / NA	203	G288G (GGC→GGT)	ycjT	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (90/111); minor base G (2/0); total (92/111)
Fisher's exact test for biased strand distribution p-value = 2.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 215 total aligned reads displayed.

GTGCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGC  >  NC_000913/1376681‑1376860

gtgCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAAtggtgg                                                                                         <  1:2694712/93‑1 (MQ=255)

gtgCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAAtggtgg                                                                                         >  1:4569237/1‑93 (MQ=255)

 tgCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATggtggc                                                                                        <  1:4490456/93‑1 (MQ=255)

   cgcgcAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGa                                                                                      <  2:1106367/93‑1 (MQ=255)

    gcgcAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGaa                                                                                     <  2:1186116/93‑1 (MQ=255)

    gcgcAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGaa                                                                                     <  2:5766656/93‑1 (MQ=255)

      gcagcaGAGTGACAACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAgc                                                                                   <  2:3987652/93‑1 (MQ=255)

        agcagAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAgcgc                                                                                 <  2:6301604/93‑1 (MQ=255)

         gcagAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATGACGGTAAATGGTGGCGAAGCGCa                                                                                >  2:4238566/1‑93 (MQ=255)

         gcagAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGAAAATGGTGGCGAAgcgcc                                                                                >  2:5373706/1‑92 (MQ=255)

          cagAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCAc                                                                               <  1:5514328/93‑1 (MQ=255)

            gagTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGa                                                                             <  1:5039222/93‑1 (MQ=255)

            gagTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGa                                                                             <  2:1939497/93‑1 (MQ=255)

               ttACGACCAACTTCTTGCAGCATCAACAGAAAGCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCa                                                                          >  1:4937542/1‑93 (MQ=255)

               ttACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCa                                                                          <  1:7790444/93‑1 (MQ=255)

                tACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAg                                                                         <  2:563226/93‑1 (MQ=255)

                tACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAg                                                                         <  2:6530689/93‑1 (MQ=255)

                   gACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCaa                                                                      <  2:3829631/93‑1 (MQ=255)

                    aCCAACTTCTTGCAGCATCAACAGAAAGCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAg                                                                     <  1:6112106/93‑1 (MQ=255)

                    aCCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAg                                                                     <  1:2683760/93‑1 (MQ=255)

                    aCCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAg                                                                     <  1:4664177/93‑1 (MQ=255)

                      cAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCg                                                                   >  1:5406682/1‑93 (MQ=255)

                        aCTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGtg                                                                 >  2:5257668/1‑92 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                <  2:3427261/93‑1 (MQ=255)

                         cttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTa                                                                <  2:6006551/93‑1 (MQ=255)

                          ttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAg                                                               >  1:7004454/1‑93 (MQ=255)

                          ttcttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAg                                                               >  1:1230495/1‑93 (MQ=255)

                             ttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGAtt                                                            >  2:7766579/1‑93 (MQ=255)

                             ttGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGAtt                                                            <  2:7743361/93‑1 (MQ=255)

                              tGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTa                                                           <  2:1599718/93‑1 (MQ=255)

                                 agcaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgc                                                        <  2:5768998/93‑1 (MQ=255)

                                 agcaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgc                                                        >  1:2744504/1‑93 (MQ=255)

                                  gcaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgcg                                                       >  2:1431489/1‑93 (MQ=255)

                                  acaTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgcg                                                       <  1:1769076/92‑1 (MQ=255)

                                   caTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATgcgc                                                      >  2:7408480/1‑93 (MQ=255)

                                    aTCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCt                                                     >  1:2948031/1‑93 (MQ=255)

                                      cAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCttt                                                   <  1:5662864/93‑1 (MQ=255)

                                       aaCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  1:7219289/93‑1 (MQ=255)

                                       aaCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  2:6394312/93‑1 (MQ=255)

                                       aaCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  1:3782615/93‑1 (MQ=255)

                                       aaCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  1:3683577/93‑1 (MQ=255)

                                       aaCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTa                                                  <  1:3389546/93‑1 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 <  1:5192825/93‑1 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 >  1:6746547/1‑93 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 <  2:1995286/93‑1 (MQ=255)

                                        aCAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTat                                                 >  2:2358829/1‑93 (MQ=255)

                                         cAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatc                                                >  1:5780007/1‑93 (MQ=255)

                                          aGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatca                                               <  1:2761446/93‑1 (MQ=255)

                                            aaaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatcatc                                             <  2:4058655/93‑1 (MQ=255)

                                            aaaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatcatc                                             <  2:2182624/93‑1 (MQ=255)

                                            aaaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTatcatc                                             <  1:4178004/93‑1 (MQ=255)

                                             aaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCt                                            <  1:5938668/93‑1 (MQ=255)

                                             aaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCt                                            <  2:6526045/93‑1 (MQ=255)

                                             aaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCt                                            <  1:1992243/93‑1 (MQ=255)

                                             aaaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCt                                            <  2:5903485/93‑1 (MQ=255)

                                              aaCTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTg                                           >  1:5399811/1‑93 (MQ=255)

                                                cTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTgcg                                         <  1:236134/93‑1 (MQ=255)

                                                 tGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTgcgc                                        <  1:4876650/93‑1 (MQ=255)

                                                    cGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGcatc                                     <  2:367603/93‑1 (MQ=255)

                                                     gTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGcatca                                    <  1:1498898/93‑1 (MQ=255)

                                                      tCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGcatcat                                   >  2:6112820/1‑93 (MQ=255)

                                                      tCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGcatcat                                   <  2:2456634/93‑1 (MQ=255)

                                                      tCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGcatcat                                   >  2:7178804/1‑93 (MQ=255)

                                                       cAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATg                                  >  2:213657/1‑93 (MQ=255)

                                                       cAATGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATg                                  >  2:1249301/1‑93 (MQ=255)

                                                        aaTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGa                                 <  1:4285/93‑1 (MQ=255)

                                                        aaTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGa                                 <  1:6890283/93‑1 (MQ=255)

                                                        aaTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGa                                 <  1:6414904/93‑1 (MQ=255)

                                                        aaTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGa                                 >  1:636959/1‑93 (MQ=255)

                                                         aTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGAc                                >  1:4115773/1‑93 (MQ=255)

                                                         aTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGAc                                <  1:25117/93‑1 (MQ=255)

                                                         aTGGTGGCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGAc                                >  1:5743009/1‑93 (MQ=255)

                                                          tggtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACg                               >  1:7459753/1‑93 (MQ=255)

                                                          tggtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACg                               >  1:3964773/1‑93 (MQ=255)

                                                            gtggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGcc                             >  1:3492282/1‑93 (MQ=255)

                                                             tggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCt                            >  1:7093271/1‑93 (MQ=255)

                                                              ggCAGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTg                           <  2:727669/93‑1 (MQ=255)

                                                                 aGAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGccc                        <  2:1808729/93‑1 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       >  1:7135033/1‑93 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       >  1:7504739/1‑93 (MQ=255)

                                                                  gAAACGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCa                       >  1:6616244/1‑93 (MQ=255)

                                                                    aaCGTCGTATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacg                     >  1:4699890/1‑93 (MQ=255)

                                                                      cgtcgtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacgac                   <  1:1049873/93‑1 (MQ=255)

                                                                      cgtcgtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCacgac                   <  1:6330835/93‑1 (MQ=255)

                                                                        tcgtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCAcgacga                 >  2:7256094/1‑93 (MQ=255)

                                                                          gtATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAgc               >  2:6376378/1‑93 (MQ=255)

                                                                           tATCACGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAgcg              >  1:3191993/1‑93 (MQ=255)

                                                                               aCGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcagc          <  1:1851109/93‑1 (MQ=255)

                                                                                cGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcagca         <  2:6193504/93‑1 (MQ=255)

                                                                                cGGTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcagca         <  2:1632501/93‑1 (MQ=255)

                                                                                 ggTAAATGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCgcagcag        >  1:5372721/1‑93 (MQ=255)

                                                                                    aaaTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCAt     <  2:2406664/93‑1 (MQ=255)

                                                                                    aaaTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCAt     <  1:132053/93‑1 (MQ=255)

                                                                                    aaaTGGGGGCGAAGCGCACGATCAGCAAGCGTTAAATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCAt     >  2:6458857/1‑93 (MQ=255)

                                                                                     aaTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCAtt    >  2:2849359/1‑93 (MQ=255)

                                                                                      aTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTg   >  2:6715273/1‑93 (MQ=255)

                                                                                      aTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTg   >  2:3282222/1‑93 (MQ=255)

                                                                                      aTGGTGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTg   <  1:6248574/93‑1 (MQ=255)

                                                                                      aTGGGGGCGAAACGCACGATCAGCAAACGTTAGATTATGCGGTTTTTTATCTGCGCATCATGACGCCCGCCCACGACGCGCGCAGCAGCATTg   >  2:3199159/1‑93 (MQ=255)

                                                                                       tggtggCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGc  <  2:4771967/93‑1 (MQ=255)

GTGCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGC  >  NC_000913/1376681‑1376860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`