BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,464,084	T→C	intergenic (+999/+1861)	b1400 → / ← yi222	putative transferase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,464,084	0	T	C	100.0%	772.7 / NA	242	intergenic (+999/+1861)	b1400/yi222	putative transferase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/136); total (106/136)

Only 100 of 244 total aligned reads displayed.

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

tAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCACAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGc                                                                                         <  1:4654535/93‑1 (MQ=255)

 aaCACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGcc                                                                                        >  1:836092/1‑93 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    >  2:6482818/1‑93 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    >  1:298932/1‑93 (MQ=255)

       gTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTa                                                                                  >  2:7744415/1‑93 (MQ=255)

         tGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaaa                                                                                <  1:6008100/93‑1 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaac                                                                               <  1:1870561/93‑1 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaac                                                                               <  2:5250461/93‑1 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaac                                                                               <  2:1268511/93‑1 (MQ=255)

             cTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaacaac                                                                            >  1:3200045/1‑93 (MQ=255)

              ttGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAacaaca                                                                           >  1:4184735/1‑93 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          >  1:2320392/1‑93 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          <  2:2160692/93‑1 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          >  1:5062676/1‑93 (MQ=255)

               tGAAGGGGGGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          >  1:5929426/1‑93 (MQ=255)

                gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAt                                                                         <  2:498605/93‑1 (MQ=255)

                 aaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATg                                                                        >  2:2450582/1‑93 (MQ=255)

                  aGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       <  2:4464034/93‑1 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      >  2:7609615/1‑93 (MQ=255)

                       tGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaaaa                                                                  <  1:6805950/93‑1 (MQ=255)

                       tGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaaaa                                                                  >  2:4627507/1‑93 (MQ=255)

                       tGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaaaa                                                                  >  2:7803748/1‑93 (MQ=255)

                        gAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAac                                                                 <  2:6412406/93‑1 (MQ=255)

                        gAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAac                                                                 <  2:4350563/93‑1 (MQ=255)

                          gcgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAacca                                                               <  2:320304/93‑1 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  2:269671/93‑1 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  1:7733461/93‑1 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  2:1882997/93‑1 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAACATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  1:1103462/93‑1 (MQ=255)

                            gcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccacc                                                             <  2:3764116/93‑1 (MQ=255)

                             cAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCg                                                            >  1:7314270/1‑93 (MQ=255)

                              aGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGt                                                           >  2:5816351/1‑93 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          >  1:3730696/1‑93 (MQ=255)

                                aTGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTg                                                         >  2:1521128/1‑93 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        >  1:327473/1‑93 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        <  2:3344702/93‑1 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        >  2:5878846/1‑93 (MQ=255)

                                  ggCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAc                                                       <  2:2583796/93‑1 (MQ=255)

                                  ggCGCAACGAAGTGGCAATATAATCACAACGGCGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGAc                                                       >  2:3986946/1‑93 (MQ=255)

                                   gcgcAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACg                                                      <  1:6252287/93‑1 (MQ=255)

                                     gcAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGt                                                    >  1:524048/1‑93 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               <  2:7235137/93‑1 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               >  1:709342/1‑93 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               >  2:6657719/1‑93 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATCACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               <  2:6117780/93‑1 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              <  1:5798354/93‑1 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGCGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              <  2:4301063/93‑1 (MQ=255)

                                             gTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            <  1:7905698/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  2:3441795/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:7026095/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           >  1:6767249/1‑93 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:1938241/93‑1 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:4555699/93‑1 (MQ=255)

                                               ggCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTccc                                          >  1:2530794/1‑92 (MQ=255)

                                               ggCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCa                                          >  2:3408584/1‑93 (MQ=255)

                                                gCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAc                                         <  1:781476/93‑1 (MQ=255)

                                                gCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAc                                         <  2:2063852/93‑1 (MQ=255)

                                                gCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAc                                         <  2:5543198/93‑1 (MQ=255)

                                                gCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAc                                         <  2:2331892/93‑1 (MQ=255)

                                                 cAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAcc                                        >  1:4294582/1‑93 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       <  2:5180291/93‑1 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    <  2:1955783/93‑1 (MQ=255)

                                                     ataATCACAACGGTGAGCTTGTAATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTa                                    <  2:3136893/93‑1 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   >  1:7595611/1‑93 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   <  2:6828560/93‑1 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   >  2:5041573/1‑93 (MQ=255)

                                                       aaTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACg                                  <  1:4852337/93‑1 (MQ=255)

                                                       aaTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACg                                  <  1:7176574/93‑1 (MQ=255)

                                                         tCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGa                                >  2:7935261/1‑93 (MQ=255)

                                                         tCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGa                                <  2:1175533/93‑1 (MQ=255)

                                                           acaACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGaac                              >  1:4070914/1‑92 (MQ=255)

                                                            caACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAAt                             <  1:3391823/93‑1 (MQ=255)

                                                             aaCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATc                            <  2:7395587/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  2:787604/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  2:7318783/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  1:6630190/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  2:4839914/93‑1 (MQ=255)

                                                                   gAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGt                      >  1:282674/1‑93 (MQ=255)

                                                                    tgtttGTTATTACCGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGTTTCCACCGGTACGGAAATCAACGGta                     <  1:7054421/90‑1 (MQ=18)

                                                                      cTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaat                   <  1:5125007/93‑1 (MQ=255)

                                                                       ttGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaata                  <  2:1047870/93‑1 (MQ=255)

                                                                       ttGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaata                  >  2:1160946/1‑93 (MQ=255)

                                                                       ttGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaata                  >  1:3961210/1‑93 (MQ=255)

                                                                        tGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaataa                 <  2:7515617/93‑1 (MQ=255)

                                                                         gTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAAc                >  1:2129203/1‑93 (MQ=255)

                                                                         gTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAAc                <  2:6849705/93‑1 (MQ=255)

                                                                           tattaCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACgg              >  2:5455594/1‑93 (MQ=255)

                                                                           tattaCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACgg              <  2:67892/93‑1 (MQ=255)

                                                                              taCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaa           >  2:1477117/1‑93 (MQ=255)

                                                                               tccggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaaa          <  1:2222912/90‑1 (MQ=255)

                                                                                 gggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGt        <  1:1026583/93‑1 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      <  1:1463249/93‑1 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  1:3621781/93‑1 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  1:5202865/93‑1 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  1:887220/93‑1 (MQ=255)

                                                                                     gATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAtt    <  1:5452012/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:4011938/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:6135854/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:6281059/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  2:2949903/93‑1 (MQ=255)

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`