Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,473,746 A→G K195K (AAA→AAG ydbD → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,473,7460AG98.6% 671.3 / ‑2.6 218K195K (AAA→AAGydbDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (2/1);  new base G (107/108);  total (109/109)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 232 total aligned reads displayed.

TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT  >  NC_000913/1473656‑1473835
                                                                                          |                                                                                         
tGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGgc                                                                                         <  1:4387712/93‑1 (MQ=255)
   cATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACATTGAAAATGTCAAAAAGGCGCt                                                                                      <  1:1312505/93‑1 (MQ=255)
   cATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCt                                                                                      <  1:7601134/93‑1 (MQ=255)
   cATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCt                                                                                      >  1:6353800/1‑93 (MQ=255)
     tAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtga                                                                                    >  1:6227817/1‑93 (MQ=255)
      aaTTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgat                                                                                   <  1:2282897/93‑1 (MQ=255)
        ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatga                                                                                 >  2:6617739/1‑93 (MQ=255)
        ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatga                                                                                 >  2:1234896/1‑93 (MQ=255)
        ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCtgatga                                                                                 >  2:5754720/1‑93 (MQ=255)
        ttGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAAAGTCAAAAAGGCGCtgatga                                                                                 >  2:7491649/1‑93 (MQ=255)
         tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat                                                                                >  1:7245771/1‑93 (MQ=255)
         tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat                                                                                <  1:5674336/93‑1 (MQ=255)
         tGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTgatgat                                                                                <  2:527045/93‑1 (MQ=255)
           cACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataa                                                                              >  2:3693987/1‑93 (MQ=255)
            aCCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataat                                                                             <  1:6641149/93‑1 (MQ=255)
            aCCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataat                                                                             >  1:7874978/1‑93 (MQ=255)
            aCCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataat                                                                             <  2:7623257/93‑1 (MQ=255)
            aCCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGataat                                                                             >  1:1761361/1‑93 (MQ=255)
               tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa                                                                          <  2:4510289/93‑1 (MQ=255)
               tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa                                                                          <  2:2428484/93‑1 (MQ=255)
               tgttgtTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATaaa                                                                          <  1:7153402/93‑1 (MQ=255)
                gttgttGCGTCTTCGACAGATAGGGAAGTCATGGTCCGTGCGAGTGACAAACGTGGCACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAt                                                                         >  2:7228533/1‑93 (MQ=255)
                gttgttGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAt                                                                         <  1:3291235/93‑1 (MQ=255)
                gttgttGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGCGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAAt                                                                         >  2:1460160/1‑93 (MQ=255)
                 ttgttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATc                                                                        <  1:2554717/93‑1 (MQ=255)
                   gttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCt                                                                      <  2:4859101/93‑1 (MQ=255)
                    ttgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTg                                                                     >  2:1031527/1‑93 (MQ=255)
                     tgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGa                                                                    >  2:3882381/1‑93 (MQ=255)
                     tgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGa                                                                    <  1:7337605/93‑1 (MQ=255)
                     tgCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGa                                                                    <  2:2152401/93‑1 (MQ=255)
                        gTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGc                                                                 >  1:233798/1‑93 (MQ=255)
                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                <  2:6397036/93‑1 (MQ=255)
                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                >  1:6944482/1‑93 (MQ=255)
                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                <  2:6132042/93‑1 (MQ=255)
                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                <  2:7930536/93‑1 (MQ=255)
                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                >  1:4076777/1‑93 (MQ=255)
                         tCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCa                                                                >  1:5916536/1‑93 (MQ=255)
                           ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata                                                              <  2:6016919/93‑1 (MQ=255)
                           ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata                                                              <  2:4604306/93‑1 (MQ=255)
                           ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata                                                              <  2:4698542/93‑1 (MQ=255)
                           ttCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCata                                                              >  2:7308553/1‑93 (MQ=255)
                             cGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtatt                                                            <  1:4885158/93‑1 (MQ=255)
                               aCAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCAtattat                                                          <  1:3065790/93‑1 (MQ=255)
                                cAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATattatt                                                         <  2:1678828/93‑1 (MQ=255)
                                 aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg                                                        <  1:5500580/93‑1 (MQ=255)
                                 aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg                                                        >  2:2749639/1‑93 (MQ=255)
                                 aaaTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTg                                                        <  2:1129687/93‑1 (MQ=255)
                                   aTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggg                                                      <  1:6666331/93‑1 (MQ=255)
                                   aTAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggg                                                      >  1:2925109/1‑93 (MQ=255)
                                    tAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTgggg                                                     >  1:4681299/1‑93 (MQ=255)
                                    tAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTgggg                                                     <  1:7394105/93‑1 (MQ=255)
                                     aGTGAATTCATGGTCCGTGCGAGGGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTggggg                                                    >  2:6052970/1‑93 (MQ=255)
                                       tGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCt                                                  >  1:789814/1‑93 (MQ=255)
                                         aaTTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaa                                                <  2:2621561/93‑1 (MQ=255)
                                             cATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaattaa                                            >  2:7774577/1‑93 (MQ=255)
                                             cATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaattaa                                            <  1:1798583/93‑1 (MQ=255)
                                             cATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaattaa                                            <  1:3565162/93‑1 (MQ=255)
                                              aTGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCtaattaat                                           >  2:3982284/1‑93 (MQ=255)
                                               tGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatg                                          >  2:1968544/1‑93 (MQ=255)
                                               tGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatg                                          >  1:7820649/1‑93 (MQ=255)
                                               tGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatg                                          <  2:3479887/93‑1 (MQ=255)
                                                ggTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatga                                         <  2:7872888/93‑1 (MQ=255)
                                                  tCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatgatg                                       >  2:3944756/1‑93 (MQ=255)
                                                  tCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAatgatg                                       <  1:5036188/93‑1 (MQ=255)
                                                     gTGCGAGTGACAAACATGACACTCAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAg                                    <  2:4353752/93‑1 (MQ=255)
                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   <  2:3307395/93‑1 (MQ=255)
                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   <  2:1666816/93‑1 (MQ=255)
                                                      tGCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGa                                   >  1:3487624/1‑93 (MQ=255)
                                                       gCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAt                                  <  2:5321177/93‑1 (MQ=255)
                                                       gCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAt                                  <  1:4438731/93‑1 (MQ=255)
                                                       gCGAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGAt                                  >  2:1413636/1‑93 (MQ=255)
                                                         gAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGc                                <  2:3573714/93‑1 (MQ=255)
                                                         gAGTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGc                                >  1:1645705/1‑93 (MQ=255)
                                                           gTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctc                              >  2:2768191/1‑93 (MQ=255)
                                                           gTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctc                              <  1:5223714/93‑1 (MQ=255)
                                                           gTGACAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGctc                              <  2:5169437/93‑1 (MQ=255)
                                                            tgtcAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATGAATGATGAAGATGctct                             >  2:7031200/4‑93 (MQ=255)
                                                              aCAAACATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTga                           >  1:3723002/1‑93 (MQ=255)
                                                                 aaCATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaag                        >  2:3832904/1‑93 (MQ=255)
                                                                 aaCATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaag                        <  2:2958345/93‑1 (MQ=255)
                                                                  aCATGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaaga                       <  1:7019113/93‑1 (MQ=255)
                                                                    aTGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaagaaa                     >  2:7137880/1‑93 (MQ=255)
                                                                    aTGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTgaaagaaa                     >  2:1876538/1‑93 (MQ=255)
                                                                     tGACACTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAt                    >  1:1914379/1‑93 (MQ=255)
                                                                       acacTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAttt                  >  1:6423248/1‑93 (MQ=255)
                                                                       acacTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAttt                  >  2:6521015/1‑93 (MQ=255)
                                                                        cacTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAtttt                 <  2:5954976/93‑1 (MQ=255)
                                                                        cacTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAAtttt                 <  2:6466606/93‑1 (MQ=255)
                                                                          cTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTa               >  1:6111238/1‑93 (MQ=255)
                                                                          cTGAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTa               >  1:2770720/1‑93 (MQ=255)
                                                                            gAAAATGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAg             <  1:5397324/93‑1 (MQ=255)
                                                                             aaaaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGc            <  1:2189849/93‑1 (MQ=255)
                                                                               aaTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGATGATGCTCTGAAAGAAATTTTTAAGCGa          >  2:4173957/1‑93 (MQ=255)
                                                                                aTGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGaa         >  1:6099175/1‑93 (MQ=255)
                                                                                 tGTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAg        >  1:1121653/1‑93 (MQ=255)
                                                                                  gTCAAAAAGGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAga       >  1:4576501/1‑92 (MQ=255)
                                                                                     aaaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAat    <  2:7610545/93‑1 (MQ=255)
                                                                                     aaaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAat    <  2:436343/93‑1 (MQ=255)
                                                                                      aaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAata   <  1:1448819/93‑1 (MQ=255)
                                                                                      aaaagGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAata   <  2:2677785/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATAT  >  NC_000913/1473656‑1473835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: