BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,478,094	A→G	G311G (GGA→GGG)	b1410 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,478,094	0	A	G	100.0%	619.8 / NA	202	G311G (GGA→GGG)	b1410	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (89/113); total (89/113)

Only 100 of 208 total aligned reads displayed.

TTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATCT  >  NC_000913/1478004‑1478183

tttATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGcc                                                                                         >  1:6396468/1‑93 (MQ=255)

tttATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGcc                                                                                         >  1:5171775/1‑93 (MQ=255)

 ttATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGccc                                                                                        >  1:1482193/1‑93 (MQ=255)

  tataTGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCg                                                                                       >  2:7505643/1‑93 (MQ=255)

   atatGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGt                                                                                      >  2:5426076/1‑93 (MQ=255)

     atGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGc                                                                                    <  2:1341163/93‑1 (MQ=255)

      tGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGcc                                                                                   >  2:2440668/1‑93 (MQ=255)

       gCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCa                                                                                  <  2:1624224/93‑1 (MQ=255)

        cTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAt                                                                                 <  1:758209/93‑1 (MQ=255)

        cTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAt                                                                                 >  2:367539/1‑93 (MQ=255)

        cTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAt                                                                                 <  1:2570660/93‑1 (MQ=255)

         tAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAtt                                                                                >  2:2323194/1‑93 (MQ=255)

         tAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAtt                                                                                <  1:7843329/93‑1 (MQ=255)

         tAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAtt                                                                                >  2:3179624/1‑93 (MQ=255)

         tAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAtt                                                                                >  1:941658/1‑93 (MQ=255)

          aaCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTa                                                                               <  1:3458025/93‑1 (MQ=255)

          aaCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTa                                                                               >  1:3325405/1‑93 (MQ=255)

           aCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTAt                                                                              <  2:5948892/93‑1 (MQ=255)

           aCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTAt                                                                              >  2:7094466/1‑93 (MQ=255)

           aCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGGGGGCCCGGGCCAttct                                                                              >  1:1676309/1‑91 (MQ=255)

            cAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATc                                                                             <  1:6750150/93‑1 (MQ=255)

             aaaTCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCg                                                                            >  1:5734793/1‑93 (MQ=255)

               aTCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGcc                                                                          >  2:6402976/1‑93 (MQ=255)

               aTCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGcc                                                                          <  1:1090020/93‑1 (MQ=255)

                tCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCg                                                                         <  1:3054110/93‑1 (MQ=255)

                 cGCAAAAATTTTATTATCAGCATGAAGACTGCACAGGACCATCAGCTGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCgg                                                                        <  1:3695354/93‑1 (MQ=255)

                   cAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGtt                                                                      <  2:6247677/93‑1 (MQ=255)

                    aaaaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTg                                                                     >  2:6518833/1‑93 (MQ=255)

                     aaaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGa                                                                    <  1:2171922/93‑1 (MQ=255)

                     aaaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGa                                                                    <  1:6886035/93‑1 (MQ=255)

                     aaaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGa                                                                    <  1:405368/93‑1 (MQ=255)

                       aaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGAtt                                                                  <  2:6079996/93‑1 (MQ=255)

                       aaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGAtt                                                                  <  2:1847622/93‑1 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                                <  1:7649321/93‑1 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCAGCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                                <  1:3713167/93‑1 (MQ=255)

                          ttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAg                                                               <  2:6411705/93‑1 (MQ=255)

                           tGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGc                                                              <  2:7173601/93‑1 (MQ=255)

                            gATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCGTTATCGCCGGTTGATTTAGCg                                                             <  2:7792505/93‑1 (MQ=255)

                            gATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCg                                                             >  2:384995/1‑93 (MQ=255)

                              ttATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTa                                                           >  2:1105442/1‑93 (MQ=255)

                              ttATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGAGTa                                                           >  1:3952580/1‑93 (MQ=255)

                              ttATCAGCATGAAGACGGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTa                                                           <  2:5896984/93‑1 (MQ=255)

                               tATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTAt                                                          <  2:7811130/93‑1 (MQ=255)

                                aTCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATc                                                         <  2:4770925/93‑1 (MQ=255)

                                aTCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATc                                                         <  1:4531849/93‑1 (MQ=255)

                                  cAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGc                                                       <  2:5365028/93‑1 (MQ=255)

                                  cAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGc                                                       <  1:1846262/93‑1 (MQ=255)

                                   aGCATGAAGACTGCACAGGACCCTCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCt                                                      <  1:5678335/93‑1 (MQ=255)

                                     cATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCttt                                                    <  2:5981727/93‑1 (MQ=255)

                                      aTGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTa                                                   >  1:6965881/1‑93 (MQ=255)

                                      aTGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTa                                                   <  2:7664322/93‑1 (MQ=255)

                                      aTGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTa                                                   >  2:1746216/1‑93 (MQ=255)

                                       tGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTTGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTAt                                                  <  2:4183474/93‑1 (MQ=255)

                                       tGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTAt                                                  >  1:503406/1‑93 (MQ=255)

                                          aGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCg                                               <  1:4426530/93‑1 (MQ=255)

                                            aCTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaa                                             <  1:3317437/93‑1 (MQ=255)

                                             cTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaaa                                            <  2:4651941/93‑1 (MQ=255)

                                             cTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaaa                                            <  1:1925587/93‑1 (MQ=255)

                                                cacaGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGc                                         <  1:7362729/93‑1 (MQ=255)

                                                 acaGGACCATCAGAGGATCGATGGCGGCTACTTTCTGGTGAGCCCGTGCCATTATCGACGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCg                                        >  2:5500657/1‑93 (MQ=255)

                                                  caGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGa                                       <  1:532143/93‑1 (MQ=255)

                                                  caGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGa                                       >  1:1739634/1‑93 (MQ=255)

                                                   aGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGAt                                      <  2:4451491/93‑1 (MQ=255)

                                                    ggACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATg                                     >  2:2813660/1‑93 (MQ=255)

                                                     gACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGa                                    <  2:4043513/93‑1 (MQ=255)

                                                     gACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGa                                    >  2:7330411/1‑93 (MQ=255)

                                                       ccATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGaaa                                  >  2:3926119/1‑93 (MQ=255)

                                                       ccATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGaaa                                  <  1:863651/93‑1 (MQ=255)

                                                         aTCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAAtt                                >  2:1642535/1‑93 (MQ=255)

                                                          tCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTg                               <  2:565561/93‑1 (MQ=255)

                                                          tCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTg                               >  2:1215007/1‑93 (MQ=255)

                                                          tCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTg                               >  2:4936057/1‑93 (MQ=255)

                                                          tCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTg                               <  1:2344966/93‑1 (MQ=255)

                                                             gCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGttg                            >  1:7902234/1‑92 (MQ=255)

                                                             gCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTc                            <  1:2993889/93‑1 (MQ=255)

                                                             gCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTc                            >  2:1007553/1‑93 (MQ=255)

                                                              cGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCg                           <  2:5016432/93‑1 (MQ=255)

                                                               ggATCGATGGCGGCTACTTTCTGGTGGGGCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGCAAGGCGATGAAATTGTTCgg                          >  2:522474/1‑93 (MQ=255)

                                                                 aTCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGa                        <  1:1635115/93‑1 (MQ=255)

                                                                 aTCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGa                        >  1:7539883/1‑93 (MQ=255)

                                                                  tCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGag                       >  1:3094422/1‑92 (MQ=255)

                                                                      tggtggCTTCTTTCTGGTGGGCTCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCGTTATGCGAAAGGCGATGAAATTGTGCGGGACGCAc                   <  2:4382470/93‑1 (MQ=255)

                                                                      tGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCAc                   <  1:7489854/93‑1 (MQ=255)

                                                                      tGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCAc                   <  1:2029558/93‑1 (MQ=255)

                                                                      tGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGAAc                   >  1:5636859/1‑93 (MQ=255)

                                                                       ggcggcTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCAct                  >  1:4671225/1‑93 (MQ=255)

                                                                       ggcggcTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCAct                  <  1:1160309/93‑1 (MQ=255)

                                                                          ggcTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCtt               >  1:6160017/1‑93 (MQ=255)

                                                                          ggcTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCtt               <  2:5081669/93‑1 (MQ=255)

                                                                            cTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCg             <  2:6208973/93‑1 (MQ=255)

                                                                            cTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCg             <  1:2398252/93‑1 (MQ=255)

                                                                            cTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCg             <  1:6293152/93‑1 (MQ=255)

                                                                             tACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCgg            >  1:3625159/1‑93 (MQ=255)

                                                                             tACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCgg            >  2:339511/1‑93 (MQ=255)

                                                                                tttCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGcc         <  1:1545678/93‑1 (MQ=255)

                                                                                 ttCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCt        >  2:4538641/1‑93 (MQ=255)

                                                                                    tggtggGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCa     <  1:1404842/93‑1 (MQ=255)

                                                                                    tggtggGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCa     <  1:1240185/93‑1 (MQ=255)

                                                                                     ggtggGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCAt    >  2:2577831/1‑93 (MQ=255)

                                                                                       tggGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCAtct  >  1:5917117/1‑93 (MQ=255)

TTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATCT  >  NC_000913/1478004‑1478183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`