BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,482,154	T→C	V357A (GTA→GCA)	hrpA →	helicase, ATP‑dependent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,482,154	0	T	C	99.5%	616.8 / ‑5.3	203	V357A (GTA→GCA)	hrpA	helicase, ATP‑dependent
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (91/111); total (91/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

Only 100 of 211 total aligned reads displayed.

TTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGC  >  NC_000913/1482064‑1482243

tttCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCAc                                                                                         >  1:4390136/1‑93 (MQ=255)

  tCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCg                                                                                       <  2:2896505/93‑1 (MQ=255)

  tCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCg                                                                                       >  1:2347503/1‑93 (MQ=255)

   cGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCgg                                                                                      <  2:6285509/93‑1 (MQ=255)

    gAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCggg                                                                                     >  2:1078587/1‑93 (MQ=255)

       cAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGAt                                                                                  <  1:4617992/93‑1 (MQ=255)

        aGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGAtt                                                                                 >  2:1931895/1‑93 (MQ=255)

          cGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGAGGAAACGTCGCTGACCGCACCGGGGATTaa                                                                               >  1:633332/1‑93 (MQ=255)

            aaaaaaaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAAt                                                                             <  1:5545199/90‑1 (MQ=255)

            aaCAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAAt                                                                             >  2:2220006/1‑93 (MQ=255)

             aCAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCTGAAACGTCGCTGACCGCACCGGGGATTAAATa                                                                            >  1:7453399/1‑93 (MQ=255)

             aCAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATa                                                                            >  1:1087618/1‑93 (MQ=255)

             aCAAAATAGGGTATTCCACTCGCACAGCGGACGGCGCATTGTGCTGGCCACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATa                                                                            <  2:328192/93‑1 (MQ=255)

               aaaaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGTTTAAATACg                                                                          >  1:7113742/1‑93 (MQ=255)

               aaaaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACg                                                                          >  2:5300216/1‑93 (MQ=255)

                 aaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGtt                                                                        >  2:5875785/1‑93 (MQ=255)

                 aaTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCGGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGtt                                                                        <  2:1639362/93‑1 (MQ=255)

                  aTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTa                                                                       >  2:274848/1‑93 (MQ=255)

                  aTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTa                                                                       >  2:1055749/1‑93 (MQ=255)

                  aTAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTa                                                                       <  1:3611101/93‑1 (MQ=255)

                   tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt                                                                      >  1:6649602/1‑93 (MQ=255)

                   tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt                                                                      >  1:1385417/1‑93 (MQ=255)

                   tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt                                                                      <  1:7520040/93‑1 (MQ=255)

                   tAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt                                                                      <  2:5976503/93‑1 (MQ=255)

                   aaGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTAt                                                                      <  2:2166234/92‑1 (MQ=255)

                    aGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATc                                                                     <  2:3452780/93‑1 (MQ=255)

                    aGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATc                                                                     <  2:480609/93‑1 (MQ=255)

                     gggTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCg                                                                    >  2:5428149/1‑93 (MQ=255)

                       gTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAc                                                                  <  2:4572759/93‑1 (MQ=255)

                       gTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAc                                                                  <  1:7770521/93‑1 (MQ=255)

                       gTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAc                                                                  >  2:3091584/1‑93 (MQ=255)

                        tATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAcc                                                                 >  1:495469/1‑93 (MQ=255)

                         aTTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAccc                                                                <  1:5432679/93‑1 (MQ=255)

                         aTTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAccc                                                                >  1:2100257/1‑93 (MQ=255)

                          ttCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAcccc                                                               >  1:404085/1‑93 (MQ=255)

                          ttCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGAcccc                                                               >  2:6543795/1‑93 (MQ=255)

                             cAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGt                                                            >  1:2946282/1‑93 (MQ=255)

                              aGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCTACCCCGGtc                                                           >  2:4315348/1‑92 (MQ=255)

                              aGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTa                                                           <  1:4182024/93‑1 (MQ=255)

                               gTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTAc                                                          >  1:1320208/1‑93 (MQ=255)

                               gTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTAc                                                          >  1:1930637/1‑93 (MQ=255)

                               gTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTAc                                                          <  1:3187725/93‑1 (MQ=255)

                               gTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACCTTATCGACCCCGGTAc                                                          >  1:7489872/1‑93 (MQ=255)

                                  gCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgc                                                       <  1:1437516/93‑1 (MQ=255)

                                  gCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgc                                                       <  1:658571/93‑1 (MQ=255)

                                   cacaGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgcg                                                      >  1:340073/1‑93 (MQ=255)

                                    acaGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAgcgc                                                     >  2:3353799/1‑93 (MQ=255)

                                     caGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGcgcg                                                    >  2:1396557/1‑93 (MQ=255)

                                       gCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTa                                                  <  2:3493719/93‑1 (MQ=255)

                                       gCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTa                                                  <  2:1888928/93‑1 (MQ=255)

                                       gCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTa                                                  <  2:3187893/93‑1 (MQ=255)

                                          gACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCa                                               <  1:1204161/93‑1 (MQ=255)

                                          gACGGCGCATTGGGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCa                                               <  1:1548806/93‑1 (MQ=255)

                                           gcGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAg                                              <  2:6644105/92‑1 (MQ=255)

                                            cGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGAGCGTATCAGc                                             >  2:5748552/1‑93 (MQ=255)

                                             ggCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGcc                                            >  2:4152704/1‑93 (MQ=255)

                                              gcgcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCg                                           >  1:222041/1‑93 (MQ=255)

                                               cgcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGc                                          <  1:250665/93‑1 (MQ=255)

                                                gcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCt                                         >  1:1047788/1‑93 (MQ=255)

                                                gcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCt                                         >  1:2524356/1‑93 (MQ=255)

                                                gcATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCt                                         >  1:6075083/1‑93 (MQ=255)

                                                 cATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTa                                        <  1:6860785/93‑1 (MQ=255)

                                                 cATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTa                                        <  2:4499775/93‑1 (MQ=255)

                                                  aTTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTAc                                       >  1:838521/1‑93 (MQ=255)

                                                  aTTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTAc                                       <  1:7639128/93‑1 (MQ=255)

                                                  aTTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTAc                                       <  1:3808072/93‑1 (MQ=255)

                                                    tgtgCTGGCGACCAACGTCGCGGCAACGTCGCTGACCGCACCGGGGATTAAATACGTTAGCGACCCCGGTACAGCGCGTATCAGCCGCTACAg                                     <  2:4308826/93‑1 (MQ=255)

                                                    tgtgCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAg                                     >  2:7339642/1‑93 (MQ=255)

                                                     gtgCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGc                                    <  2:7435158/93‑1 (MQ=255)

                                                       gCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTa                                  <  1:3548100/93‑1 (MQ=255)

                                                       gCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTa                                  >  1:4251907/1‑93 (MQ=255)

                                                         tGGCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATc                                >  2:1300606/1‑93 (MQ=255)

                                                          ggCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCg                               <  1:4761263/93‑1 (MQ=255)

                                                          ggCGACCAACGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCg                               >  2:3683609/1‑93 (MQ=255)

                                                                 aaCGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCaaa                        >  2:3895123/1‑93 (MQ=255)

                                                                 aaCGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCaaa                        >  1:5351495/1‑93 (MQ=255)

                                                                 aaCGTCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCaaa                        >  1:7020276/1‑93 (MQ=255)

                                                                     tCGCGGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGc                    <  1:5138213/93‑1 (MQ=255)

                                                                      cgcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCa                   <  2:5374651/93‑1 (MQ=255)

                                                                       gcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAg                  <  2:6981598/93‑1 (MQ=255)

                                                                       gcgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAg                  <  2:5618637/93‑1 (MQ=255)

                                                                        cgGAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGc                 <  2:6465002/93‑1 (MQ=255)

                                                                          gAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGt               >  2:7616556/1‑93 (MQ=255)

                                                                          gAAACGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGt               <  1:7398328/93‑1 (MQ=255)

                                                                          gAAACGTCGCAGACCGCACCGGGGATTAAACACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGt               <  1:3500114/93‑1 (MQ=255)

                                                                           aaaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGtt              <  2:1452045/93‑1 (MQ=255)

                                                                           aaaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGtt              <  1:3314870/93‑1 (MQ=255)

                                                                           aaaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGtt              <  2:7071523/93‑1 (MQ=255)

                                                                            aaCGTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGttt             <  2:3066597/93‑1 (MQ=255)

                                                                               gTCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGcc          <  2:3702680/93‑1 (MQ=255)

                                                                                tCGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCg         <  1:1598761/93‑1 (MQ=255)

                                                                                 cGCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCCGCGTTTGCCGa        >  1:4158333/1‑93 (MQ=255)

                                                                                  gCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAt       <  2:1708492/93‑1 (MQ=255)

                                                                                  gCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAt       >  1:5950062/1‑93 (MQ=255)

                                                                                  gCTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAt       >  2:6813207/1‑93 (MQ=255)

                                                                                   cTGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGAtt      <  1:7720199/93‑1 (MQ=255)

                                                                                    tGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCGGCTACAGATATCGCACCAAAGTGCAGCGTTTGCCGATTg     >  1:6226226/1‑93 (MQ=255)

                                                                                    tGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTg     >  2:6168229/1‑93 (MQ=255)

                                                                                    tGACCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTg     <  1:929310/93‑1 (MQ=255)

                                                                                      aCCGCACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAg   <  1:1078713/93‑1 (MQ=255)

TTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGC  >  NC_000913/1482064‑1482243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`