BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,512,627	T→C	V258A (GTC→GCC)	b1442 →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,512,627	0	T	C	100.0%	594.1 / NA	191	V258A (GTC→GCC)	b1442	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (100/91); total (100/91)

Only 100 of 207 total aligned reads displayed.

CCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGTCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATGGCGGCGG  >  NC_000913/1512537‑1512716

  tttCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCg                                                                                        >  1:7510135/1‑93 (MQ=255)

  tttCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCg                                                                                        >  1:7681868/1‑93 (MQ=255)

   ttCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGc                                                                                       >  1:1642090/1‑93 (MQ=255)

    tCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCa                                                                                      <  1:3020115/93‑1 (MQ=255)

     cGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAg                                                                                     >  2:3463179/1‑93 (MQ=255)

      gCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGc                                                                                    <  1:5350223/93‑1 (MQ=255)

      gCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGc                                                                                    <  2:3858933/93‑1 (MQ=255)

      gCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGACGCTGGCTCTATCTTTACCTTCTCACTCTCACTGGGCGATTTTATCGCCCCGGAGc                                                                                    >  2:5518757/1‑93 (MQ=255)

        tATGTGGTGCTGCCGCTGGCAATCCGGGGTATTGCCGCTGGCTCTATCTTTCCCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtg                                                                                  <  2:1345769/93‑1 (MQ=255)

        tATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtg                                                                                  >  2:2503377/1‑93 (MQ=255)

         ttgtgGGCCTGCCGCTGGCAATCCGGGGTATTGCCGCTGGCTCTATCTTTCCCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtgg                                                                                 <  2:7214011/92‑1 (MQ=255)

          tgtgGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggt                                                                                >  1:1103290/1‑93 (MQ=255)

           gtggtgCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggtt                                                                               >  1:341841/1‑93 (MQ=255)

            tggtgCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCGCCGCAgctggctg                                                                              >  2:5122278/1‑93 (MQ=255)

             ggtgCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggttgg                                                                             <  1:1272175/93‑1 (MQ=255)

              gtgCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggttggt                                                                            >  2:3642488/1‑93 (MQ=255)

                gctgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcc                                                                          >  1:456738/1‑93 (MQ=255)

                  tgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctc                                                                        >  2:1063966/1‑93 (MQ=255)

                  tgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctc                                                                        <  1:1659640/93‑1 (MQ=255)

                  tgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctc                                                                        >  2:7345050/1‑93 (MQ=255)

                   gcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctcc                                                                       <  2:5206586/93‑1 (MQ=255)

                   gcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctcc                                                                       >  1:1185443/1‑93 (MQ=255)

                     cGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                     <  1:5550607/93‑1 (MQ=255)

                      gCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAgg                                                                    >  2:1491921/1‑93 (MQ=255)

                       cTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGa                                                                   >  1:3898440/1‑93 (MQ=255)

                       cTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGa                                                                   <  1:1757438/93‑1 (MQ=255)

                        tGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGat                                                                  >  2:7377996/1‑93 (MQ=255)

                         ggCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGata                                                                 >  1:6386593/1‑93 (MQ=255)

                         ggCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGata                                                                 >  2:4934394/1‑93 (MQ=255)

                         gccAACCCGGGGTTTTCCCGCTGACTTTATCTTTCCCTTCTCACTCACACTGGGCGTTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGata                                                                 <  2:4300325/91‑1 (MQ=255)

                          gCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGatat                                                                <  1:753976/93‑1 (MQ=255)

                           cAATCCCGGGTATTCCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATAtt                                                               <  2:258336/93‑1 (MQ=255)

                             aTCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATAtttt                                                             >  1:2028315/1‑93 (MQ=255)

                              tCCGGGGTCTTGCCGCTGGCTTTATCTTTGCCTTCTCACTCGCCCGGGGCGTTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTa                                                            <  2:5872157/93‑1 (MQ=255)

                                ccGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATc                                                          <  2:7893830/93‑1 (MQ=255)

                                 cGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCg                                                         <  2:4649050/93‑1 (MQ=255)

                                  gggTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCgg                                                        >  1:5018350/1‑93 (MQ=255)

                                  gggTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCgg                                                        >  1:2527823/1‑93 (MQ=255)

                                    gTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCa                                                      >  2:6885563/1‑93 (MQ=255)

                                     tATTGCCGCTGTCTCTATCTTTACCTTCTCGCTCACACGGGGTGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCaa                                                     <  1:3272972/93‑1 (MQ=255)

                                      aTTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAat                                                    >  2:5641427/1‑93 (MQ=255)

                                       ttGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAata                                                   <  1:4823560/93‑1 (MQ=255)

                                       ttGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAata                                                   <  1:2584836/93‑1 (MQ=255)

                                       ttGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAata                                                   >  1:243497/1‑93 (MQ=255)

                                         tccGCTGGGTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATg                                                 <  2:5314582/92‑1 (MQ=255)

                                           cGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGt                                               >  1:3472560/1‑93 (MQ=255)

                                           cGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGCTGGTCCTCCAGGATATTTTATCGGGAATATGGt                                               >  1:784970/1‑93 (MQ=255)

                                            gCTGGCTCTATCTTTCCCTTCTCACTCACACGGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGtt                                              <  1:6068908/93‑1 (MQ=255)

                                            gCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGtt                                              <  1:627243/93‑1 (MQ=255)

                                            ccTGGCTTCATCTTTACCCTCTCACTCCCACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGtt                                              <  2:3379688/92‑1 (MQ=255)

                                             cTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGttt                                             <  2:6890189/93‑1 (MQ=255)

                                              tGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTa                                            <  2:3478384/93‑1 (MQ=255)

                                              tGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTa                                            <  2:1874902/93‑1 (MQ=255)

                                               ggCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTAt                                           >  1:1494620/1‑93 (MQ=255)

                                                 ctctATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTc                                         <  1:269990/93‑1 (MQ=255)

                                                  tctATCTTTCCCTGCTCCCTCTCCCTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTcc                                        <  1:7094753/93‑1 (MQ=255)

                                                   ctATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTccc                                       >  1:7462348/1‑93 (MQ=255)

                                                   ctATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTccc                                       >  1:6710589/1‑93 (MQ=255)

                                                    tATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCca                                      <  1:2505140/93‑1 (MQ=255)

                                                    tATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCca                                      >  1:1417412/1‑93 (MQ=255)

                                                     aTCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcag                                     >  1:4202514/1‑93 (MQ=255)

                                                     aTCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGGTGGTCCTCCAGGATATTTTATCGGCGATATGGTTTAGTCTcat                                     >  2:503426/1‑92 (MQ=255)

                                                      tCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcagc                                    >  2:3972703/1‑93 (MQ=255)

                                                      tCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcagc                                    <  2:6234992/93‑1 (MQ=255)

                                                       cTTTCCCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcagca                                   <  2:1810122/93‑1 (MQ=255)

                                                       cTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcagca                                   >  1:3394786/1‑93 (MQ=255)

                                                        tttACCTCCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcagca‑g                                 <  2:4470338/93‑1 (MQ=255)

                                                         ttACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑gg                                <  2:3451230/93‑1 (MQ=255)

                                                          tACCTTCTCGTCCACAGGGGGCCATTTTATCGCTCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑ggg                               <  2:4352828/93‑1 (MQ=255)

                                                          tACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑ggg                               >  1:4359997/1‑93 (MQ=255)

                                                          tACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑ggg                               <  2:4103000/93‑1 (MQ=255)

                                                           aCCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑gggg                              <  1:6978997/93‑1 (MQ=255)

                                                            ccTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGCTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑ggggg                             >  1:3119271/1‑93 (MQ=255)

                                                              ttCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCg                           >  1:875120/1‑93 (MQ=255)

                                                               tctcACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGa                          >  2:6133767/1‑93 (MQ=255)

                                                                ctcactcaCACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGAt                         >  2:7057591/1‑93 (MQ=255)

                                                                 tcactcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGAtt                        >  1:2784141/1‑93 (MQ=255)

                                                                 tcactcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGAtt                        <  1:4645159/93‑1 (MQ=255)

                                                                  cactcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGGCGAtt                        <  2:1380765/93‑1 (MQ=255)

                                                                    ctcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGc                     <  2:3061868/93‑1 (MQ=255)

                                                                    ctcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGc                     >  1:3086078/1‑93 (MQ=255)

                                                                    ctcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGc                     >  2:2238439/1‑93 (MQ=255)

                                                                     tcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCa                    >  1:3674140/1‑93 (MQ=255)

                                                                     tcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCa                    >  1:5626555/1‑93 (MQ=255)

                                                                        ccgggggCGTTTTTATCCCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAata                 <  2:1599314/89‑1 (MQ=255)

                                                                         acTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAatat                >  1:1552914/1‑93 (MQ=255)

                                                                         acTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAatat                >  2:6182795/1‑93 (MQ=255)

                                                                           tGGGCGGTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGc              >  2:7785157/1‑93 (MQ=255)

                                                                            gggCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGcc             >  2:2068037/1‑93 (MQ=255)

                                                                            gggCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGcc             <  1:187758/93‑1 (MQ=255)

                                                                              gCGTTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTGTTCCCAGCA‑GGGGGCGATTGGCAATATGCCgg           <  1:7040790/93‑2 (MQ=255)

                                                                              gCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGa           <  1:511320/93‑1 (MQ=255)

                                                                               gaaTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGTCGATTGGCAATATGCCGAt          <  1:7664385/91‑1 (MQ=255)

                                                                                 aTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATgg        >  2:6739454/1‑93 (MQ=255)

                                                                                 aTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATgg        >  2:2106857/1‑93 (MQ=255)

                                                                                  ttttATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATggc       <  2:1255384/93‑1 (MQ=255)

                                                                                  ttttATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATggc       <  1:6638200/93‑1 (MQ=255)

                                                                                   tttATCGCCCCGGAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATggcg      <  1:2226050/93‑1 (MQ=255)

                                                                                   tttATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATggcg      >  1:5823022/1‑93 (MQ=255)

                                                                                     tATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATggcggc    >  2:1031115/1‑93 (MQ=255)

CCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGTCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCA‑GGGGGCGATTGGCAATATGCCGATGGCGGCGG  >  NC_000913/1512537‑1512716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`