BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,531,361	T→C	H188R (CAT→CGT)	b1462 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,531,361	0	T	C	99.4%	523.7 / ‑6.6	167	H188R (CAT→CGT)	b1462	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (110/56); total (111/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 173 total aligned reads displayed.

GCTTTGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531271‑1531450

gCTTTGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGc                                                                                         >  1:7173715/1‑93 (MQ=255)

  tttGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCCGCACCTAAATGACGCaa                                                                                       >  1:6592488/1‑93 (MQ=255)

  tttGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  1:3241593/1‑93 (MQ=255)

  tttGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCaa                                                                                       >  1:3241592/1‑93 (MQ=255)

   ttGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAAc                                                                                      >  1:1108432/1‑93 (MQ=255)

    taaaaaaaaaACCTTGTTAAAAGCATGAATCTTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAAc                                                                                      <  2:3798882/89‑1 (MQ=255)

       tAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAt                                                                                  >  2:4502845/1‑93 (MQ=255)

       aaaaaaaACCTGGTTAAAAGAATAAATCCCTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTa                                                                                   <  2:6466469/92‑1 (MQ=255)

        aaaGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  2:4056505/1‑93 (MQ=255)

        aaaGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTAtt                                                                                 >  1:1734853/1‑93 (MQ=255)

         aaGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                >  1:2742752/1‑93 (MQ=255)

         aaGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                >  2:2019322/1‑93 (MQ=255)

         aaGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                >  2:1072216/1‑93 (MQ=255)

         aaGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTg                                                                                >  1:3279383/1‑93 (MQ=255)

          aGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGa                                                                               >  2:4894471/1‑93 (MQ=255)

            aaaCCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGc                                                                             >  1:4643199/1‑93 (MQ=255)

             aaCCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCt                                                                            >  2:3272015/1‑93 (MQ=255)

                ttgttt‑ATAGGATGAATGCTAACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTat                                                                         <  2:6332167/89‑1 (MQ=255)

                cTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTat                                                                         >  1:832881/1‑93 (MQ=255)

                cTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTat                                                                         >  2:4867745/1‑93 (MQ=255)

                    tt‑ATAGAATGAATGCTTCCCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatc                                                                     <  1:5194933/93‑1 (MQ=255)

                     t‑ataGCATGAATTCTTCCCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatcc                                                                    <  2:4794902/93‑2 (MQ=255)

                     t‑ataCCATAAACGCTAACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatca                                                                    <  1:7431936/93‑1 (MQ=255)

                        taGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTatcatcatc                                                                  >  1:4461549/1‑93 (MQ=255)

                         aGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTAtcatcatca                                                                 >  2:370632/1‑93 (MQ=255)

                         aGCATAAATCCTAACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTAtcatcatca                                                                 <  2:7575204/93‑1 (MQ=255)

                           cATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGGATTGAGCTTATCATCATCaaa                                                               >  2:2991884/1‑93 (MQ=255)

                            aTGAATCCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAAc                                                              <  2:620461/93‑1 (MQ=255)

                                aTGCTTCCCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGcc                                                          <  2:4745464/93‑1 (MQ=255)

                                aTGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGATTATCATCATCAAACTGcc                                                          >  1:554185/1‑93 (MQ=255)

                                aTGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGcc                                                          >  1:7907278/1‑93 (MQ=255)

                                aTGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGca                                                          >  1:5800301/1‑92 (MQ=255)

                                 tGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCa                                                         >  1:1338829/1‑93 (MQ=255)

                                 tGCTCACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCa                                                         <  2:1090108/93‑1 (MQ=255)

                                  gCTTACCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAg                                                        <  2:5260653/93‑1 (MQ=255)

                                  gCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAg                                                        >  2:1014228/1‑93 (MQ=255)

                                   cTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGc                                                       >  1:3721699/1‑93 (MQ=255)

                                    ttAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      >  2:7450526/1‑93 (MQ=255)

                                    ttAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      >  1:3686729/1‑93 (MQ=255)

                                    ttAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      >  1:213379/1‑93 (MQ=255)

                                    ttAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCg                                                      >  1:2811309/1‑93 (MQ=255)

                                      cccccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGc                                                    <  1:1569481/91‑1 (MQ=255)

                                      aaCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCCGCGGc                                                    >  2:1976985/1‑93 (MQ=255)

                                      aaCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGc                                                    >  1:4717178/1‑93 (MQ=255)

                                       aCCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGcc                                                   >  1:2661777/1‑93 (MQ=255)

                                        cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  >  1:5852097/1‑93 (MQ=255)

                                        cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGAATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  >  1:5852096/1‑93 (MQ=255)

                                        cccGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGAAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCt                                                  <  2:5075219/93‑1 (MQ=255)

                                           gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  1:3707882/1‑93 (MQ=255)

                                           gccgTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCg                                               >  1:2804232/1‑93 (MQ=255)

                                              gTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACa                                            >  2:7270617/1‑93 (MQ=255)

                                               tAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaa                                           >  2:1830479/1‑93 (MQ=255)

                                               tAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaa                                           <  2:1013456/93‑1 (MQ=255)

                                                aaCACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACaaa                                          >  2:6207127/1‑93 (MQ=255)

                                                 acacGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAAt                                         >  1:7286339/1‑93 (MQ=255)

                                                    cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  1:5219637/1‑93 (MQ=255)

                                                    cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  2:5445024/1‑93 (MQ=255)

                                                    cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      <  1:1897734/93‑1 (MQ=255)

                                                    cGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAcc                                      >  2:2881308/1‑93 (MQ=255)

                                                     gCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATAccc                                     >  2:7513231/1‑93 (MQ=255)

                                                      cTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCg                                    >  1:1241148/1‑93 (MQ=255)

                                                      cTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCg                                    <  1:3760836/93‑1 (MQ=255)

                                                       ttGCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGt                                   <  1:5265694/93‑1 (MQ=255)

                                                         gCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGc                                 <  1:3474676/93‑1 (MQ=255)

                                                         gCCGCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGc                                 <  1:3785180/93‑1 (MQ=255)

                                                            gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  1:3498563/93‑1 (MQ=255)

                                                            gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              <  1:6058962/93‑1 (MQ=255)

                                                            gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              >  1:3859661/1‑93 (MQ=255)

                                                            gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              >  1:4353280/1‑93 (MQ=255)

                                                            gCTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTc                              >  2:4589381/1‑93 (MQ=255)

                                                             cTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCt                             >  2:1729392/1‑93 (MQ=255)

                                                             cTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCt                             >  1:6723227/1‑93 (MQ=255)

                                                             cTGGTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCt                             <  1:1072216/93‑1 (MQ=255)

                                                               ggTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGc                           <  1:5020474/93‑1 (MQ=255)

                                                                gTAACAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGcc                          >  1:6538291/1‑93 (MQ=255)

                                                                  aaCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgc                        <  2:6610988/93‑1 (MQ=255)

                                                                  aaCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgc                        >  1:4182118/1‑93 (MQ=255)

                                                                   aCAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgct                       >  1:5328065/1‑93 (MQ=255)

                                                                    cAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctg                      >  2:4358079/1‑93 (MQ=255)

                                                                    cAAACGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctg                      <  2:3384474/93‑1 (MQ=255)

                                                                      aaCGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCgctgct                    <  2:5729534/93‑1 (MQ=255)

                                                                        cGTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATCCCCGTGCGTCTGCCGCTGCTGa                  <  2:657087/93‑1 (MQ=255)

                                                                         gTCCCAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAt                 >  2:3011965/1‑93 (MQ=255)

                                                                          gcccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAta                <  1:5756285/92‑1 (MQ=255)

                                                                           cccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtac               >  2:3043268/1‑93 (MQ=255)

                                                                           cccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtac               <  2:17135/93‑1 (MQ=255)

                                                                           cccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtac               >  1:664536/1‑93 (MQ=255)

                                                                            ccAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtact              <  1:2487988/93‑1 (MQ=255)

                                                                             cAGCACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGAtacta             <  2:3655222/93‑1 (MQ=255)

                                                                                cACCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACtt          >  1:3621410/1‑93 (MQ=255)

                                                                                 cccTAAATGACGCATCGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         <  2:5098352/92‑1 (MQ=255)

                                                                                 aCCTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTc         >  2:3629579/1‑93 (MQ=255)

                                                                                  ccTAAATGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCg        >  2:7071332/1‑93 (MQ=255)

                                                                                     aaaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCa     >  1:4849444/1‑93 (MQ=255)

                                                                                     aaaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCa     >  1:6139922/1‑93 (MQ=255)

                                                                                      aaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaa    >  1:7555011/1‑93 (MQ=255)

                                                                                      aaTGACGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaa    >  2:3920638/1‑93 (MQ=255)

                                                                                       atgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCaaa   <  2:832881/93‑1 (MQ=255)

                                                                                        tgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAc  <  1:1474315/93‑1 (MQ=255)

                                                                                        tgacgCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAc  <  1:6914311/93‑1 (MQ=255)

GCTTTGATAAAGAAACCTGGTT‑ATAGCATGAATGCTTAACCCGCCGTAACACGCTTGCCGCTGGTAACAAACGTCCCAGCACCTAAATGATGCAACGTATTGAGCTTATCATCATCAAACTGCCAGCGGCCTTCGACAAATACCCGTGCGTCTGCCGCTGCTGATACTACTTCGCCAAAC  >  NC_000913/1531271‑1531450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`