BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,533,355	G→A	A176A (GCC→GCT)	yddE ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,533,355	0	G	A	100.0%	831.0 / NA	231	A176A (GCC→GCT)	yddE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (94/137); total (94/137)

Only 100 of 234 total aligned reads displayed.

GTTTTTGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGGGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAATATC  >  NC_000913/1533265‑1533444

 tttttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCg                                                                                        >  1:7895245/1‑93 (MQ=255)

    ttGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCg                                                                                     >  1:866139/1‑93 (MQ=255)

     tGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGa                                                                                    <  2:2817662/93‑1 (MQ=255)

     tGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGa                                                                                    <  1:1647476/93‑1 (MQ=255)

     tGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGa                                                                                    <  1:4457567/93‑1 (MQ=255)

      gCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGat                                                                                   <  2:6692724/93‑1 (MQ=255)

       ccTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGata                                                                                  >  1:2335859/1‑93 (MQ=255)

       ccTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGata                                                                                  <  1:3448060/93‑1 (MQ=255)

         tGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATc                                                                                >  2:7257139/1‑93 (MQ=255)

            gCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCAc                                                                             <  1:5673475/93‑1 (MQ=255)

             cGGATCTGGACCGGGCAGACACCATTGCAGCCAATCTTTTTGCTGATGGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCCCt                                                                            <  2:7016834/93‑1 (MQ=255)

              ggATCTGGAACGGGAAGAAACCATTGCGGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACtt                                                                           <  2:4718104/93‑1 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          >  1:5535819/1‑93 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          <  1:5830379/93‑1 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          <  2:1215253/93‑1 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          <  2:7157097/93‑1 (MQ=255)

               gATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTc                                                                          <  2:7176894/93‑1 (MQ=255)

                 tCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCg                                                                        >  1:2947508/1‑93 (MQ=255)

                 tCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCg                                                                        >  2:4235006/1‑93 (MQ=255)

                 tCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCg                                                                        <  2:6116052/93‑1 (MQ=255)

                 tCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCg                                                                        <  1:616376/93‑1 (MQ=255)

                  cTGGAACGGGAAGAGACTATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCgg                                                                       <  2:2496940/93‑1 (MQ=255)

                  cTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCgg                                                                       >  2:2275479/1‑93 (MQ=255)

                   tGGAACGGGAAGAAACCATTGCGGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGt                                                                      <  2:2547909/93‑1 (MQ=255)

                   tGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGt                                                                      <  1:5576609/93‑1 (MQ=255)

                    ggAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGtt                                                                     >  2:2337407/1‑93 (MQ=255)

                     gagcGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGttt                                                                    <  1:6209163/90‑1 (MQ=255)

                     gAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGttt                                                                    >  1:1296269/1‑93 (MQ=255)

                        cGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAg                                                                 <  1:3388757/93‑1 (MQ=255)

                        cGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAg                                                                 <  1:1015020/93‑1 (MQ=255)

                        cGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAg                                                                 <  2:6244812/93‑1 (MQ=255)

                        cGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAg                                                                 >  1:4083135/1‑93 (MQ=255)

                         gggAAGAAACCATTGCAGCCATTCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGt                                                                >  1:3896569/1‑93 (MQ=255)

                         gggAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGATCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGt                                                                <  2:5370976/93‑1 (MQ=255)

                          ggAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTg                                                               <  2:3322676/93‑1 (MQ=255)

                             agaaACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGa                                                            >  1:5992885/1‑93 (MQ=255)

                               aaaCCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatc                                                          >  2:4568398/1‑93 (MQ=255)

                                agccATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatca                                                         <  1:2753050/91‑1 (MQ=255)

                                aaCCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatca                                                         <  1:891791/93‑1 (MQ=255)

                                aaCCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatca                                                         <  2:752595/93‑1 (MQ=255)

                                  ccATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatcatc                                                       >  1:5411338/1‑93 (MQ=255)

                                  ccATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGatcatc                                                       >  1:2842296/1‑93 (MQ=255)

                                   cATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGAtcatca                                                      >  2:1078617/1‑93 (MQ=255)

                                    aTTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCAc                                                     >  1:2529276/1‑93 (MQ=255)

                                    aTTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCAc                                                     >  2:4424095/1‑93 (MQ=255)

                                    aTTGCAGCCAATCTTGTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCAc                                                     <  2:762800/93‑1 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    >  2:3135770/1‑93 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    >  2:3947498/1‑93 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    >  1:248788/1‑93 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    >  1:5298734/1‑93 (MQ=255)

                                     ttGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACt                                                    <  1:7853404/93‑1 (MQ=255)

                                      tGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACtt                                                   <  2:6828028/93‑1 (MQ=255)

                                        cAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACtttt                                                 >  1:1489522/1‑93 (MQ=255)

                                          gCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGa                                               <  2:4924499/93‑1 (MQ=255)

                                          gCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGa                                               <  2:6451526/93‑1 (MQ=255)

                                           ccAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAg                                              <  1:4347903/93‑1 (MQ=255)

                                            cAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAgt                                             >  1:4282626/1‑93 (MQ=255)

                                            cAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAgt                                             <  1:4793248/93‑1 (MQ=255)

                                               tCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTc                                          <  1:707551/93‑1 (MQ=255)

                                                cTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCTGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTcc                                         <  1:7638589/93‑1 (MQ=255)

                                                cTTTGTGCTGATAGCTGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTcc                                         <  2:1386438/93‑1 (MQ=255)

                                                   tttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgt                                      >  1:6761858/1‑93 (MQ=255)

                                                   tttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgt                                      >  2:3563168/1‑93 (MQ=255)

                                                   tttGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgt                                      <  2:6763238/93‑1 (MQ=255)

                                                     tGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgttg                                    <  2:4282308/93‑1 (MQ=255)

                                                     tGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCtgttg                                    >  1:971558/1‑93 (MQ=255)

                                                       cTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCTCTTCCGGTTTCAGTGGAATCATCACTTTTGAGTGTCCTgttgtt                                  <  2:2114674/93‑1 (MQ=255)

                                                       cTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTgttgtt                                  <  2:1613628/93‑1 (MQ=255)

                                                        tGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGttgttg                                 >  2:1624355/1‑93 (MQ=255)

                                                        tGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGttgttg                                 >  2:1059127/1‑93 (MQ=255)

                                                        tGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGttgttg                                 >  2:2921034/1‑93 (MQ=255)

                                                         taTAGCGGGCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGc                                <  1:2124868/92‑1 (MQ=255)

                                                         gATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGc                                <  1:1335078/93‑1 (MQ=255)

                                                         gATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGc                                <  1:3578101/93‑1 (MQ=255)

                                                           tAGCGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCa                              >  2:1831248/1‑93 (MQ=255)

                                                              cGGTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCt                           <  1:5138283/93‑1 (MQ=255)

                                                               ggTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTg                          >  2:6422935/1‑93 (MQ=255)

                                                                gTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGa                         >  2:7869377/1‑93 (MQ=255)

                                                                gTCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGa                         <  1:6737264/93‑1 (MQ=255)

                                                                 tCAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGaa                        <  2:5856701/93‑1 (MQ=255)

                                                                 gcAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGaa                        <  2:5597885/92‑1 (MQ=255)

                                                                 gcAGCGCATTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGaa                        <  1:6170397/92‑1 (MQ=255)

                                                                        aTTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCaa                 >  2:6036597/1‑93 (MQ=255)

                                                                        aTTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCaa                 >  2:5101442/1‑93 (MQ=255)

                                                                        aTTAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCaa                 <  1:3774230/93‑1 (MQ=255)

                                                                         ttAAGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAg                >  1:6448171/1‑93 (MQ=255)

                                                                           aaGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGcc              <  1:208232/93‑1 (MQ=255)

                                                                           aaGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGcc              <  1:2147179/93‑1 (MQ=255)

                                                                            aGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCt             >  2:5248469/1‑93 (MQ=255)

                                                                            aGGTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCt             >  2:3756751/1‑93 (MQ=255)

                                                                             ggTCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTg            <  1:5697077/93‑1 (MQ=255)

                                                                               tCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGc          <  2:773644/93‑1 (MQ=255)

                                                                               tCAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGc          <  1:2401397/93‑1 (MQ=255)

                                                                                cAGGCGAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCa         <  1:7824533/93‑1 (MQ=255)

                                                                                     gAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAata    >  1:7272234/1‑93 (MQ=255)

                                                                                     gAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAata    <  1:5913590/93‑1 (MQ=255)

                                                                                     gAAAGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAata    <  2:5728785/93‑1 (MQ=255)

                                                                                      aaaGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAatat   >  2:1543121/1‑93 (MQ=255)

                                                                                      aaaGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAatat   <  1:6078122/93‑1 (MQ=255)

                                                                                       aaGAGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAATATc  <  2:2231417/93‑1 (MQ=255)

GTTTTTGCCTGGGCGGATCTGGAACGGGAAGAAACCATTGCAGCCAATCTTTTTGCTGATAGCGGTCAGCGCATTAAGGTCAGGCGAAAGGGCGTCGATATCCACTTCCGGTTTCAGTGGGATCATCACTTTTGAGTGTCCTGTTGTTGCCACCTGAATTGGCAAGCCTGGCAGAATATC  >  NC_000913/1533265‑1533444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`