BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,587,161	T→C	I289V (ATT→GTT)	b1505 ←	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,587,161	0	T	C	100.0%	742.5 / NA	231	I289V (ATT→GTT)	b1505	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/117); total (114/117)

Only 100 of 233 total aligned reads displayed.

CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT  >  NC_000913/1587071‑1587250

cAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAg                                                                                         <  2:2470248/93‑1 (MQ=255)

  aTTGCACCGAATGGAACGCTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCa                                                                                       <  1:4249428/93‑1 (MQ=255)

   ttGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCAc                                                                                      >  2:5239577/1‑93 (MQ=255)

   ttGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCAc                                                                                      <  2:1379362/93‑1 (MQ=255)

      cACCGAATGGAACGCTCTTATTACCGTACTTCAACGTAATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGt                                                                                   <  2:6270060/93‑1 (MQ=255)

       aCCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTg                                                                                  >  2:5867854/1‑93 (MQ=255)

       aCCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTg                                                                                  >  1:1547515/1‑93 (MQ=255)

        ccGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGa                                                                                 <  2:6963141/93‑1 (MQ=255)

          gAATGGAACGCTCTTATTACCGTCCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               <  2:7807095/93‑1 (MQ=255)

          gAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               >  1:1715894/1‑93 (MQ=255)

          gAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               >  1:6420719/1‑93 (MQ=255)

          gAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGt                                                                               <  2:2789702/93‑1 (MQ=255)

           aaTGGAACGCTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              <  1:3499590/93‑1 (MQ=255)

           aaTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              <  1:3097876/93‑1 (MQ=255)

           aaTGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGtt                                                                              >  1:2210487/1‑93 (MQ=255)

              ggAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTggg                                                                           >  1:7265905/1‑93 (MQ=255)

               gAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGa                                                                          >  1:4694405/1‑93 (MQ=255)

               gAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGa                                                                          >  2:3606889/1‑93 (MQ=255)

               gAACCCTCTTTTTACCTTATGTCAACGTAATTAATTCTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGa                                                                          <  2:3147798/93‑1 (MQ=255)

                aaCGCTCTTATTCCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAt                                                                         <  1:1013809/93‑1 (MQ=255)

                aaCGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGAt                                                                         >  2:3945450/1‑93 (MQ=255)

                  cGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGa                                                                       >  1:6687756/1‑93 (MQ=255)

                   cctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAc                                                                      <  2:7546335/92‑1 (MQ=255)

                    ctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACa                                                                     >  2:2297685/1‑93 (MQ=255)

                    ctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACa                                                                     >  1:745860/1‑93 (MQ=255)

                    ctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACa                                                                     <  2:2387816/93‑1 (MQ=255)

                    ctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACa                                                                     <  2:1198866/93‑1 (MQ=255)

                    ctctTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACa                                                                     >  2:4896868/1‑93 (MQ=255)

                     tctTATTACCCTCCTTCAACGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCCCCGTGAGTTGGGATGACAg                                                                    <  1:2225575/93‑1 (MQ=255)

                      tttattaCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   <  1:2298583/92‑1 (MQ=255)

                      ctTATTACCGTACTCCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGt                                                                   <  1:1360649/93‑1 (MQ=255)

                         attcCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGAc                                                                <  1:5172071/93‑1 (MQ=255)

                         attcCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGAc                                                                <  1:1882557/93‑1 (MQ=255)

                           taCCGTCCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCa                                                              <  1:3836702/93‑1 (MQ=255)

                           taCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCa                                                              <  1:6173119/93‑1 (MQ=255)

                           taCCGTACTGCAACTTCATTAATCGTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCa                                                              <  2:2669063/93‑1 (MQ=255)

                            aCCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCAc                                                             <  2:7340623/93‑1 (MQ=255)

                             ccGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACg                                                            >  1:1120254/1‑93 (MQ=255)

                              cGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACgg                                                           <  2:4964834/93‑1 (MQ=255)

                              cGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACgg                                                           >  1:327152/1‑93 (MQ=255)

                              cGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACgg                                                           <  2:5420372/93‑1 (MQ=255)

                                tACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACgggt                                                         >  1:5758416/1‑91 (MQ=255)

                                tACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGtt                                                         <  1:1969812/93‑1 (MQ=255)

                                 aCTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGttt                                                        <  2:3347470/93‑1 (MQ=255)

                                 aCTTCAACGTCATTAATACTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGAGAGTGACCACGGttt                                                        <  1:4627069/93‑1 (MQ=255)

                                  cTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGtttg                                                       >  1:7886813/1‑92 (MQ=255)

                                  cTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTc                                                       >  2:1639886/1‑93 (MQ=255)

                                   ttCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCa                                                      <  2:5758246/93‑1 (MQ=255)

                                   ttCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCa                                                      >  1:1183099/1‑93 (MQ=255)

                                    tCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAt                                                     <  1:4417658/93‑1 (MQ=255)

                                    tCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAt                                                     >  1:3689388/1‑93 (MQ=255)

                                    tCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCAt                                                     >  2:20255/1‑93 (MQ=255)

                                       aCGTCATTAATCCTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCa                                                  <  2:6348755/93‑1 (MQ=255)

                                       aCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCa                                                  <  2:1303451/93‑1 (MQ=255)

                                       aCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCa                                                  <  2:4083617/93‑1 (MQ=255)

                                       aCGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCa                                                  <  2:5274670/93‑1 (MQ=255)

                                        cGTCATTAATCCTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAg                                                 <  2:2557138/93‑1 (MQ=255)

                                        cGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAg                                                 <  1:7336173/93‑1 (MQ=255)

                                          tCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGtt                                               >  1:2537465/1‑93 (MQ=255)

                                          tCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGtt                                               >  2:7357856/1‑93 (MQ=255)

                                            aTTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCa                                             >  2:5583539/1‑93 (MQ=255)

                                            aTTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCa                                             >  2:7285640/1‑93 (MQ=255)

                                             ttAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCaa                                            >  1:99642/1‑93 (MQ=255)

                                              tAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAAc                                           <  2:6040652/93‑1 (MQ=255)

                                                atccTTCCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAt                                         <  2:66394/90‑1 (MQ=255)

                                                aTACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAt                                         >  2:5031727/1‑93 (MQ=255)

                                                aTACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACAt                                         >  2:3640726/1‑93 (MQ=255)

                                                    ttccccGCCGATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATc                                     <  2:5921166/90‑1 (MQ=255)

                                                        ccgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCa                                 >  2:234619/1‑93 (MQ=255)

                                                         cgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                <  1:1636024/93‑1 (MQ=255)

                                                         cgccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCaa                                <  1:881362/93‑1 (MQ=255)

                                                          gccgATTTGTGCATTAAATGTTGCTCTTTTTACAGCACCGTGAGTTGGGATGACAGTGACCTTGGTTTCATCCAGTTCAACATTATCTGCAAg                               >  1:6010158/1‑93 (MQ=255)

                                                           ccgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAgg                              >  2:4258650/1‑93 (MQ=255)

                                                            cgATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAggg                             <  1:2635089/93‑1 (MQ=255)

                                                             gATTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAATGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGa                            >  2:2244948/1‑93 (MQ=255)

                                                              aTTTGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGaa                           <  2:5192937/93‑1 (MQ=255)

                                                               tttGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCACCATTATCTGCAAGGGAAt                          >  2:7870289/1‑93 (MQ=255)

                                                               tttGTGCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAAt                          >  1:7475571/1‑93 (MQ=255)

                                                                 tgtgCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTc                        <  1:3642175/93‑1 (MQ=255)

                                                                 tgtgCATTAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTc                        >  1:7697393/1‑93 (MQ=255)

                                                                       ttAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTa                  >  1:7202271/1‑93 (MQ=255)

                                                                       ttAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTa                  >  2:6334706/1‑93 (MQ=255)

                                                                       ttAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTa                  >  2:7832537/1‑93 (MQ=255)

                                                                        tAAATGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTaa                 <  1:5970318/93‑1 (MQ=255)

                                                                          aaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAaga               <  2:288208/93‑1 (MQ=255)

                                                                          aaTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAaga               <  2:6797521/93‑1 (MQ=255)

                                                                           aTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAagag              <  1:5217440/93‑1 (MQ=255)

                                                                           aTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAagag              <  1:5269887/93‑1 (MQ=255)

                                                                           aTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAagag              <  1:5507327/93‑1 (MQ=255)

                                                                           aTGTTGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAagag              >  2:7033781/1‑93 (MQ=255)

                                                                              ttGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCaa           <  1:6756582/93‑1 (MQ=255)

                                                                              ttGCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCaa           <  2:3362214/93‑1 (MQ=255)

                                                                                gCTCTGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAaca         <  1:4729032/93‑1 (MQ=255)

                                                                                  tctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg       >  2:6528436/1‑93 (MQ=255)

                                                                                  tctGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACg       >  1:319544/1‑93 (MQ=255)

                                                                                    tGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGt     >  2:4545888/1‑93 (MQ=255)

                                                                                    tGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGt     >  1:5800775/1‑93 (MQ=255)

                                                                                    tGGCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGt     >  2:1866302/1‑93 (MQ=255)

                                                                                      gCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGttt   >  1:2741266/1‑93 (MQ=255)

                                                                                      gCAACAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGttt   <  1:4074991/93‑1 (MQ=255)

CAATTGCACCGAATGGAACGCTCTTATTACCGTACTTCAACGTCATTAATACTTTCCCGCCGATTTGTGCATTAAATGTTGCTCTGGCAATAGCACCGTGAGTTGGGATGACAGTGACCACGGTTTCATCCAGTTCAACATTATCTGCAAGGGAATTCGCGTTAAGAGCAACACGGTTTT  >  NC_000913/1587071‑1587250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`