BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,656,923	T→C	P277P (CCT→CCC)	b1587 →	putative oxidoreductase major subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,656,923	0	T	C	100.0%	567.0 / NA	180	P277P (CCT→CCC)	b1587	putative oxidoreductase major subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/110); total (70/110)

Only 100 of 184 total aligned reads displayed.

AAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATAA  >  NC_000913/1656834‑1657012

acaGCGCGCGAGAAATCGAACTCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCAtt                                                                                        <  1:3250078/91‑1 (MQ=255)

   gcgcgcGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGc                                                                                     >  2:7923552/1‑93 (MQ=255)

       gcgAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCgg                                                                                 <  2:4866615/93‑1 (MQ=255)

          agaAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCa                                                                              <  1:5596540/93‑1 (MQ=255)

           gaAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCAc                                                                             <  1:677748/93‑1 (MQ=255)

             aaTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCg                                                                           >  1:436670/1‑93 (MQ=255)

             aaTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCg                                                                           >  1:7175311/1‑93 (MQ=255)

              aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                          <  2:122299/93‑1 (MQ=255)

              aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                          <  2:6828839/93‑1 (MQ=255)

              aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGACTCCCCATTCGCCCGGGCAccca                                                                          >  2:3957005/1‑91 (MQ=255)

              aTCGAACACCAAAATGATTGTTATCGATCCGCAATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                          <  1:6035707/93‑1 (MQ=255)

               tCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGAt                                                                         <  1:1193734/93‑1 (MQ=255)

               tCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGAt                                                                         >  1:5759750/1‑93 (MQ=255)

                 gAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGc                                                                       >  1:281344/1‑93 (MQ=255)

                   aCGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcg                                                                     <  1:1465772/93‑1 (MQ=255)

                    cGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcgc                                                                    >  1:7002144/1‑93 (MQ=255)

                     gCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcgcg                                                                   >  2:6590591/1‑93 (MQ=255)

                     gCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcgcg                                                                   >  2:6225716/1‑93 (MQ=255)

                      ccAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCgcgc                                                                  >  1:895611/1‑93 (MQ=255)

                        aaaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTg                                                                <  1:7625534/93‑1 (MQ=255)

                        aaaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTg                                                                >  2:1217084/1‑93 (MQ=255)

                         aaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTgg                                                               >  2:4174246/1‑93 (MQ=255)

                         aaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTgg                                                               >  1:6353448/1‑93 (MQ=255)

                          aaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGt                                                              >  1:1627145/1‑93 (MQ=255)

                          aaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGt                                                              >  2:6147295/1‑93 (MQ=255)

                           aTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGtt                                                             >  2:11340/1‑93 (MQ=255)

                           aTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGtt                                                             <  1:3824642/93‑1 (MQ=255)

                           aTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGtt                                                             <  1:4298618/93‑1 (MQ=255)

                           aTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCAGGGCACCGATGCCGCGCTGGtt                                                             <  1:1375676/93‑1 (MQ=255)

                            tGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTg                                                            >  1:4826886/1‑93 (MQ=255)

                             gATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGc                                                           <  2:6092282/93‑1 (MQ=255)

                             gATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGc                                                           >  1:1762607/1‑93 (MQ=255)

                               ttGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCgg                                                         <  2:4538771/93‑1 (MQ=255)

                                 gTTCTCGATCCGCGATAAACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGt                                                       <  1:6966141/93‑1 (MQ=255)

                                 gTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGt                                                       >  2:5215000/1‑93 (MQ=255)

                                  ttATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTa                                                      <  1:269050/93‑1 (MQ=255)

                                  tcaTCGATCCGCGATATACTGAAACGGCTGCCTGTCGTGAAGACGAATGGCTCCCCAATCGCCCGGGCACCGAATCCTCGCCGGGTGCgggga                                                      >  1:7020043/3‑91 (MQ=255)

                                   tATCGATCCGCGATATACCGATCCGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAt                                                     <  2:2672812/93‑1 (MQ=255)

                                   tATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAt                                                     <  2:2362151/93‑1 (MQ=255)

                                   tATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAt                                                     <  2:5709974/93‑1 (MQ=255)

                                    aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                    >  1:1121382/1‑93 (MQ=255)

                                    aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                    <  2:6942604/93‑1 (MQ=255)

                                    aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                    <  1:1586804/93‑1 (MQ=255)

                                    aTCGATCCGCGAGATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                    <  1:7605421/93‑1 (MQ=255)

                                     tCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTg                                                   <  1:5061342/93‑1 (MQ=255)

                                     tCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGGTGCGGGTATTg                                                   >  1:4594844/1‑93 (MQ=255)

                                      cGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGc                                                  <  2:7080705/93‑1 (MQ=255)

                                       gATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGcc                                                 >  2:6377034/1‑93 (MQ=255)

                                        aTCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCt                                                >  1:3171665/1‑93 (MQ=255)

                                         tCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTg                                               <  1:7732928/93‑1 (MQ=255)

                                          ccGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTgg                                              <  2:3060488/93‑1 (MQ=255)

                                               atatACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTAtt                                         >  1:4342760/1‑93 (MQ=255)

                                                tataCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTg                                        <  1:6752734/93‑1 (MQ=255)

                                                tataCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTg                                        <  1:6752735/93‑1 (MQ=255)

                                                  taCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGAt                                      <  1:2154760/93‑1 (MQ=255)

                                                  taCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGAt                                      <  1:5962678/93‑1 (MQ=255)

                                                   aCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGAtt                                     <  1:91576/93‑1 (MQ=255)

                                                   aCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGAtt                                     <  2:6513097/93‑1 (MQ=255)

                                                    ccGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTa                                    >  1:2741614/1‑93 (MQ=255)

                                                     cGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTaa                                   <  1:428149/93‑1 (MQ=255)

                                                     cGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGACATTGTTTaa                                   >  1:734603/1‑93 (MQ=255)

                                                      gATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAAc                                  <  1:5180569/93‑1 (MQ=255)

                                                      gATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGCTGCGGGTATTGCCTGGGTATTGATTAAc                                  <  1:1027902/93‑1 (MQ=255)

                                                          cGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGaaa                              <  1:1766835/93‑1 (MQ=255)

                                                           ggCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGaaaa                             <  2:2818141/93‑1 (MQ=255)

                                                           ggCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGaaaa                             <  2:3847114/93‑1 (MQ=255)

                                                             cTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAtc                           <  2:1549611/93‑1 (MQ=255)

                                                             cTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAtc                           <  2:7305384/93‑1 (MQ=255)

                                                             cTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAtc                           <  2:4123087/93‑1 (MQ=255)

                                                              tGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCTCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAtct                          <  1:5944069/93‑1 (MQ=255)

                                                              tGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGGATTGCCTGGGTATTGATTAACGAAAAtct                          >  1:2923357/1‑93 (MQ=255)

                                                               gCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAtctc                         >  2:3488199/1‑93 (MQ=255)

                                                                ccGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCg                        <  2:5126165/93‑1 (MQ=255)

                                                                 cGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGt                       >  1:5952488/1‑93 (MQ=255)

                                                                  ggTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGtt                      <  1:6610652/93‑1 (MQ=255)

                                                                   gTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTg                     >  1:236265/1‑93 (MQ=255)

                                                                   gTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTg                     >  1:1977922/1‑93 (MQ=255)

                                                                   gTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTg                     <  1:2935442/93‑1 (MQ=255)

                                                                   gTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCATTg                     <  2:7747851/93‑1 (MQ=255)

                                                                    tCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGa                    <  2:5181948/93‑1 (MQ=255)

                                                                     cGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGAt                   <  1:462721/93‑1 (MQ=255)

                                                                      gTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATc                  <  1:7168187/93‑1 (MQ=255)

                                                                       tGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCa                 <  1:3988158/93‑1 (MQ=255)

                                                                          aGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAAcc              <  2:1057439/93‑1 (MQ=255)

                                                                              gAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCtttt          >  2:5576078/1‑93 (MQ=255)

                                                                               aaTGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtc         <  2:1103030/93‑1 (MQ=255)

                                                                               aaTGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtc         >  1:555342/1‑93 (MQ=255)

                                                                                aTGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtct        >  1:2526197/1‑93 (MQ=255)

                                                                                 tGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtctc       <  2:4925250/93‑1 (MQ=255)

                                                                                 tGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtctc       <  1:711367/93‑1 (MQ=255)

                                                                                 tGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtctc       <  2:1879129/93‑1 (MQ=255)

                                                                                 tGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtctc       <  2:1295011/93‑1 (MQ=255)

                                                                                  ggCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCg      <  2:1242180/93‑1 (MQ=255)

                                                                                   gCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGa     <  1:6212986/93‑1 (MQ=255)

                                                                                   gCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGa     >  2:6695767/1‑93 (MQ=255)

                                                                                    cTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGAt    >  2:5827485/1‑93 (MQ=255)

                                                                                     tCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATa   >  1:2464212/1‑93 (MQ=255)

                                                                                     tCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATa   <  1:1721944/93‑1 (MQ=255)

                                                                                      ccccATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATaa  >  2:680914/1‑93 (MQ=255)

                                                                                      ccccATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATaa  <  2:2701303/93‑1 (MQ=255)

AAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATAA  >  NC_000913/1656834‑1657012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`