BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,684,672	A→G	intergenic (‑60/+83)	fumC ← / ← fumA	fumarase C/fumarase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,684,672	0	A	G	100.0%	622.5 / NA	195	intergenic (‑60/+83)	fumC/fumA	fumarase C/fumarase A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (88/107); total (88/107)

Only 100 of 198 total aligned reads displayed.

TCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTAGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTC  >  NC_000913/1684582‑1684761

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         <  1:3599137/93‑1 (MQ=255)

tCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGc                                                                                         >  1:2343100/1‑93 (MQ=255)

 cGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCt                                                                                        >  2:6481946/1‑93 (MQ=255)

  gAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTc                                                                                       >  2:1779709/1‑93 (MQ=255)

  gAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTc                                                                                       <  2:7113718/93‑1 (MQ=255)

  gAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTc                                                                                       >  2:6736369/1‑93 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTcc                                                                                      >  2:5374801/1‑92 (MQ=255)

   aaTCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCa                                                                                      >  2:2083930/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    >  1:7130589/1‑93 (MQ=255)

     tCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACt                                                                                    <  1:4327891/93‑1 (MQ=255)

      cTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtt                                                                                   <  1:4073415/93‑1 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  >  1:3055961/1‑93 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  >  2:4159508/1‑93 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  >  2:2500912/1‑93 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  >  1:4079760/1‑93 (MQ=255)

       tttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACtta                                                                                  <  1:4213586/93‑1 (MQ=255)

        ttttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttat                                                                                 >  2:1339352/1‑93 (MQ=255)

        tgtgcGCTGCGTACTGTATACATGACCTGCTCCTCACCTGATTAATTTTGTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttat                                                                                 <  1:1345467/89‑1 (MQ=255)

         tttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttatt                                                                                <  2:2493819/93‑1 (MQ=255)

          ttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttatta                                                                               <  2:2679692/93‑1 (MQ=255)

          ttCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACttatta                                                                               <  2:3326584/93‑1 (MQ=255)

            cGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTattatt                                                                             <  2:229414/93‑1 (MQ=255)

            cGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTattatt                                                                             <  2:4495824/93‑1 (MQ=255)

            cGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTattatt                                                                             <  1:4184741/93‑1 (MQ=255)

              cTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTa                                                                           <  2:5979007/93‑1 (MQ=255)

                gCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTAcc                                                                         <  2:2777307/93‑1 (MQ=255)

                  gTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAt                                                                       >  2:478785/1‑93 (MQ=255)

                  gTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAt                                                                       >  1:6512333/1‑93 (MQ=255)

                  gTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAt                                                                       <  2:4232733/93‑1 (MQ=255)

                    aCTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAttt                                                                     >  2:3449032/1‑93 (MQ=255)

                    aCTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAttt                                                                     <  1:1011877/93‑1 (MQ=255)

                    aCTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAttt                                                                     <  2:5553388/93‑1 (MQ=255)

                    aCTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCAttt                                                                     <  2:4988247/93‑1 (MQ=255)

                      tGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGa                                                                   >  1:3424220/1‑93 (MQ=255)

                       gTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGAt                                                                  <  1:416083/93‑1 (MQ=255)

                       gTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGAt                                                                  <  2:1722441/93‑1 (MQ=255)

                       gTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGAt                                                                  >  2:6476286/1‑93 (MQ=255)

                        tATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATa                                                                 >  1:7370542/1‑93 (MQ=255)

                        tATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATa                                                                 >  1:6490474/1‑93 (MQ=255)

                         aTTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATaa                                                                <  2:4148180/93‑1 (MQ=255)

                          ttCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAAc                                                               >  1:7190152/1‑93 (MQ=255)

                          ttCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAAc                                                               <  1:1758760/93‑1 (MQ=255)

                            cATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACaa                                                             >  1:7825547/1‑93 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           <  1:4566756/93‑1 (MQ=255)

                              tGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAAt                                                           >  1:543519/1‑93 (MQ=255)

                               gACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATg                                                          <  2:7605911/93‑1 (MQ=255)

                                 ccTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGtt                                                        <  2:5188575/93‑1 (MQ=255)

                                  cTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGttt                                                       <  2:4545449/93‑1 (MQ=255)

                                  cTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGttt                                                       <  2:4333909/93‑1 (MQ=255)

                                  cTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGttt                                                       <  1:554940/93‑1 (MQ=255)

                                  cTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGttt                                                       <  1:5912000/93‑1 (MQ=255)

                                    gCTCCTCACCTGATTAATGTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTgg                                                     <  1:6376468/93‑1 (MQ=255)

                                      tcctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTc                                                   >  1:5620342/1‑93 (MQ=255)

                                       cctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGtgt                                                  <  1:6449925/93‑3 (MQ=255)

                                       cctcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCt                                                  <  2:6316655/93‑1 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                >  2:4047413/1‑93 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                >  2:791629/1‑93 (MQ=255)

                                         tcACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCttt                                                <  1:4514802/93‑1 (MQ=255)

                                          cACCTGATTAATTTTTTCTTTCTGTTTTGCTGTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTc                                               <  1:2571374/93‑1 (MQ=255)

                                           aCCTGATTAATTTCTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCg                                              <  1:7912163/93‑1 (MQ=255)

                                            ccTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGt                                             >  1:863248/1‑93 (MQ=255)

                                            ccTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGt                                             <  2:161385/93‑1 (MQ=255)

                                            ccTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGt                                             >  1:7650010/1‑93 (MQ=255)

                                            ccTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGt                                             >  1:2102474/1‑93 (MQ=255)

                                             cTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTg                                            <  1:3324689/93‑1 (MQ=255)

                                              tGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGc                                           >  2:1902090/1‑93 (MQ=255)

                                              tGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGc                                           >  1:218732/1‑93 (MQ=255)

                                               gATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGcc                                          >  1:3481454/1‑93 (MQ=255)

                                                 ttAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCAt                                        >  2:2809567/1‑93 (MQ=255)

                                                   aaTTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGt                                      <  2:1803568/93‑1 (MQ=255)

                                                      tttttCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaa                                   <  1:4732659/93‑1 (MQ=255)

                                                         ttctttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaaa                                <  1:6803828/93‑1 (MQ=255)

                                                          tctttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaaaa                               <  1:4423149/93‑1 (MQ=255)

                                                          tctttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaaaa                               <  2:3218182/93‑1 (MQ=255)

                                                          tctttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTaaaaaaa                               >  1:1598520/1‑93 (MQ=255)

                                                           ttttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAc                              <  1:5432778/92‑1 (MQ=255)

                                                            tttctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAAcc                             >  1:188060/1‑93 (MQ=255)

                                                              tctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGc                           <  2:3148673/93‑1 (MQ=255)

                                                              tctGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGc                           <  2:1492029/93‑1 (MQ=255)

                                                                tGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGccc                         >  2:5838145/1‑93 (MQ=255)

                                                                tGTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGccc                         <  1:1182338/93‑1 (MQ=255)

                                                                 gTTTTGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGcccc                        >  1:5899410/1‑93 (MQ=255)

                                                                     tGCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAg                    <  2:7528043/93‑1 (MQ=255)

                                                                      gCTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAgg                   >  1:4705414/1‑93 (MQ=255)

                                                                       cTTTCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAggg                  >  2:4246522/1‑93 (MQ=255)

                                                                        tttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggc                 >  2:3820952/1‑93 (MQ=255)

                                                                         ttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggcg                <  1:7837506/93‑1 (MQ=255)

                                                                         ttCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggcg                <  2:3517725/93‑1 (MQ=255)

                                                                          tCGTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGggcgg               >  2:7021168/1‑93 (MQ=255)

                                                                            gTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGct             >  1:4989115/1‑93 (MQ=255)

                                                                            gTTAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGct             >  1:4380312/1‑93 (MQ=255)

                                                                             ttAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctc            <  1:3134924/93‑1 (MQ=255)

                                                                             ttAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctc            >  1:19717/1‑93 (MQ=255)

                                                                              tAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctct           >  1:5228278/1‑93 (MQ=255)

                                                                              tAAGCAACTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGctct           <  2:7682669/93‑1 (MQ=255)

                                                                                   aaCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTa      >  1:5242205/1‑93 (MQ=255)

                                                                                   aaCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTa      >  1:6765371/1‑93 (MQ=255)

                                                                                    aCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGTGCGGCTCTGTTTAt     <  1:6921543/93‑1 (MQ=255)

                                                                                    aCTTTTGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAt     >  1:3434303/1‑93 (MQ=255)

                                                                                      ttttGGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTAttt   >  2:7872677/1‑93 (MQ=255)

TCGAATCTTTTTCGCTGCGTACTGTATTCATGACCTGCTCCTCACCTGATTAATTTTTTCTTTCTGTTTTGCTTTCGTTAAGCAACTTTTAGCTCACTTATTATTTACCATTTGATAACAAATGTTTGGTCTTTCGTGCCATGTAAAAAAACCGCCCCGAAGGGCGGCTCTGTTTATTTC  >  NC_000913/1684582‑1684761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`