BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,698,072	C→T	R232C (CGT→TGT)	malX →	MalX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,698,072	0	C	T	99.5%	734.2 / ‑5.8	207	R232C (CGT→TGT)	malX	MalX
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (104/102); total (104/103)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01

Only 100 of 217 total aligned reads displayed.

TGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAA  >  NC_000913/1697982‑1698161

tGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGt                                                                                         >  1:7088642/1‑93 (MQ=255)

 ggCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTc                                                                                        <  2:7093696/93‑1 (MQ=255)

  gCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTct                                                                                       <  1:3314292/93‑1 (MQ=255)

     gATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTctgct                                                                                    <  1:3395802/93‑1 (MQ=255)

      aTTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTctgctg                                                                                   <  1:6419578/93‑1 (MQ=255)

       ttttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGt                                                                                  >  1:488406/1‑93 (MQ=255)

        tttCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGtt                                                                                 <  2:3392290/93‑1 (MQ=255)

             ccATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGt                                                                            <  2:2684364/93‑1 (MQ=255)

              cATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGtt                                                                           >  1:5083148/1‑93 (MQ=255)

              cATGGGTATGAGCGGCTTGGGCCATATGATAACCAGCGCGGGTGGTTTCGGACCGATGCTGTTTGGTCCCGGTGAATGTCTGCTGTTGCCGtt                                                                           <  2:7672211/93‑1 (MQ=255)

                 gggTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTgg                                                                        >  2:2536242/1‑93 (MQ=255)

                  gggaTTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTAATTTCGGACGGGTGCTGTTTGGTACCGGTGAATGTCTGCTGGTGCCGTTTGGt                                                                       <  2:2760673/90‑1 (MQ=255)

                   gTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTc                                                                      >  1:7923959/1‑93 (MQ=255)

                    tATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCt                                                                     >  2:4929954/1‑93 (MQ=255)

                     aTTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTg                                                                    >  1:3240315/1‑93 (MQ=255)

                      ttAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGc                                                                   <  1:2484477/93‑1 (MQ=255)

                      ttAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGc                                                                   <  1:1558871/93‑1 (MQ=255)

                      ttAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGc                                                                   >  2:3895047/1‑93 (MQ=255)

                      ttAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGc                                                                   >  1:5953208/1‑93 (MQ=255)

                       tatcGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCa                                                                  <  2:5944852/90‑1 (MQ=255)

                         gCGGCTTGGGCCATATGATAAACAGCGCGGGGGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATc                                                                >  1:2368218/1‑93 (MQ=255)

                           ggCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcac                                                              <  1:5662681/93‑1 (MQ=255)

                            gCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcaca                                                             >  1:2875867/1‑93 (MQ=255)

                            gCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcaca                                                             <  1:4090549/93‑1 (MQ=255)

                            gCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATcaca                                                             <  2:6357529/93‑1 (MQ=255)

                             gttGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACAt                                                            <  2:5633967/92‑1 (MQ=255)

                             cTTGGGTCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACAt                                                            <  2:5353954/93‑1 (MQ=255)

                              ttGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACAtt                                                           >  1:6440346/1‑93 (MQ=255)

                               tGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTc                                                          >  1:5310363/1‑93 (MQ=255)

                                 ggCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtg                                                        >  1:6234014/1‑93 (MQ=255)

                                 ggCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtg                                                        <  1:6047579/93‑1 (MQ=255)

                                 ggCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtg                                                        <  1:5465468/93‑1 (MQ=255)

                                  gCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtgg                                                       <  1:6604892/93‑1 (MQ=255)

                                   ccATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggt                                                      <  1:3494026/93‑1 (MQ=255)

                                   ccATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggt                                                      >  1:5360827/1‑93 (MQ=255)

                                   ccATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggt                                                      <  1:3533951/93‑1 (MQ=255)

                                   ccATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggt                                                      <  1:141528/93‑1 (MQ=255)

                                    cATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggtg                                                     >  2:2048698/1‑93 (MQ=255)

                                     atatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCtggtgg                                                    >  1:7298659/1‑93 (MQ=255)

                                      tatGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGc                                                   >  1:4808315/1‑93 (MQ=255)

                                      agtGATAAGCACTGCGGGTGATTTCGTAGCGATTCTGTTTGATACCGGAAAATGTCTGCGGTTGCCGTTTGGTCTGCATCGCATGCTGGTGGc                                                   <  2:6929347/91‑1 (MQ=255)

                                       atGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCa                                                  >  2:7571531/1‑93 (MQ=255)

                                       atGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCa                                                  <  2:907537/93‑1 (MQ=255)

                                       atGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCa                                                  <  1:7174491/93‑1 (MQ=255)

                                       atGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCa                                                  <  1:5818482/93‑1 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 >  1:6837862/1‑93 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 >  2:5283876/1‑93 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 >  2:4393182/1‑93 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 >  2:2479414/1‑93 (MQ=255)

                                        tGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAt                                                 >  2:1226826/1‑93 (MQ=255)

                                         gATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCAtt                                                >  1:533971/1‑93 (MQ=255)

                                           tAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTaa                                              <  2:1933360/93‑1 (MQ=255)

                                            aaaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAt                                             <  2:3127992/93‑1 (MQ=255)

                                             aaCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAtt                                            <  2:2276435/93‑1 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTTCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           <  2:7936977/93‑1 (MQ=255)

                                              aCAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTc                                           <  2:4435398/93‑1 (MQ=255)

                                               cAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCg                                          >  2:1333456/1‑93 (MQ=255)

                                                aGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTATTTCGc                                         >  1:4775299/1‑93 (MQ=255)

                                                aGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGc                                         <  1:74084/93‑1 (MQ=255)

                                                 gcgcGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCt                                        <  2:6566283/93‑1 (MQ=255)

                                                   gcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCttt                                      <  2:5444077/93‑1 (MQ=255)

                                                   gcgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCttt                                      <  1:5710519/93‑1 (MQ=255)

                                                    cgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTa                                     >  2:3215815/1‑93 (MQ=255)

                                                    cgGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTa                                     <  1:1100941/93‑1 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    >  2:1867192/1‑93 (MQ=255)

                                                     gggTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTAc                                    >  1:4292196/1‑93 (MQ=255)

                                                       gTGATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCg                                  <  2:3012850/93‑1 (MQ=255)

                                                         gATTTCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGAc                                >  1:7795764/1‑93 (MQ=255)

                                                            ttCGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCa                             <  1:2160902/93‑1 (MQ=255)

                                                              cGGACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAgg                           >  2:3189358/1‑93 (MQ=255)

                                                               ggACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggc                          <  2:3799422/93‑1 (MQ=255)

                                                               ggACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggc                          <  2:5901640/93‑1 (MQ=255)

                                                                gACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcg                         >  2:1416554/1‑93 (MQ=255)

                                                                gACCGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAggcg                         >  2:3626350/1‑93 (MQ=255)

                                                                   cGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCa                      >  1:2943671/1‑93 (MQ=255)

                                                                   cGATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCa                      <  2:6320641/93‑1 (MQ=255)

                                                                    gATGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCAc                     <  2:5431088/93‑1 (MQ=255)

                                                                    gATGCTGTGTGGTACCGGTGAATGTCTGCTTGTGCCGTTTGGTCTGCATCACATTCGGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCAc                     <  1:5912954/93‑1 (MQ=255)

                                                                     aTGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACg                    >  1:1275755/1‑93 (MQ=255)

                                                                      tGCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGc                   >  1:460992/1‑93 (MQ=255)

                                                                      tGCTGTTTGGTACCGGAGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAAATCGCTTTATCGACGCAGGCGGCACga                   >  2:1718155/1‑92 (MQ=255)

                                                                       tcTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCa                  <  2:3867358/92‑1 (MQ=255)

                                                                       gCTGTTTGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCAACGCAGGCGGCACGCa                  >  1:1806579/1‑93 (MQ=255)

                                                                           tttGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGaa              >  1:3726864/1‑93 (MQ=255)

                                                                            ttGGTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAg             <  2:968044/93‑1 (MQ=255)

                                                                              ggTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTc           <  1:4444035/93‑1 (MQ=255)

                                                                              ggTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTc           <  1:4182644/93‑1 (MQ=255)

                                                                              ggTACCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTc           <  2:4359396/93‑1 (MQ=255)

                                                                               gttccGGTGAATGTCTTCTGTTGCCGTTTCGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCt          <  1:1725490/90‑1 (MQ=255)

                                                                                 aCCGGTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACACAGGCGGCACGCAGGAAGTCTGc        <  2:3674190/93‑1 (MQ=255)

                                                                                    ggTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGt     >  2:6870525/1‑93 (MQ=255)

                                                                                    ggTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGt     <  1:2531978/93‑1 (MQ=255)

                                                                                    ggTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGt     <  1:1432805/93‑1 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTc    <  1:3214812/93‑1 (MQ=255)

                                                                                     gTGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACAGACGCAGGCGGCACGCTGGAGGTCTGCgggt    >  2:6316170/1‑91 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCCGGCGGCACGCAGGAAGTCTGCGGTCa   >  2:1037582/1‑93 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   >  2:5927711/1‑93 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   >  1:6358945/1‑93 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   >  1:2112564/1‑93 (MQ=255)

                                                                                      tGAATGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCa   >  2:890787/1‑93 (MQ=255)

TGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAA  >  NC_000913/1697982‑1698161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`