BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,705,521	C→T	V193V (GTC→GTT)	b1629 →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,705,521	0	C	T	100.0%	671.6 / NA	189	V193V (GTC→GTT)	b1629	putative membrane protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (82/107); total (82/107)

Only 100 of 200 total aligned reads displayed.

AAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAT  >  NC_000913/1705432‑1705610

aaGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTa                                                                                        >  2:1498649/1‑93 (MQ=255)

aaGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTa                                                                                        >  1:4170761/1‑93 (MQ=255)

  gATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTaga                                                                                      <  1:4523859/93‑1 (MQ=255)

  aatggAAACTTTGATTATAAGCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTaga                                                                                      <  2:23096/89‑1 (MQ=255)

   aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag                                                                                     <  1:6854007/93‑1 (MQ=255)

   aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag                                                                                     <  1:5414496/93‑1 (MQ=255)

   aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag                                                                                     >  2:6633919/1‑93 (MQ=255)

   aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag                                                                                     <  1:2723085/93‑1 (MQ=255)

   aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACACTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag                                                                                     <  1:2255261/93‑1 (MQ=255)

    ttGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAgg                                                                                    >  2:7778107/1‑93 (MQ=255)

    ttGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAgg                                                                                    >  2:1043569/1‑93 (MQ=255)

    ttGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAgg                                                                                    >  2:5625480/1‑93 (MQ=255)

    ttGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGGTGTAGAgg                                                                                    >  1:2814197/1‑93 (MQ=255)

     tGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAggg                                                                                   <  1:4359424/93‑1 (MQ=255)

      gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt                                                                                  >  1:71152/1‑93 (MQ=255)

      gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt                                                                                  >  1:4720559/1‑93 (MQ=255)

        aaCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTAt                                                                                <  1:5618082/93‑1 (MQ=255)

          cGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGTAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTc                                                                              >  2:5501388/1‑93 (MQ=255)

          cGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTc                                                                              >  2:116290/1‑93 (MQ=255)

           gTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGCATTcc                                                                             >  2:3873144/1‑92 (MQ=255)

             tGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTGTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCa                                                                           <  1:6553633/93‑1 (MQ=255)

               aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt                                                                         >  2:7349349/1‑93 (MQ=255)

               aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt                                                                         >  1:4570385/1‑93 (MQ=255)

                ttATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAttt                                                                        >  1:602693/1‑92 (MQ=255)

                ttATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTc                                                                        <  1:2753100/93‑1 (MQ=255)

                ttATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTc                                                                        >  2:6719298/1‑93 (MQ=255)

                ttATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTc                                                                        >  1:2708307/1‑93 (MQ=255)

                 tATCATCGCGGCGGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCt                                                                       <  1:3285314/93‑1 (MQ=255)

                 tATCAACGGGGCGGAGTGCTAGCCGTACATTACCGCCGATGACCGTTTGATGCAGCATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCt                                                                       <  2:3660127/93‑1 (MQ=255)

                 tATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCt                                                                       >  2:1828105/1‑93 (MQ=255)

                  aTCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCtt                                                                      <  1:3048745/93‑1 (MQ=255)

                   tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     >  2:1984514/1‑93 (MQ=255)

                   tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     >  2:4908314/1‑93 (MQ=255)

                   tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     >  1:7262368/1‑93 (MQ=255)

                    caccgcgGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTGTTCGCATTCTTgc                                                                    <  1:3679211/90‑1 (MQ=255)

                    cAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgc                                                                    <  2:4550379/93‑1 (MQ=255)

                     aaCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgcg                                                                   >  1:607509/1‑93 (MQ=255)

                      aCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgcgc                                                                  <  2:4008347/93‑1 (MQ=255)

                          ggCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCatat                                                              <  1:5538559/93‑1 (MQ=255)

                            cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc                                                            >  2:5567385/1‑93 (MQ=255)

                            cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc                                                            <  1:4442660/93‑1 (MQ=255)

                            cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc                                                            <  1:3521211/93‑1 (MQ=255)

                            cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGGTGTAGAGGGGATTCGCATTCTTGCGCATATTc                                                            >  1:7590844/1‑93 (MQ=255)

                             tGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCt                                                           >  1:122654/1‑93 (MQ=255)

                             tGAGTGCGAGCCGAACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCt                                                           <  2:2183444/93‑1 (MQ=255)

                              gAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTg                                                          >  1:5139974/1‑93 (MQ=255)

                               aGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGc                                                         <  2:1289142/93‑1 (MQ=255)

                                gggCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCa                                                        <  2:5853787/91‑1 (MQ=255)

                                    gAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCa                                                    >  2:271395/1‑93 (MQ=255)

                                       ccGTACATTACCGCCGATGACCGTTTGATGTAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgc                                                 <  1:2169827/93‑1 (MQ=255)

                                        cGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcgcg                                                >  2:7682734/1‑93 (MQ=255)

                                              ttACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTc                                          >  1:2596929/1‑93 (MQ=255)

                                              ttACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTc                                          <  2:4199593/93‑1 (MQ=255)

                                              ttACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTc                                          >  1:3439059/1‑93 (MQ=255)

                                                aCCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCtt                                        <  1:3941298/93‑1 (MQ=255)

                                                 ccgccgATGACCGTTTGATGCAGGATTTCGCGTCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTa                                       <  1:6624556/93‑1 (MQ=255)

                                                 ccgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTa                                       >  2:2984278/1‑93 (MQ=255)

                                                  cgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTAt                                      <  1:1948785/93‑1 (MQ=255)

                                                   gccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATc                                     <  2:3763526/93‑1 (MQ=255)

                                                   gccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATc                                     <  2:470300/93‑1 (MQ=255)

                                                    ccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCg                                    <  1:4411365/93‑1 (MQ=255)

                                                     cgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCgg                                   <  2:5393337/93‑1 (MQ=255)

                                                      gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc                                  >  2:5205500/1‑93 (MQ=255)

                                                       aTGCCCGTTTGATGCAGGATTGCGCGGCTCAGTTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCa                                 <  1:1131901/93‑1 (MQ=255)

                                                        tGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAt                                <  2:7107945/93‑1 (MQ=255)

                                                        tGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAt                                <  1:7931116/93‑1 (MQ=255)

                                                        tGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAt                                <  2:4148791/93‑1 (MQ=255)

                                                            cGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGaa                            <  2:326280/93‑1 (MQ=255)

                                                            cGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGaa                            <  1:3649359/93‑1 (MQ=255)

                                                              tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa                          <  1:1563246/93‑1 (MQ=255)

                                                              tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa                          >  2:6613119/1‑93 (MQ=255)

                                                              tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa                          <  1:7071836/93‑1 (MQ=255)

                                                              tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa                          >  1:5586035/1‑93 (MQ=255)

                                                                 gATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATaa                       <  1:4149356/93‑1 (MQ=255)

                                                                 gATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATaa                       <  2:5777382/93‑1 (MQ=255)

                                                                  aTGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAc                      <  1:5234603/93‑1 (MQ=255)

                                                                  aTGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAc                      <  2:3508942/93‑1 (MQ=255)

                                                                   tGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACa                     >  2:2750995/1‑93 (MQ=255)

                                                                   tGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACa                     <  2:1564384/93‑1 (MQ=255)

                                                                   tGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCAAATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACa                     <  2:6869223/93‑1 (MQ=255)

                                                                    gCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACaa                    <  2:716961/93‑1 (MQ=255)

                                                                     cAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACaaa                   <  1:5429435/93‑1 (MQ=255)

                                                                      cggATGGCGCTGCTCAGGTTGTAGATGTTATTCGGATTCTTGCGAATATTCTGCAGCCACGCTAAATTCTTATCGGCATTGAAGATAACAAAc                  <  2:4791445/92‑1 (MQ=255)

                                                                      aGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAc                  >  2:217140/1‑93 (MQ=255)

                                                                      aGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAc                  <  1:3058900/93‑1 (MQ=255)

                                                                        gATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAccc                >  1:5915790/1‑92 (MQ=255)

                                                                        gATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCg                >  1:1656412/1‑93 (MQ=255)

                                                                           tGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAg             <  1:7486141/93‑1 (MQ=255)

                                                                            gcgcGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAgg            <  2:2584363/93‑1 (MQ=255)

                                                                              gcgGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCg          <  1:4867839/93‑1 (MQ=255)

                                                                               cgGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGa         <  1:4978215/93‑1 (MQ=255)

                                                                                ggCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGAt        <  1:4033892/93‑1 (MQ=255)

                                                                                 gCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCGTATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGAtt       >  1:2410459/1‑93 (MQ=255)

                                                                                    cAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTcc    <  2:6344396/93‑1 (MQ=255)

                                                                                     aGGTTGTAGATGGTATTCGCATTCTTGCTCATATTCTGCAGCCACTCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCa   <  1:5803568/93‑1 (MQ=255)

                                                                                     aGGTTGTAGAGGGTATTCGTATCCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCa   <  2:2668846/93‑1 (MQ=255)

                                                                                     aGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCa   <  2:5902623/93‑1 (MQ=255)

                                                                                     aGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCa   <  2:4422247/93‑1 (MQ=255)

                                                                                      ggTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGCTTTCCAt  >  1:1822615/1‑93 (MQ=255)

                                                                                      ggTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAt  >  2:2883391/1‑93 (MQ=255)

AAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAT  >  NC_000913/1705432‑1705610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`