BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,709,122	G→A	A91T (GCC→ACC)	ydgQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,709,122	0	G	A	98.9%	633.3 / NA	186	A91T (GCC→ACC)	ydgQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (88/95); minor base C (0/2); total (88/98)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 203 total aligned reads displayed.

CACTGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACGCCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTCGCCGCC  >  NC_000913/1709032‑1709211

cACTGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAacgcctacacc                                                                                         >  1:2133592/1‑93 (MQ=255)

   tGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCttt                                                                                      <  2:1379502/93‑1 (MQ=255)

   tGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCttt                                                                                      >  1:1456169/1‑93 (MQ=255)

    ggACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTg                                                                                     >  1:3672830/1‑93 (MQ=255)

    ggACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTg                                                                                     <  2:2619072/93‑1 (MQ=255)

      aCGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGc                                                                                   <  2:3902259/93‑1 (MQ=255)

        gCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCt                                                                                 >  1:5302929/1‑93 (MQ=255)

        gCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCt                                                                                 <  1:2807401/93‑1 (MQ=255)

           aGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTa                                                                              <  2:1845677/93‑1 (MQ=255)

           aGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTa                                                                              <  1:1171508/93‑1 (MQ=255)

            gCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTat                                                                             <  2:6356841/93‑1 (MQ=255)

             ccGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTatc                                                                            <  1:6072978/93‑1 (MQ=255)

               gagaTCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTatcaa                                                                          <  1:2234764/93‑1 (MQ=255)

                agaTCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTatcaat                                                                         >  2:5599333/1‑93 (MQ=255)

                agaTCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTatcaat                                                                         <  1:1007769/93‑1 (MQ=255)

                 gaTCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTatcaatc                                                                        <  2:7914525/93‑1 (MQ=255)

                 gaTCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTatcaatc                                                                        <  2:4740759/93‑1 (MQ=255)

                   tCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACATATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCAt                                                                      >  2:6956298/1‑93 (MQ=255)

                     cGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTa                                                                    >  1:3422682/1‑93 (MQ=255)

                     cGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTa                                                                    <  1:2906102/93‑1 (MQ=255)

                     cGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTa                                                                    >  1:4426331/1‑93 (MQ=255)

                      gCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAg                                                                   >  2:6518762/1‑93 (MQ=255)

                      gCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAg                                                                   <  2:3995073/93‑1 (MQ=255)

                      gCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAg                                                                   <  1:3696615/93‑1 (MQ=255)

                      gCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAg                                                                   <  1:414090/93‑1 (MQ=255)

                        aTTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAggg                                                                 >  1:1097527/1‑93 (MQ=255)

                         ttCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGa                                                                >  1:5879832/1‑93 (MQ=255)

                         ttCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGa                                                                <  1:4390969/93‑1 (MQ=255)

                         ttCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGa                                                                <  2:5279487/93‑1 (MQ=255)

                         ttCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGa                                                                >  2:638159/1‑93 (MQ=255)

                          tCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGAt                                                               >  2:5526788/1‑93 (MQ=255)

                          tCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGAt                                                               <  2:2286728/93‑1 (MQ=255)

                             cATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGAtttt                                                            <  1:3604271/93‑1 (MQ=255)

                              aTTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGAttttt                                                           <  1:2672797/93‑1 (MQ=255)

                               tttACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTa                                                          <  1:3206548/93‑1 (MQ=255)

                               tttACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTa                                                          <  1:6782316/93‑1 (MQ=255)

                                 tACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTAtt                                                        <  1:7017101/93‑1 (MQ=255)

                                  aCGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTc                                                       <  2:4642741/93‑1 (MQ=255)

                                    gTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCg                                                     >  2:7514951/1‑93 (MQ=255)

                                     tgatgaTCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGc                                                    <  2:4876265/93‑1 (MQ=255)

                                      gatgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCt                                                   >  1:1248982/1‑93 (MQ=255)

                                      gatgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCt                                                   <  2:4116273/93‑1 (MQ=255)

                                       atgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTg                                                  <  2:5351523/93‑1 (MQ=255)

                                        tgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGa                                                 >  1:7810947/1‑93 (MQ=255)

                                        tgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGa                                                 <  1:1977618/93‑1 (MQ=255)

                                        tgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGa                                                 >  1:5622138/1‑93 (MQ=255)

                                        tgatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGa                                                 >  1:511059/1‑93 (MQ=255)

                                         gatCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACCCCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGAt                                                <  2:4974242/93‑1 (MQ=255)

                                           tcatcGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTg                                              <  2:2550564/93‑1 (MQ=255)

                                           tcatcGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTg                                              >  2:909140/1‑93 (MQ=255)

                                             atcGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTc                                            >  1:1852112/1‑93 (MQ=255)

                                              tcGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCa                                           <  2:1156285/93‑1 (MQ=255)

                                               cGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCAc                                          <  1:6638737/93‑1 (MQ=255)

                                               cGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCAc                                          <  2:66428/93‑1 (MQ=255)

                                                 ccTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTa                                        >  2:7742012/1‑93 (MQ=255)

                                                 ccTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTa                                        >  2:289916/1‑93 (MQ=255)

                                                  cTCGGGGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTaa                                       >  2:1040528/1‑93 (MQ=255)

                                                   tCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAAc                                      >  1:7096801/1‑93 (MQ=255)

                                                   tCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAAc                                      <  2:3082606/93‑1 (MQ=255)

                                                   tCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAAc                                      <  1:723475/93‑1 (MQ=255)

                                                   tCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAAc                                      <  1:7512330/93‑1 (MQ=255)

                                                    cGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACt                                     <  1:2016567/93‑1 (MQ=255)

                                                     ggtggtCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTg                                    <  1:3349492/93‑1 (MQ=255)

                                                       tggtCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTa                                  <  1:763164/93‑1 (MQ=255)

                                                        ggtCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTAt                                 <  2:3150623/93‑1 (MQ=255)

                                                          tCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCg                               >  1:6191612/1‑93 (MQ=255)

                                                          tCAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCg                               >  1:4443454/1‑93 (MQ=255)

                                                           cAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGt                              <  1:5353391/93‑1 (MQ=255)

                                                           cAGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGt                              <  1:6012345/93‑1 (MQ=255)

                                                            aGCGCTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGtt                             >  2:4389315/1‑93 (MQ=255)

                                                              cgcTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTtgt                           <  1:1538513/93‑1 (MQ=255)

                                                               gcTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTtgtg                          <  2:4283949/93‑1 (MQ=255)

                                                                cTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTgg                         >  1:6401337/1‑93 (MQ=255)

                                                                cTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTgg                         <  2:4561286/93‑1 (MQ=255)

                                                                cTGTACAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTgg                         <  2:5981830/93‑1 (MQ=255)

                                                                  ttACAGATGCTGATCAACGCCTACTCCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGc                       <  1:405160/92‑1 (MQ=255)

                                                                     cAGATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCcgc                    >  1:5775316/1‑93 (MQ=255)

                                                                       gATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCgcgc                  <  1:6688433/93‑1 (MQ=255)

                                                                       gATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCgcgc                  <  1:6879268/93‑1 (MQ=255)

                                                                       gATGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCgcgc                  >  2:204447/1‑93 (MQ=255)

                                                                        attcTGATCAACGCCTACACCTTTGGCCTGTATCAAGCATTAGGGATTTTTATCCCGCTTATTGTCGCTAACTGTATCGTTGGGGGCGGCGCt                 <  2:2468944/90‑1 (MQ=255)

                                                                        aTGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCt                 >  2:7254023/1‑93 (MQ=255)

                                                                         tGCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTg                >  1:6494714/1‑93 (MQ=255)

                                                                          gCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGa               >  2:7888268/1‑93 (MQ=255)

                                                                          gCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGa               >  2:4454048/1‑93 (MQ=255)

                                                                          gCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGa               <  1:4798211/93‑1 (MQ=255)

                                                                          gCTGATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGa               >  2:1319276/1‑93 (MQ=255)

                                                                             gATCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGc            >  1:2574520/1‑93 (MQ=255)

                                                                              aTCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGcc           >  2:6735067/1‑93 (MQ=255)

                                                                              aTCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGcc           <  1:7340888/93‑1 (MQ=255)

                                                                               tCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCt          >  1:3377038/1‑93 (MQ=255)

                                                                               tCAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCt          >  1:7830001/1‑93 (MQ=255)

                                                                                cAACGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCtt         <  2:7629801/93‑1 (MQ=255)

                                                                                 aaCGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTc        >  1:3752901/1‑93 (MQ=255)

                                                                                 aaCGCCTACACCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTc        >  2:6455547/1‑93 (MQ=255)

                                                                                  acgcctacacctTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTcg       >  2:2369006/1‑93 (MQ=255)

                                                                                    gcctacacctTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTcgcc     <  2:3183918/93‑1 (MQ=255)

                                                                                      ctacacctTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTcgccgc   >  2:2713232/1‑93 (MQ=255)

                                                                                       tacacctTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTCgccgcc  >  1:5016303/1‑93 (MQ=255)

                                                                                       tacacctTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTCgccgcc  >  1:7727958/1‑93 (MQ=255)

CACTGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACGCCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTCGCCGCC  >  NC_000913/1709032‑1709211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`