BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,739,307	G→A	intergenic (+161/‑130)	ydhC → / → cfa	putative transport protein/cyclopropane fatty acyl phospholipid synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,739,307	0	G	A	100.0%	684.3 / NA	189	intergenic (+161/‑130)	ydhC/cfa	putative transport protein/cyclopropane fatty acyl phospholipid synthase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (94/95); total (94/95)

Only 100 of 191 total aligned reads displayed.

TAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCTACGC  >  NC_000913/1739218‑1739396

tAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGt                                                                                        >  2:5998250/1‑93 (MQ=255)

 aaTTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGtt                                                                                       >  1:5086470/1‑93 (MQ=255)

 aaTTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGtt                                                                                       <  1:6665061/93‑1 (MQ=255)

 aaTTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGtt                                                                                       <  1:3595583/93‑1 (MQ=255)

  aTTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTtc                                                                                      >  2:7377883/1‑93 (MQ=255)

   tttCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTtcc                                                                                     <  2:3484969/93‑1 (MQ=255)

   tttCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTtcc                                                                                     <  2:1354508/93‑1 (MQ=255)

   tttCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTtcc                                                                                     >  2:6730479/1‑93 (MQ=255)

      cGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTtcctcc                                                                                  <  1:1281011/93‑1 (MQ=255)

      cGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTtcctcc                                                                                  <  2:5913977/93‑1 (MQ=255)

       gAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGGTcctcct                                                                                 >  2:3262617/1‑93 (MQ=255)

       gAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGCTcctcct                                                                                 >  1:3684958/1‑93 (MQ=255)

          ttgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGCCAAAGGATCCTCCTTTc                                                                              >  1:5274319/1‑93 (MQ=255)

           tgttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTcc                                                                             <  2:5245626/93‑1 (MQ=255)

            tttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTccc                                                                            <  1:7137878/92‑1 (MQ=255)

             ttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGTCTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCct                                                                           <  1:3911163/93‑1 (MQ=255)

             ttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCct                                                                           <  1:3419887/93‑1 (MQ=255)

             ttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCct                                                                           >  1:250636/1‑93 (MQ=255)

             ttAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGGTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCct                                                                           <  1:1922893/93‑1 (MQ=255)

              tAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCctc                                                                          <  2:7595960/93‑1 (MQ=255)

                  gCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGtt                                                                      >  1:1582082/1‑93 (MQ=255)

                   cTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTc                                                                     <  1:4446111/93‑1 (MQ=255)

                    tACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCt                                                                    >  2:2863528/1‑93 (MQ=255)

                    tACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCt                                                                    <  1:2101752/93‑1 (MQ=255)

                    gaCGATAAATATTATGTTTTGACGGGGACAGGCTCGTTCCCGACTCACGATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCt                                                                    <  2:6146589/92‑1 (MQ=255)

                      cGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTAc                                                                  <  2:2746616/93‑1 (MQ=255)

                      cGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTAc                                                                  <  2:2746615/93‑1 (MQ=255)

                       gATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACg                                                                 >  1:2898750/1‑93 (MQ=255)

                       gATAAATATTATGCTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACg                                                                 >  2:433528/1‑93 (MQ=255)

                         tAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTc                                                               >  2:7877031/1‑93 (MQ=255)

                         tAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTc                                                               >  2:6259393/1‑93 (MQ=255)

                           aaTATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCgg                                                             <  1:6934246/93‑1 (MQ=255)

                            atatTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGa                                                            >  1:7774083/1‑93 (MQ=255)

                            atatTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGa                                                            >  1:7354593/1‑93 (MQ=255)

                            atatTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGa                                                            <  1:4041490/93‑1 (MQ=255)

                            atatTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGa                                                            >  1:1130570/1‑93 (MQ=255)

                             tattatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGAt                                                           <  1:5900647/93‑1 (MQ=255)

                              attatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGAtt                                                          <  1:5040688/93‑1 (MQ=255)

                              attatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGAtt                                                          >  1:4276764/1‑93 (MQ=255)

                               ttatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATta                                                         >  2:1895155/1‑93 (MQ=255)

                               ttatGTTTTTACGGGGACAAGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTGCCCTCTGTTCTACGTCGGATta                                                         <  1:6140173/93‑1 (MQ=255)

                                tatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtat                                                        <  1:91335/93‑1 (MQ=255)

                                tatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtat                                                        <  2:5983853/93‑1 (MQ=255)

                                tatGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtat                                                        <  2:3971813/93‑1 (MQ=255)

                                 atGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATtata                                                       >  2:2354473/1‑93 (MQ=255)

                                     ttttACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACt                                                   <  1:5719726/93‑1 (MQ=255)

                                      tttACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTc                                                  <  2:4256085/93‑1 (MQ=255)

                                      tttACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTc                                                  <  2:3725564/93‑1 (MQ=255)

                                      tttACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTc                                                  <  1:4205544/93‑1 (MQ=255)

                                        tACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTcgc                                                <  2:5978898/93‑1 (MQ=255)

                                        tACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTcgc                                                <  1:7919184/93‑1 (MQ=255)

                                            gggACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtt                                            >  2:5442504/1‑93 (MQ=255)

                                            gggACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtt                                            >  1:3158061/1‑93 (MQ=255)

                                            gggACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtt                                            >  1:2249121/1‑93 (MQ=255)

                                             ggACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGttt                                           <  2:1069985/93‑1 (MQ=255)

                                              gACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtttt                                          >  2:201702/1‑93 (MQ=255)

                                               aCAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGttttt                                         >  1:6298099/1‑93 (MQ=255)

                                               aCAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGttttt                                         >  1:275254/1‑93 (MQ=255)

                                               aCAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTAAGTCGGGTTATAGAATCGCTGttttt                                         >  1:2933190/1‑93 (MQ=255)

                                                cAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGtttttt                                        >  2:1817103/1‑93 (MQ=255)

                                                 aGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTc                                       <  2:7523336/93‑1 (MQ=255)

                                                 aGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTc                                       <  1:3887005/93‑1 (MQ=255)

                                                  ggATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCt                                      >  1:100924/1‑93 (MQ=255)

                                                    aTCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGc                                    <  1:566298/93‑1 (MQ=255)

                                                     tCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCg                                   >  2:1518164/1‑93 (MQ=255)

                                                       gTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCgag                                 >  2:5100211/1‑93 (MQ=255)

                                                       gTTCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCgag                                 <  1:2993280/93‑1 (MQ=255)

                                                        ttCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCgaga                                <  2:3857868/93‑1 (MQ=255)

                                                        ttCCCGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCgaga                                >  2:5525654/1‑93 (MQ=255)

                                                         tCCCGACTCACTATGGATAATCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGAt                               >  2:7181308/1‑93 (MQ=255)

                                                           ccGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGAttt                             <  2:2958645/93‑1 (MQ=255)

                                                           ccGACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGAttt                             >  1:6100327/1‑93 (MQ=255)

                                                             gACTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTtct                           <  1:7315527/93‑1 (MQ=255)

                                                             gACTCACTATGGATAGTCATTTCGGCAAAGGGTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTTTGCGAGAttttt                           >  1:4683232/1‑91 (MQ=255)

                                                               cTCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTca                         <  2:7928734/93‑1 (MQ=255)

                                                                tCACTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTcac                        >  2:5653313/1‑93 (MQ=255)

                                                                  aCTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACaa                      <  1:1614755/93‑1 (MQ=255)

                                                                  aCTATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACaa                      >  2:5340165/1‑93 (MQ=255)

                                                                    tATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAg                    <  1:1300733/93‑1 (MQ=255)

                                                                    tATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAg                    <  1:2362585/93‑1 (MQ=255)

                                                                    tATGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAg                    <  1:4912783/93‑1 (MQ=255)

                                                                     aTGGATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGc                   <  1:4534832/93‑1 (MQ=255)

                                                                        gATAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCa                >  1:3472603/1‑93 (MQ=255)

                                                                          tAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaaa              >  2:4995877/1‑93 (MQ=255)

                                                                          tAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaaa              >  1:7217414/1‑93 (MQ=255)

                                                                          tAGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaaa              >  1:5536158/1‑93 (MQ=255)

                                                                           aGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaaaa             >  2:130853/1‑93 (MQ=255)

                                                                           aGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCaaaa             <  2:5798401/93‑1 (MQ=255)

                                                                           aGTCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTCTTTTATGCCAGCTTTCTCACAAACCCCaaca             >  1:2026735/1‑91 (MQ=255)

                                                                             tCATTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAg           >  1:7492827/1‑93 (MQ=255)

                                                                               aTTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCg         >  1:726306/1‑93 (MQ=255)

                                                                               aTTTCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGGTTTTTCTGCGAGATTTCTCACAAAACCCAAAAAACg         >  2:5565562/1‑93 (MQ=255)

                                                                                tttCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGt        >  2:1000499/1‑93 (MQ=255)

                                                                                 ttCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTc       <  1:3289461/93‑1 (MQ=255)

                                                                                  tCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCt      <  1:5999920/93‑1 (MQ=255)

                                                                                  tCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCt      <  1:7164495/93‑1 (MQ=255)

                                                                                  tCGGCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCt      <  2:2659702/93‑1 (MQ=255)

                                                                                  tCGGCAAAGGTTCCTCATTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCt      <  1:7021300/93‑1 (MQ=255)

                                                                                   tggCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCTa     <  1:4280027/92‑1 (MQ=255)

                                                                                     gCAAAGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCTACg   >  2:6481664/1‑93 (MQ=255)

TAATTTCGAGTTGTTAAAGCTACGATAAATATTATGTTTTTACGGGGACAGGATCGTTCCCGACTCACTATGGATAGTCATTTCGGCAAGGGTTCCTCCTTTCCCTCTGTTCTACGTCGGATTATAGACTCGCGGTTTTTTCTGCGAGATTTCTCACAAAGCCCAAAAAGCGTCTACGC  >  NC_000913/1739218‑1739396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`