BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,759,287	G→A	L177L (CTG→TTG)	ynhC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,759,287	0	G	A	99.5%	697.2 / NA	194	L177L (CTG→TTG)	ynhC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (94/99); minor base C (1/0); total (95/99)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 215 total aligned reads displayed.

CGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGC  >  NC_000913/1759197‑1759375

cGTTTATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaat                                                                                        <  1:6904336/93‑1 (MQ=255)

 gTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatc                                                                                       <  1:7661460/93‑1 (MQ=255)

 gTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatc                                                                                       >  1:5532528/1‑93 (MQ=255)

    gATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccag                                                                                    >  2:7248736/1‑93 (MQ=255)

    gATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccag                                                                                    >  2:492/1‑93 (MQ=255)

     aTAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccaga                                                                                   >  1:3581325/1‑93 (MQ=255)

      tAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccagat                                                                                  >  2:6095936/1‑93 (MQ=255)

      tAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccagat                                                                                  >  1:6311887/1‑93 (MQ=255)

       aGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAgatg                                                                                 <  2:2249191/93‑1 (MQ=255)

        gTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCACATCCAgatga                                                                                >  2:1279377/1‑93 (MQ=255)

        gTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAgatga                                                                                <  1:2615440/93‑1 (MQ=255)

        gTGAACAGTTCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTGAATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAgatga                                                                                <  2:1184342/93‑1 (MQ=255)

         tGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAgatgat                                                                               <  2:826549/93‑1 (MQ=255)

            aCCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTc                                                                            <  1:4758507/93‑1 (MQ=255)

               gTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGt                                                                         >  2:2441051/1‑93 (MQ=255)

                tGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTa                                                                        <  2:2390043/93‑1 (MQ=255)

                 gCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTaa                                                                       <  2:4457948/93‑1 (MQ=255)

                 gCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTaa                                                                       <  1:6032279/93‑1 (MQ=255)

                   cccGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATg                                                                     >  1:1703265/1‑93 (MQ=255)

                    ccGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATgg                                                                    >  1:686301/1‑93 (MQ=255)

                    ccGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATgg                                                                    <  2:7904994/93‑1 (MQ=255)

                     cGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATggg                                                                   <  1:5112073/93‑1 (MQ=255)

                       gTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCa                                                                 >  2:6952359/1‑93 (MQ=255)

                         aaaaTGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAgt                                                               <  1:7513924/93‑1 (MQ=255)

                         aaaaTGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAgt                                                               <  1:3956872/93‑1 (MQ=255)

                         aaaaTGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAgt                                                               <  1:5601929/93‑1 (MQ=255)

                           aaTGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACAGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAACGGGCAgtgc                                                             >  1:6659947/1‑92 (MQ=255)

                               aCGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCAc                                                         >  2:6273656/1‑93 (MQ=255)

                                   gCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACctct                                                     <  2:59021/93‑1 (MQ=255)

                                     atcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTc                                                   >  1:2361338/1‑93 (MQ=255)

                                     atcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTc                                                   >  2:2618242/1‑93 (MQ=255)

                                      tcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCa                                                  >  2:4870703/1‑93 (MQ=255)

                                      tcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTcc                                                  >  2:3368786/1‑92 (MQ=255)

                                      tcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCa                                                  <  2:1619490/93‑1 (MQ=255)

                                       catTCAGGCTGACAAAATGTTCGATCATCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCAc                                                 <  1:95525/93‑1 (MQ=255)

                                       catTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCAc                                                 <  2:802347/93‑1 (MQ=255)

                                       catTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCAc                                                 <  2:1222046/93‑1 (MQ=255)

                                        atTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCAcc                                                <  1:2878003/93‑1 (MQ=255)

                                         ttCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCt                                               >  2:6530900/1‑93 (MQ=255)

                                         ttCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCt                                               >  2:2485249/1‑93 (MQ=255)

                                          tCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCCCCTCTTCACCTg                                              <  2:3676520/93‑1 (MQ=255)

                                          tCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTg                                              <  2:1957564/93‑1 (MQ=255)

                                           cAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGc                                             >  1:200345/1‑93 (MQ=255)

                                            aGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGcc                                            >  1:2456415/1‑93 (MQ=255)

                                            aGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGcc                                            >  2:7575223/1‑93 (MQ=255)

                                             ggCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCa                                           <  2:5617924/93‑1 (MQ=255)

                                              gCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCAc                                          <  2:3174963/93‑1 (MQ=255)

                                                 gACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGcc                                       >  1:6274458/1‑93 (MQ=255)

                                                  gcAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGccc                                      <  1:1670438/92‑1 (MQ=255)

                                                  aCAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGccc                                      <  2:5271243/93‑1 (MQ=255)

                                                  aCAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGccc                                      <  1:2105273/93‑1 (MQ=255)

                                                  aCAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGccc                                      <  1:3551283/93‑1 (MQ=255)

                                                  aCAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGACGACGGTAATGGGCAGTGTTCACCTCTTCACCCGCCACGccc                                      >  2:7019777/1‑93 (MQ=255)

                                                    aaaaTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTg                                    >  2:4801537/1‑93 (MQ=255)

                                                      aaTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTggg                                  <  2:2914943/93‑1 (MQ=255)

                                                         gTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGa                               <  1:616912/93‑1 (MQ=255)

                                                         gTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGa                               <  2:6775010/93‑1 (MQ=255)

                                                           tCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGata                             <  2:6224785/93‑1 (MQ=255)

                                                           tCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGata                             <  1:702461/93‑1 (MQ=255)

                                                            cGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGatat                            <  1:3824658/93‑1 (MQ=255)

                                                             gATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATg                           <  2:3329132/93‑1 (MQ=255)

                                                              aTCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGc                          <  1:1097163/93‑1 (MQ=255)

                                                               tCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCa                         <  2:2010176/93‑1 (MQ=255)

                                                               tCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCa                         <  2:2358078/93‑1 (MQ=255)

                                                                cACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAt                        <  1:2819459/93‑1 (MQ=255)

                                                                cACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAt                        <  1:3518123/93‑1 (MQ=255)

                                                                cACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAt                        <  2:3931383/93‑1 (MQ=255)

                                                                 cccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAtt                       <  1:6498212/92‑1 (MQ=255)

                                                                 aCCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAtt                       >  1:1575972/1‑93 (MQ=255)

                                                                  ccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTa                      >  1:2893393/1‑93 (MQ=255)

                                                                  ccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCCCCTGCCACGCCCTGGGTGATATGCATTa                      <  2:4530257/93‑1 (MQ=255)

                                                                  ccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTa                      >  1:1043716/1‑93 (MQ=255)

                                                                  ccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTa                      >  2:1730352/1‑93 (MQ=255)

                                                                   cGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTaa                     >  1:2514445/1‑93 (MQ=255)

                                                                    gTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAAc                    >  1:1448233/1‑93 (MQ=255)

                                                                    gTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAAc                    >  2:6627747/1‑93 (MQ=255)

                                                                    gTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAAc                    <  1:2199955/93‑1 (MQ=255)

                                                                     ttGCTTCGGCACCTTCCGCTAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACa                   <  2:6348646/93‑1 (MQ=255)

                                                                     ttGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACa                   >  1:5626354/1‑93 (MQ=255)

                                                                      tGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAg                  >  1:7238749/1‑93 (MQ=255)

                                                                       gCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGc                 >  2:7353150/1‑93 (MQ=255)

                                                                        cTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCa                >  2:4745542/1‑93 (MQ=255)

                                                                         ttCTGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCaa               >  1:1404979/1‑93 (MQ=255)

                                                                         ttCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCaa               >  1:4571327/1‑93 (MQ=255)

                                                                          tCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAAt              <  2:1944043/93‑1 (MQ=255)

                                                                            ggCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATgg            >  1:3205903/1‑93 (MQ=255)

                                                                             gccccTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGc           <  2:4123429/90‑1 (MQ=255)

                                                                             gCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGc           <  1:123253/93‑1 (MQ=255)

                                                                             gCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGc           <  2:3309365/93‑1 (MQ=255)

                                                                             gCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGc           <  1:6702148/93‑1 (MQ=255)

                                                                             gCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGc           <  1:1729436/93‑1 (MQ=255)

                                                                              cACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCt          <  1:3457349/93‑1 (MQ=255)

                                                                              cACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCt          >  2:4262447/1‑93 (MQ=255)

                                                                               aCCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCtt         >  2:3986848/1‑93 (MQ=255)

                                                                               aCCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCtt         >  2:7759640/1‑93 (MQ=255)

                                                                                ccTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCttt        >  2:1313759/1‑93 (MQ=255)

                                                                                ccTTCCGCCAAATCCAGATGATGGCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCttt        <  2:7530483/93‑1 (MQ=255)

                                                                                   tCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgcc     >  1:1195423/1‑93 (MQ=255)

                                                                                   tCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACACCAATGGCTTTgcc     >  2:4608476/1‑93 (MQ=255)

                                                                                     cGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccgg   <  1:5447798/93‑1 (MQ=255)

CGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGC  >  NC_000913/1759197‑1759375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`