Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,863,065 G→A A199V (GCC→GTC)  b1781 ← putative aldehyde reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,863,0650GA99.5% 703.2 / ‑5.5 201A199V (GCC→GTC) b1781putative aldehyde reductase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (113/87);  total (113/88)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.18e-01

Only 100 of 210 total aligned reads displayed.

GCCAACAATACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGGCCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGAACCGAGA  >  NC_000913/1862975‑1863154
                                                                                          |                                                                                         
 ccAACAATACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCt                                                                                        >  1:1360430/1‑93 (MQ=255)
 ccAACAATACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCt                                                                                        <  2:3801789/93‑1 (MQ=255)
 ccAACAATACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCt                                                                                        >  1:1958287/1‑93 (MQ=255)
  caacaaTACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTg                                                                                       <  2:1366672/93‑1 (MQ=255)
   aacaaTACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTgg                                                                                      >  1:7051952/1‑93 (MQ=255)
    acaaTACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTggg                                                                                     >  1:2530290/1‑93 (MQ=255)
     caaTACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGc                                                                                    <  2:7060672/93‑1 (MQ=255)
     caaTACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGc                                                                                    <  2:5555273/93‑1 (MQ=255)
        tACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTaa                                                                                 <  1:1620032/93‑1 (MQ=255)
        tACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTaa                                                                                 <  1:7348782/93‑1 (MQ=255)
         aCTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAAc                                                                                <  2:5622445/93‑1 (MQ=255)
                  gcgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTaa                                                                       <  2:7141242/93‑1 (MQ=255)
                  gcgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTaa                                                                       <  2:288103/93‑1 (MQ=255)
                  gcgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTaa                                                                       <  2:106458/93‑1 (MQ=255)
                  gcgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTaa                                                                       <  1:5654581/93‑1 (MQ=255)
                   cgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAg                                                                      >  1:2080903/1‑93 (MQ=255)
                   cgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAg                                                                      >  2:6098053/1‑93 (MQ=255)
                   cgcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAg                                                                      >  1:7283575/1‑93 (MQ=255)
                    gcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGc                                                                     >  2:2634580/1‑93 (MQ=255)
                    gcTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGc                                                                     >  2:240393/1‑93 (MQ=255)
                     cTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGcc                                                                    <  2:5273504/93‑1 (MQ=255)
                      tGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCa                                                                   >  2:1013115/1‑93 (MQ=255)
                      tGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCa                                                                   >  1:5357465/1‑93 (MQ=255)
                      tGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCa                                                                   <  1:6119943/93‑1 (MQ=255)
                        atatTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATc                                                                 >  1:4491393/1‑93 (MQ=255)
                         tatTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCa                                                                >  2:4238412/1‑93 (MQ=255)
                         tatTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCa                                                                >  1:1384691/1‑93 (MQ=255)
                           ttGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCAcc                                                              >  2:5486218/1‑93 (MQ=255)
                             gtgAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCgg                                                            >  2:4734635/1‑93 (MQ=255)
                             gtgAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCgg                                                            <  1:6502920/93‑1 (MQ=255)
                             gtgAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCgg                                                            >  1:5919615/1‑93 (MQ=255)
                              tgAGCATGTGTAATTTCGTTGACTTTCGCGTTTTTTAATAGTCCATTGCGCAACCTCCCGATCTGTTCTAACGGACTGTAAGTCATCATCGGc                                                           >  2:7247439/1‑93 (MQ=255)
                                 gcttgtgCATTTTTGTTGACTACCGCTTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATc                                                        <  2:7584448/90‑1 (MQ=255)
                                  cATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATct                                                       >  2:267194/1‑93 (MQ=255)
                                  cATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATct                                                       <  2:2155948/93‑1 (MQ=255)
                                  cATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATct                                                       >  2:4973633/1‑93 (MQ=255)
                                    tgtgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCATCCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgc                                                     <  2:3323923/93‑1 (MQ=255)
                                    tgtgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgc                                                     <  1:7499531/93‑1 (MQ=255)
                                    tgtgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgc                                                     >  2:5824305/1‑93 (MQ=255)
                                    tgtgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgc                                                     >  1:1196703/1‑93 (MQ=255)
                                     gtgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCAgctgct                                                    >  2:2725757/1‑93 (MQ=255)
                                     gtgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgct                                                    >  2:120991/1‑93 (MQ=255)
                                      tgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGTCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgctg                                                   >  1:151897/1‑93 (MQ=255)
                                      tgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgctg                                                   <  1:4375388/93‑1 (MQ=255)
                                      tgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATctgctg                                                   >  1:4430963/1‑93 (MQ=255)
                                      tgCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACAGGCATctgctg                                                   >  2:4600127/1‑93 (MQ=255)
                                        cAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGtt                                                 <  1:4813483/93‑1 (MQ=255)
                                         aaTTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTg                                                >  2:3641439/1‑93 (MQ=255)
                                         aaTTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTg                                                >  1:899049/1‑93 (MQ=255)
                                          aTTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGc                                               <  1:3069076/93‑1 (MQ=255)
                                          aTTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGc                                               <  1:3455854/93‑1 (MQ=255)
                                          aTTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGc                                               >  2:1348357/1‑93 (MQ=255)
                                          aTTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGCCTAACGGACTGTAAACCATCCCCGGCATCGGCTGTTGc                                               >  1:4849017/1‑93 (MQ=255)
                                           tttCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCt                                              >  1:4145240/1‑93 (MQ=255)
                                            ttCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTg                                             <  2:6398483/93‑1 (MQ=255)
                                             tCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTgg                                            <  2:920142/93‑1 (MQ=255)
                                               gTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCACGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCa                                          >  2:407967/1‑93 (MQ=255)
                                                ttGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCAc                                         >  1:5580032/1‑93 (MQ=255)
                                                 tGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCAcc                                        >  1:1006561/1‑93 (MQ=255)
                                                 tGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCAcc                                        >  1:5238098/1‑93 (MQ=255)
                                                    ctgccGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAgg                                     <  1:5847228/90‑1 (MQ=255)
                                                     tACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAggg                                    <  1:2637114/93‑1 (MQ=255)
                                                     tACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAggg                                    <  2:5103543/93‑1 (MQ=255)
                                                     tACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAggg                                    >  1:5934391/1‑93 (MQ=255)
                                                      tccGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAgggg                                   <  2:7778091/92‑1 (MQ=255)
                                                      aCCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAgggg                                   >  1:3599936/1‑93 (MQ=255)
                                                        cgcgTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAg                                 >  2:4993764/1‑93 (MQ=255)
                                                        cgcgTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAg                                 >  2:1953453/1‑93 (MQ=255)
                                                         gcgTTTTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGt                                <  1:2695687/93‑1 (MQ=255)
                                                          cgTTGTTTAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTa                               <  2:7855612/93‑1 (MQ=255)
                                                            ttttttAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGa                             >  2:6862925/1‑93 (MQ=255)
                                                            tattttAGCAGTCCATTGTGCAGCCGCCCGACCTGGGCTGACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGa                             <  2:7914378/91‑1 (MQ=255)
                                                             tttttAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGAt                            <  2:6018820/93‑1 (MQ=255)
                                                             tttttAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGCAGAt                            <  1:452242/93‑1 (MQ=255)
                                                                 tAACAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTa                        >  1:4397865/1‑93 (MQ=255)
                                                                  aaCAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTTCTGTTGCTGGCACCAGGGGAGTAGATCGTAc                       <  1:790593/93‑1 (MQ=255)
                                                                   aCAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACt                      >  2:6566438/1‑93 (MQ=255)
                                                                   aCAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACt                      >  2:5213262/1‑93 (MQ=255)
                                                                   aCAGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACt                      >  2:7357592/1‑93 (MQ=255)
                                                                     aGTCCATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCa                    >  1:5321044/1‑93 (MQ=255)
                                                                       tCCATTGCGCAACCGCCCGACCTGGGCTAACGGTCTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAAt                  <  1:5426877/93‑1 (MQ=255)
                                                                        ccATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAAtt                 <  2:5317040/93‑1 (MQ=255)
                                                                         cATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTc                >  1:2979435/1‑93 (MQ=255)
                                                                         cATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTc                <  1:2288696/93‑1 (MQ=255)
                                                                         cATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTc                >  1:4991811/1‑93 (MQ=255)
                                                                         cATTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTc                >  2:2527971/1‑93 (MQ=255)
                                                                          aTTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTcc               >  1:3538991/1‑93 (MQ=255)
                                                                          aTTGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTcc               <  1:5218615/93‑1 (MQ=255)
                                                                           ttGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCt              >  1:3791264/1‑93 (MQ=255)
                                                                           ttGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCt              >  2:5733524/1‑93 (MQ=255)
                                                                           ttGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCt              <  1:3661450/93‑1 (MQ=255)
                                                                            tGCGCAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTc             <  2:6658289/93‑1 (MQ=255)
                                                                               gcAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTg          >  2:6324173/1‑93 (MQ=255)
                                                                                cAACCGCCGGCCCTGTGCCAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGCCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGa         <  2:3086605/93‑1 (MQ=255)
                                                                                cAACCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGa         >  1:2269875/1‑93 (MQ=255)
                                                                                 aaCCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGaa        <  1:6154218/93‑1 (MQ=255)
                                                                                  aCCGCCCGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGAAc       <  2:1586635/93‑1 (MQ=255)
                                                                                      cccGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGAACCgag   >  1:7261157/1‑93 (MQ=255)
                                                                                       ccGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGAACCgaga  >  1:4177651/1‑93 (MQ=255)
                                                                                       ccGACCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGAACCgaga  <  2:2261741/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCCAACAATACTTGTGCCGCGCTGATATTGTGAGCATGTGCAATTTCGTTGACTACCGCGTTTTTTAACAGTCCATTGCGCAACCGCCCGGCCTGGGCTAACGGACTGTAAGCCATCACCGGCATCTGCTGTTGCTGGCACCAGGGGAGTAGATCGTACTCAATTCCTCGTGAACCGAGA  >  NC_000913/1862975‑1863154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: