BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,923,720	T→C	V86A (GTT→GCT)	b1843 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,923,720	0	T	C	99.5%	693.7 / NA	219	V86A (GTT→GCT)	b1843	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (110/108); minor base A (1/0); total (111/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 222 total aligned reads displayed.

CCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCAT  >  NC_000913/1923630‑1923809

cccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTg                                                                                         <  1:1348307/93‑1 (MQ=255)

cccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTg                                                                                         >  1:5303910/1‑93 (MQ=255)

 ccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGa                                                                                        >  1:7869314/1‑93 (MQ=255)

 ccTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGa                                                                                        <  1:6533416/93‑1 (MQ=255)

  cTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGaa                                                                                       <  2:247084/93‑1 (MQ=255)

   ttCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAat                                                                                      >  1:7441645/1‑93 (MQ=255)

   ttCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAat                                                                                      >  1:1949347/1‑93 (MQ=255)

    tCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAata                                                                                     >  1:2460555/1‑93 (MQ=255)

     ccTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAatat                                                                                    >  1:1116920/1‑93 (MQ=255)

          cccACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGa                                                                               >  2:4052616/1‑93 (MQ=255)

           ccACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGAt                                                                              <  1:6507642/93‑1 (MQ=255)

            cACCCGGTCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATc                                                                             <  1:1304982/93‑1 (MQ=255)

              cccGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGc                                                                           <  2:1761615/93‑1 (MQ=255)

                cGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACTATCGCtt                                                                         >  1:6991774/1‑93 (MQ=255)

                cGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCtt                                                                         >  2:2178280/1‑93 (MQ=255)

                  aTCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTa                                                                       >  2:7127437/1‑93 (MQ=255)

                   tctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTAt                                                                      >  2:6137045/1‑93 (MQ=255)

                   tctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCGTCCCGCTGAATATAACGATCCCTTTAt                                                                      >  2:4045818/1‑93 (MQ=255)

                    ctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTAtt                                                                     <  2:4187671/93‑1 (MQ=255)

                    ctctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTAtt                                                                     <  1:3130365/93‑1 (MQ=255)

                     tctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTc                                                                    >  1:576489/1‑93 (MQ=255)

                     tctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTGCCCGCTGAATATAACGATCGCTTTATTc                                                                    <  1:277201/93‑1 (MQ=255)

                      ctcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCg                                                                   <  1:769854/93‑1 (MQ=255)

                       tcACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGt                                                                  >  2:4941709/1‑93 (MQ=255)

                         aCTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTgg                                                                <  2:3613782/93‑1 (MQ=255)

                         aCTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTgg                                                                <  2:722514/93‑1 (MQ=255)

                          cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGTCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa                                                               >  2:5999450/1‑93 (MQ=255)

                          cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa                                                               >  2:6328766/1‑93 (MQ=255)

                          cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa                                                               >  2:5241113/1‑93 (MQ=255)

                          cTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGa                                                               <  2:2371715/93‑1 (MQ=255)

                           tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa                                                              <  2:5778359/93‑1 (MQ=255)

                           tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa                                                              <  1:6631929/93‑1 (MQ=255)

                           tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa                                                              <  1:1011870/93‑1 (MQ=255)

                           tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa                                                              >  1:5819262/1‑93 (MQ=255)

                           tGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGaa                                                              >  2:3000822/1‑93 (MQ=255)

                            gTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAt                                                             >  2:5948394/1‑93 (MQ=255)

                            gTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAt                                                             <  2:1977836/93‑1 (MQ=255)

                             ttAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAAtt                                                            <  2:5450304/93‑1 (MQ=255)

                              tAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTg                                                           >  2:7683084/1‑93 (MQ=255)

                                  cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt                                                       <  2:3124235/93‑1 (MQ=255)

                                  cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt                                                       <  2:2293180/93‑1 (MQ=255)

                                  cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt                                                       <  1:6010061/93‑1 (MQ=255)

                                  cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt                                                       >  1:7148140/1‑93 (MQ=255)

                                  cccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt                                                       >  1:7265327/1‑93 (MQ=255)

                                  cccGCTTTGTTATGCCGCAACGAACTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgt                                                       <  2:4343890/93‑1 (MQ=255)

                                   ccGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGgtg                                                      >  2:6811418/1‑93 (MQ=255)

                                     gCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGtt                                                    >  1:7578244/1‑93 (MQ=255)

                                       tttGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCg                                                  >  1:3802442/1‑93 (MQ=255)

                                       tttGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCg                                                  >  2:3913317/1‑93 (MQ=255)

                                       ttggTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCg                                                  <  1:887515/90‑1 (MQ=255)

                                         tGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCa                                                <  2:3425774/93‑1 (MQ=255)

                                          gTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAc                                               >  1:2063424/1‑93 (MQ=255)

                                          gTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAc                                               <  2:1180285/93‑1 (MQ=255)

                                          gTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCAc                                               <  2:5098729/93‑1 (MQ=255)

                                             aTGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGt                                            <  2:638140/93‑1 (MQ=255)

                                              tGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTg                                           <  2:5601117/93‑1 (MQ=255)

                                              tGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTg                                           >  1:4680997/1‑93 (MQ=255)

                                               gCCGCAACGACCTGGCGAATGACCATCATTGCCGTCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTgg                                          <  2:7895754/93‑1 (MQ=255)

                                                   cAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaa                                      >  2:1600381/1‑93 (MQ=255)

                                                   cAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaa                                      >  2:4559985/1‑93 (MQ=255)

                                                     aCGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaa                                    <  1:4813098/93‑1 (MQ=255)

                                                     aCGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaa                                    >  1:944882/1‑93 (MQ=255)

                                                      cGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaaa                                   >  2:786610/1‑93 (MQ=255)

                                                      cGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGaaaaa                                   <  1:387253/93‑1 (MQ=255)

                                                          cTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGTATTGCGGTGTTCGCACCGTGGCGAAAAACGcc                               >  1:1908829/1‑93 (MQ=255)

                                                          cTGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGcc                               >  2:1233279/1‑93 (MQ=255)

                                                           tGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCt                              >  2:6268091/1‑93 (MQ=255)

                                                           tGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCt                              <  1:2227485/93‑1 (MQ=255)

                                                           tGGCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCt                              <  2:5208761/93‑1 (MQ=255)

                                                           cggCGAATGACCATCTGTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTTGCCAAAAACGCCt                              <  2:2420032/92‑1 (MQ=255)

                                                            ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg                             <  2:4915890/93‑1 (MQ=255)

                                                            ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg                             >  2:6905574/1‑93 (MQ=255)

                                                            ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg                             <  1:4204880/93‑1 (MQ=255)

                                                            ggCGAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTg                             <  2:3951873/93‑1 (MQ=255)

                                                               gAATGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGa                          <  1:547737/93‑1 (MQ=255)

                                                                aaTGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAt                         >  1:3686955/1‑93 (MQ=255)

                                                                aaTGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAt                         >  1:819341/1‑93 (MQ=255)

                                                                aaTGACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGAt                         >  1:5149893/1‑93 (MQ=255)

                                                                  tGACCATCATTGCCGGCCTTCCCGATGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAACCGCCTGGGATcc                       >  2:6899214/1‑92 (MQ=255)

                                                                   gACCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTa                      >  2:5462288/1‑93 (MQ=255)

                                                                    aCCATCATTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTAc                     <  2:7816462/93‑1 (MQ=255)

                                                                      cctcatTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCa                   <  1:1538008/91‑1 (MQ=255)

                                                                      catcatTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCa                   <  2:1693817/93‑1 (MQ=255)

                                                                      catcatTACCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCa                   <  1:7656617/93‑1 (MQ=255)

                                                                        tcatTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATc                 >  2:7476114/1‑93 (MQ=255)

                                                                         catTGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCa                >  1:6460332/1‑93 (MQ=255)

                                                                           ttGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCaga              <  2:2669367/93‑1 (MQ=255)

                                                                            tGCCGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCagag             >  1:2323082/1‑93 (MQ=255)

                                                                             tccGGCCTGCCCGCTGAATATAACGATCGCTTTATTCGTGGAATGGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGt            <  2:4741702/92‑1 (MQ=255)

                                                                               cGGCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCa          <  2:3584809/93‑1 (MQ=255)

                                                                                ggCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCAt         >  1:7388619/1‑93 (MQ=255)

                                                                                 gCCTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATg        <  2:6960902/93‑1 (MQ=255)

                                                                                  ccTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATgg       <  1:3227957/93‑1 (MQ=255)

                                                                                  ccTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATgg       <  2:5846195/93‑1 (MQ=255)

                                                                                  ccTTCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATgg       >  1:4840015/1‑93 (MQ=255)

                                                                                    ttCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTg     >  1:7615762/1‑93 (MQ=255)

                                                                                    ttCCCGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTg     >  1:4514979/1‑93 (MQ=255)

                                                                                     tCCCGCTGAATATAACGATCGCTTTATTCGTGGGATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATAGTGc    >  2:7124991/1‑93 (MQ=255)

                                                                                      cccGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCa   <  2:7306461/93‑1 (MQ=255)

                                                                                      cccGCTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCa   <  2:284606/93‑1 (MQ=255)

CCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCAT  >  NC_000913/1923630‑1923809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`