BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,963,691	G→A	A175A (GCC→GCT)	flhB ←	FlhB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,963,691	0	G	A	100.0%	691.3 / NA	192	A175A (GCC→GCT)	flhB	FlhB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (98/94); total (98/94)

Only 100 of 194 total aligned reads displayed.

TCCCACCATTGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCTTTAAG  >  NC_000913/1963601‑1963780

tCCCACCATTGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGc                                                                                         >  2:4249187/1‑93 (MQ=255)

    accaTTGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATc                                                                                     >  2:7881359/1‑93 (MQ=255)

      caTGGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCGACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCaa                                                                                   <  2:4020297/93‑1 (MQ=255)

       aTTGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAg                                                                                  >  2:708485/1‑93 (MQ=255)

       aTTGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAAACCATCGAATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAg                                                                                  <  1:7001954/93‑1 (MQ=255)

        ttGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAgc                                                                                 <  2:870335/93‑1 (MQ=255)

        ttGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAgc                                                                                 >  1:970998/1‑93 (MQ=255)

        ttGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAgc                                                                                 <  1:1621535/93‑1 (MQ=255)

         tGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAgcg                                                                                <  1:6344046/93‑1 (MQ=255)

         tGGAATGACACCAAGAACCACCAGCAGTGCGCATAGCCCTACCAAATCCATTGCATTACCCATGGCGGTCATCGGAGACTCAGCCATCAAgcc                                                                                >  2:6588805/1‑92 (MQ=255)

            aaTGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGcat                                                                             >  2:111385/1‑93 (MQ=255)

            aaTGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGcat                                                                             <  1:212396/93‑1 (MQ=255)

             aTGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGcatc                                                                            >  2:6084261/1‑93 (MQ=255)

             aTGACACCAAGCACAACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGAGcatc                                                                            >  2:2891431/1‑93 (MQ=255)

              tGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGcatca                                                                           >  2:2513668/1‑93 (MQ=255)

              tGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGcatca                                                                           <  1:2995532/93‑1 (MQ=255)

              tGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGcatca                                                                           >  2:3786779/1‑93 (MQ=255)

                acacCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCatcatc                                                                         <  1:4271594/93‑1 (MQ=255)

                acacCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCatcatc                                                                         <  1:5907876/93‑1 (MQ=255)

                acacCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCatcatc                                                                         <  1:3613262/93‑1 (MQ=255)

                acacCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCatcatc                                                                         <  2:4345858/93‑1 (MQ=255)

                  acCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTg                                                                       >  1:6190620/1‑93 (MQ=255)

                  acCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTg                                                                       <  2:674272/93‑1 (MQ=255)

                   ccAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGc                                                                      <  1:6647007/93‑1 (MQ=255)

                    cAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCg                                                                     <  1:2052895/93‑1 (MQ=255)

                    cAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCg                                                                     <  1:1856845/93‑1 (MQ=255)

                     aaGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCgg                                                                    >  2:4981890/1‑93 (MQ=255)

                       gCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGcc                                                                  >  1:5578376/1‑93 (MQ=255)

                        caccacCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCa                                                                 <  1:7374531/93‑1 (MQ=255)

                        caccacCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCa                                                                 <  1:1732555/93‑1 (MQ=255)

                         accaccAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAg                                                                >  1:4555761/1‑93 (MQ=255)

                         accaccAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAg                                                                >  1:43660/1‑93 (MQ=255)

                            gccaGCAGTGCGCAAAGCCCTACCAAATCCATCGCATTACCCATGGCGGAAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGa                                                             <  2:3893791/92‑1 (MQ=255)

                            accaGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGa                                                             <  1:5427693/93‑1 (MQ=255)

                             ccaGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGCCTCAGCCATCAAGCGCATCATCTGCGGCCAGTGAt                                                            >  2:5278263/1‑93 (MQ=255)

                             ccaGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGAt                                                            >  1:2341352/1‑93 (MQ=255)

                             ccaGCAGTGCACATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGAt                                                            >  1:1688626/1‑93 (MQ=255)

                              cagcagTGCGCAAAGCCCTACCAAATCAATCGAATACCCAATGGC‑GTTATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGc                                                          <  1:3763997/93‑1 (MQ=255)

                               agcagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGc                                                          <  1:917727/93‑1 (MQ=255)

                                gcagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGcc                                                         >  2:5005610/1‑93 (MQ=255)

                                gcagTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGcc                                                         >  2:340822/1‑93 (MQ=255)

                                   gTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCaga                                                      <  1:7799280/93‑1 (MQ=255)

                                     gcgcATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAgaga                                                    >  1:3241530/1‑93 (MQ=255)

                                           aGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAAc                                              >  2:6912353/1‑93 (MQ=255)

                                            gCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAAcc                                             >  1:3805185/1‑93 (MQ=255)

                                               cTACCAAATCCATCGCATTACCCATGGCGGTCATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAACCCCCg                                          >  1:6565858/1‑93 (MQ=255)

                                               cTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCg                                          >  2:5156266/1‑93 (MQ=255)

                                               cTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCg                                          >  2:3254445/1‑93 (MQ=255)

                                                tACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGt                                         >  1:3420265/1‑93 (MQ=255)

                                                caCCAAATCCATCGCATTACCCATGGCGGTAATCTGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGt                                         <  1:1110526/92‑1 (MQ=255)

                                                caCCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGt                                         <  1:5719900/92‑1 (MQ=255)

                                                 aCCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTc                                        >  1:554013/1‑93 (MQ=255)

                                                 aCCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTc                                        <  1:7863334/93‑1 (MQ=255)

                                                  ccAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCa                                       >  1:4581462/1‑93 (MQ=255)

                                                  ccAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCa                                       >  2:3353536/1‑93 (MQ=255)

                                                  ccAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCa                                       >  1:53104/1‑93 (MQ=255)

                                                   cAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCAc                                      >  1:2523479/1‑93 (MQ=255)

                                                    aaaTCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACg                                     >  2:2051630/1‑93 (MQ=255)

                                                    aaaTCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACg                                     >  1:3892137/1‑93 (MQ=255)

                                                     aaTCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGc                                    <  1:271051/93‑1 (MQ=255)

                                                     aaTCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGc                                    <  2:2303899/93‑1 (MQ=255)

                                                     aaTCCATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGc                                    <  2:1433439/93‑1 (MQ=255)

                                                        ccATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGGCAGGGATGCCAGAGAAAAAACCCCGTCACGCTGc                                 >  2:6675787/1‑93 (MQ=255)

                                                        ccATCGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGc                                 >  1:1195066/1‑93 (MQ=255)

                                                         cATCGCATTACCCATGGCGGTAATCGGAGACGCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGcc                                <  1:1306043/93‑1 (MQ=255)

                                                          aTCGCATTACCCATTGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACACCGTCACGCTGCCa                               >  1:3227374/1‑93 (MQ=255)

                                                            cGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAAc                             <  1:4644718/93‑1 (MQ=255)

                                                            cGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAAc                             <  2:610847/93‑1 (MQ=255)

                                                            cGCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAAc                             >  2:7688458/1‑93 (MQ=255)

                                                             gCATTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAAcc                            <  2:3013605/93‑1 (MQ=255)

                                                               aTTCCCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAg                          <  1:1420306/93‑1 (MQ=255)

                                                               aTTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAg                          >  1:58383/1‑93 (MQ=255)

                                                               aTTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAg                          >  1:4143468/1‑93 (MQ=255)

                                                               aTTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAg                          <  2:2192896/93‑1 (MQ=255)

                                                               aTTACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAg                          <  1:7405904/93‑1 (MQ=255)

                                                                ttACCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAgg                         >  2:4434187/1‑93 (MQ=255)

                                                                  aCCCATTGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCCGCCAACCAGGAt                       <  2:4947284/93‑1 (MQ=255)

                                                                  aCCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGAt                       <  1:6862081/93‑1 (MQ=255)

                                                                  aCCCATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCCGCCAACCAGGAt                       <  2:7484384/93‑1 (MQ=255)

                                                                   cccATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATg                      >  1:7926215/1‑93 (MQ=255)

                                                                    ccATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATgg                     >  2:6174990/1‑93 (MQ=255)

                                                                    ccATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATgg                     >  1:4975135/1‑93 (MQ=255)

                                                                    ccATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATgg                     >  2:32900/1‑93 (MQ=255)

                                                                     cATGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGt                    <  2:5413706/93‑1 (MQ=255)

                                                                      aTGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGtt                   >  2:6456028/1‑93 (MQ=255)

                                                                      aTGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGtt                   >  2:2703606/1‑93 (MQ=255)

                                                                       tGGCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGttt                  >  2:1698317/1‑93 (MQ=255)

                                                                         gCGGTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTc                <  1:2451721/93‑1 (MQ=255)

                                                                            gTAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCaaa             <  2:1271908/93‑1 (MQ=255)

                                                                             tAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCaaaa            <  2:1029760/93‑1 (MQ=255)

                                                                             tAATCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCaaaa            <  2:2413573/93‑1 (MQ=255)

                                                                               aTCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAAtt          >  1:1069657/1‑93 (MQ=255)

                                                                                tCGGAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGGTTTCTAAATTg         >  2:3702907/1‑93 (MQ=255)

                                                                                  ggAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCt       <  2:5860839/93‑1 (MQ=255)

                                                                                  ggAGACTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCt       <  2:721896/93‑1 (MQ=255)

                                                                                   gagaCTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCtt      <  1:5456846/93‑1 (MQ=255)

                                                                                    agaCTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCttt     <  2:4673583/93‑1 (MQ=255)

                                                                                      aCTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCTTTaa   <  2:1986684/93‑1 (MQ=255)

                                                                                      aCTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCTTTaa   <  2:510774/93‑1 (MQ=255)

                                                                                       cTCAGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCTTTAAg  >  1:824397/1‑93 (MQ=255)

TCCCACCATTGGAATGACACCAAGCACCACCAGCAGTGCGCATAGCCCTACCAAATCCATCGCATTACCCATGGCGGTAATCGGAGACTCGGCCATCAAGCGCATCATCTGCGGCCAGTGATGCCAGAGAAAAAACCCCGTCACGCTGCCAACCAGGATGGTTTTCAAAATTGCTTTAAG  >  NC_000913/1963601‑1963780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`