BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,980,319	A→G	H31H (CAT→CAC)	otsB ←	trehalose‑6‑phosphate phophatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,980,319	0	A	G	100.0%	712.7 / NA	228	H31H (CAT→CAC)	otsB	trehalose‑6‑phosphate phophatase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/101); total (127/101)

Only 100 of 236 total aligned reads displayed.

CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT  >  NC_000913/1980229‑1980408

 ccTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGc                                                                                        >  1:685143/1‑93 (MQ=255)

  cTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCg                                                                                       <  1:1193314/93‑1 (MQ=255)

     atatCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGtt                                                                                    >  2:4001375/1‑93 (MQ=255)

      tatCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGttt                                                                                   >  2:7660428/1‑93 (MQ=255)

       atCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTg                                                                                  >  1:2706051/1‑93 (MQ=255)

         caatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAt                                                                                <  2:7871276/93‑1 (MQ=255)

          catgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt                                                                               <  2:2032450/92‑1 (MQ=255)

          aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGAtt                                                                               <  1:385935/93‑1 (MQ=255)

          aatgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGGTTGAtt                                                                               >  2:51549/1‑93 (MQ=255)

            tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc                                                                             >  1:438736/1‑93 (MQ=255)

            tgccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTc                                                                             <  1:7790223/93‑1 (MQ=255)

              ccaatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCg                                                                           <  1:4066625/93‑1 (MQ=255)

               caatgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGc                                                                          >  2:7068593/1‑93 (MQ=255)

                 atgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCa                                                                        <  2:4508912/93‑1 (MQ=255)

                 atgcACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCa                                                                        >  2:7649315/1‑93 (MQ=255)

                    cACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCg                                                                     <  2:5528471/93‑1 (MQ=255)

                     aCCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGt                                                                    >  2:3603184/1‑93 (MQ=255)

                       cATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTc                                                                  <  2:1546499/93‑1 (MQ=255)

                       cATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTc                                                                  <  1:5590911/93‑1 (MQ=255)

                        ctCACTTGGGGTTTCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTcc                                                                 <  1:3701640/92‑1 (MQ=255)

                        aTCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCCGCGTTcc                                                                 >  2:5331286/1‑93 (MQ=255)

                        aTCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTcc                                                                 <  2:7512630/93‑1 (MQ=255)

                         tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa                                                                >  1:3964002/1‑93 (MQ=255)

                         tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa                                                                >  2:1262957/1‑93 (MQ=255)

                         tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCa                                                                >  1:6428463/1‑93 (MQ=255)

                         tCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGCTCCa                                                                >  2:566249/1‑93 (MQ=255)

                          cACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCAt                                                               >  2:1698345/1‑93 (MQ=255)

                          cACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCAt                                                               <  1:1346355/93‑1 (MQ=255)

                           aCTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATc                                                              <  1:6716081/93‑1 (MQ=255)

                             ttGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCaa                                                            <  1:5446307/93‑1 (MQ=255)

                              tGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAg                                                           <  2:5568747/93‑1 (MQ=255)

                                cGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGAt                                                         <  1:7678400/93‑1 (MQ=255)

                                 ggTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATc                                                        >  2:4959046/1‑93 (MQ=255)

                                  gTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCa                                                       >  2:6047901/1‑93 (MQ=255)

                                     gCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaa                                                    <  2:5870861/93‑1 (MQ=255)

                                      ccAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaa                                                   >  1:2450052/1‑93 (MQ=255)

                                       cAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaaa                                                  >  1:4739353/1‑93 (MQ=255)

                                       cAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCaaaaaa                                                  >  2:3052642/1‑93 (MQ=255)

                                        aGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAc                                                 >  1:3518092/1‑93 (MQ=255)

                                        aGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAc                                                 >  2:6911107/1‑93 (MQ=255)

                                         gTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAAcc                                                >  2:5900072/1‑93 (MQ=255)

                                          tAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCa                                               >  2:808457/1‑93 (MQ=255)

                                          tAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCa                                               <  1:3017046/93‑1 (MQ=255)

                                          tAGCTGTAGTCCTTGCAGAATATTGTAAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCa                                               >  2:7248479/1‑93 (MQ=255)

                                           aGCTGTAGTCCTTGCAGAATATTGTCAGGCCCGGCGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAg                                              <  1:7317934/93‑1 (MQ=255)

                                           aGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAg                                              <  1:4463229/93‑1 (MQ=255)

                                            gCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAgg                                             >  2:3856076/1‑93 (MQ=255)

                                              tttcgTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCa                                           <  1:2837978/89‑1 (MQ=255)

                                              tGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCa                                           <  2:4972302/93‑1 (MQ=255)

                                               gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCat                                          >  1:888794/1‑93 (MQ=255)

                                               gTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGCTCCATCAAGATCAAAAAACCAGGCat                                          >  2:5737138/1‑93 (MQ=255)

                                                tAGTCCTTGCAGAATATTGTCAGGCACGACGACCTAATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCata                                         >  1:3928528/1‑93 (MQ=255)

                                                 aGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCatat                                        <  2:3964487/93‑1 (MQ=255)

                                                  gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGTTCAAAAAACCAGGCATAtt                                       <  1:7661063/93‑1 (MQ=255)

                                                  gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAtt                                       <  1:6995680/93‑1 (MQ=255)

                                                  gTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAtt                                       <  1:3078017/93‑1 (MQ=255)

                                                   tCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAttt                                      <  1:2955835/93‑1 (MQ=255)

                                                   tCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATAttt                                      >  1:1390959/1‑93 (MQ=255)

                                                     cTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcg                                    <  2:2799335/93‑1 (MQ=255)

                                                     cTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcg                                    >  1:1804793/1‑93 (MQ=255)

                                                      ttGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgc                                   >  1:483564/1‑93 (MQ=255)

                                                      tggCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGACATATTTcgc                                   <  2:3262986/91‑1 (MQ=255)

                                                       tGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgcg                                  >  1:457634/1‑93 (MQ=255)

                                                       tGCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTcgcg                                  >  2:4704827/1‑93 (MQ=255)

                                                        gCAGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCgg                                 >  1:2006615/1‑93 (MQ=255)

                                                          aGAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGAt                               >  2:5506254/1‑93 (MQ=255)

                                                           gAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCACGATCAAAAAACCAGGCATATTTCGCGGATa                              >  1:1715922/1‑93 (MQ=255)

                                                           gAATATTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATa                              <  2:3702152/93‑1 (MQ=255)

                                                              tatTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGtt                           >  1:2599876/1‑93 (MQ=255)

                                                               atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc                          <  2:5232720/93‑1 (MQ=255)

                                                               atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc                          >  2:4559486/1‑93 (MQ=255)

                                                               atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc                          <  2:2155259/93‑1 (MQ=255)

                                                               atTGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTc                          >  1:6190580/1‑93 (MQ=255)

                                                                ttGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCa                         <  1:824324/93‑1 (MQ=255)

                                                                 tGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAg                        <  2:3156250/93‑1 (MQ=255)

                                                                 tGTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAg                        >  2:1201692/1‑93 (MQ=255)

                                                                  gTCAGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAgg                       <  2:2981476/93‑1 (MQ=255)

                                                                     aGGCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGt                    <  1:6735525/93‑1 (MQ=255)

                                                                      ggCACGACGACCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGtt                   >  2:6347103/1‑93 (MQ=255)

                                                                           gacgacCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGt              <  2:4202629/93‑1 (MQ=255)

                                                                            acgacCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGtt             >  1:3303832/1‑93 (MQ=255)

                                                                              gacCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTaa           >  2:6208878/1‑93 (MQ=255)

                                                                               acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc          >  1:7180870/1‑93 (MQ=255)

                                                                               acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc          >  1:4023105/1‑93 (MQ=255)

                                                                               acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAAc          >  1:5161094/1‑93 (MQ=255)

                                                                               acCTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGGTCAGGGGGTTCGGTTAAc          >  1:2283046/1‑93 (MQ=255)

                                                                                ccTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACg         <  1:5836911/93‑1 (MQ=255)

                                                                                ccTGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACg         <  2:6611994/93‑1 (MQ=255)

                                                                                  tGATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGt       >  2:6546657/1‑93 (MQ=255)

                                                                                   gATCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGtt      >  2:1824952/1‑93 (MQ=255)

                                                                                    aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc     <  2:6681968/93‑1 (MQ=255)

                                                                                    aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc     <  1:5897364/93‑1 (MQ=255)

                                                                                    aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc     <  1:3569690/93‑1 (MQ=255)

                                                                                    aTCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTc     <  1:520327/93‑1 (MQ=255)

                                                                                     tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt    <  1:3298918/93‑1 (MQ=255)

                                                                                     tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt    >  2:2098529/1‑93 (MQ=255)

                                                                                     tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt    >  1:3678940/1‑93 (MQ=255)

                                                                                     tCGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCt    <  1:4295312/93‑1 (MQ=255)

                                                                                      cGGGGTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTg   <  2:5492928/93‑1 (MQ=255)

                                                                                       ggggTGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGt  <  2:1743409/93‑1 (MQ=255)

CCCTGATATCAATGCCAATGCACCATCACTTGCGGTTGCCAGTAGCTGTAGTCCTTGCAGAATATTGTCAGGCACGACGACCTGATCGGGATGCGGTTTGATTTCCGCCAGCGTTCCATCAAGATCAAAAAACCAGGCATATTTCGCGGATAGTTCAGGGGTTTCGGTTAACGGTTCTGT  >  NC_000913/1980229‑1980408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`