BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,990,664	A→G	S59S (AGT→AGC)	pgsA ←	phosphatidylglycerophosphate synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,990,664	0	A	G	100.0%	678.8 / NA	216	S59S (AGT→AGC)	pgsA	phosphatidylglycerophosphate synthetase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (133/83); total (133/83)

Only 100 of 221 total aligned reads displayed.

CCAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990574‑1990753

ccaGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGct                                                                                         <  1:2309859/93‑1 (MQ=255)

  aGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGcttt                                                                                       <  2:4254685/93‑3 (MQ=255)

  aGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGcttt                                                                                       <  1:7001183/93‑3 (MQ=255)

   gCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTg                                                                                      >  2:2566097/1‑93 (MQ=255)

     tgtgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGt                                                                                    >  2:3067602/1‑93 (MQ=255)

     tgtgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGt                                                                                    >  1:2687030/1‑93 (MQ=255)

       tgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTc                                                                                  <  1:7294379/93‑1 (MQ=255)

        gATAATGCTCGGTTCCCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 <  2:381682/93‑1 (MQ=255)

        gATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 <  2:467678/93‑1 (MQ=255)

        gATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 >  2:5480499/1‑93 (MQ=255)

        gATAATGCTCGGTTACCAGCACCATGGCGATAACCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 >  2:5856148/1‑93 (MQ=255)

         aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                >  1:1232108/1‑93 (MQ=255)

            aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             >  1:206311/1‑93 (MQ=255)

            aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             <  2:3988210/93‑1 (MQ=255)

            aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcg                                                                             >  2:5676872/1‑93 (MQ=255)

            aTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAccg                                                                             >  2:7390029/1‑93 (MQ=255)

             tGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcgg                                                                            >  2:3484920/1‑93 (MQ=255)

               cTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcggcg                                                                          >  1:6081762/1‑93 (MQ=255)

                tCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGt                                                                         >  1:6654657/1‑93 (MQ=255)

                  ggTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGc                                                                       >  2:4457236/1‑93 (MQ=255)

                   gTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAGAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGcc                                                                      >  2:6565625/1‑93 (MQ=255)

                   gTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGcc                                                                      >  2:5989625/1‑93 (MQ=255)

                       ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  >  2:3415153/1‑93 (MQ=255)

                            aCCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCa                                                             <  1:47944/93‑1 (MQ=255)

                             ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            >  1:4113974/1‑93 (MQ=255)

                             ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            <  2:5386549/93‑1 (MQ=255)

                             ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            >  2:7929766/1‑93 (MQ=255)

                              cATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATc                                                           <  1:5223531/93‑1 (MQ=255)

                                  gCGATAGCCACGAGACCTTTATCTGCCACAGGGTCAAGGAAAGCACCAACCGGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAAc                                                       <  2:4230478/93‑1 (MQ=255)

                                   cGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAAcc                                                      <  1:3323885/93‑1 (MQ=255)

                                   cGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAAcc                                                      <  2:725671/93‑1 (MQ=255)

                                    gATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACca                                                     >  1:3565040/1‑93 (MQ=255)

                                     aTAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcag                                                    >  2:4816782/1‑93 (MQ=255)

                                      tAGCCACGAGACCTTTATCTGCCACAGGGTCAAGGACAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagt                                                   <  2:7039363/93‑1 (MQ=255)

                                      tAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagt                                                   >  2:3090372/1‑93 (MQ=255)

                                      tAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagt                                                   >  2:1789318/1‑93 (MQ=255)

                                      aaGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAGCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagt                                                   <  2:6108823/92‑1 (MQ=255)

                                       aGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtc                                                  <  2:2006977/93‑1 (MQ=255)

                                        gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 >  1:3516191/1‑93 (MQ=255)

                                         ccACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcag                                                >  2:2530377/1‑93 (MQ=255)

                                          cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGTGGCGTCCCAGAAAACCATCGAACcagtcagt                                               >  1:6206073/1‑93 (MQ=255)

                                          cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  2:7158814/1‑93 (MQ=255)

                                           aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              >  1:6530040/1‑93 (MQ=255)

                                             gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            <  1:7683203/93‑1 (MQ=255)

                                             gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            >  2:7447495/1‑93 (MQ=255)

                                              agaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAcc                                           <  1:2185247/93‑1 (MQ=255)

                                              agaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAcc                                           <  2:7611710/93‑1 (MQ=255)

                                               gaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccg                                          >  1:245889/1‑93 (MQ=255)

                                                aaCTTTATCTGCCACAGGGTCAAGGAAAGGACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  2:4840788/1‑93 (MQ=255)

                                                aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  2:3889186/1‑93 (MQ=255)

                                                aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  2:946870/1‑93 (MQ=255)

                                                  cTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgccg                                       >  1:99794/1‑93 (MQ=255)

                                                  cTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGACAGTCAccgccg                                       >  2:1620083/1‑93 (MQ=255)

                                                    ttATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCcgcg                                     >  1:3268900/1‑93 (MQ=255)

                                                     tATGTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAACCCATCGAACCAGTCAGTCACCGCCGCGa                                    <  2:1196935/93‑1 (MQ=255)

                                                     tATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGa                                    >  2:6185094/1‑93 (MQ=255)

                                                     tATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGa                                    <  1:1281905/93‑1 (MQ=255)

                                                       tCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGCACCAGTCAGTCACCGCCGCGACg                                  >  2:244910/1‑93 (MQ=255)

                                                           ccACAGGGTCAAGGAAAGCACCAACCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGa                              <  2:5355880/93‑1 (MQ=255)

                                                           ccACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGa                              >  1:1174957/1‑93 (MQ=255)

                                                            cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             <  1:1653137/93‑1 (MQ=255)

                                                             acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            >  2:3733902/1‑93 (MQ=255)

                                                               aGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAAt                          >  1:6811697/1‑93 (MQ=255)

                                                               aGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAAt                          <  1:1995290/93‑1 (MQ=255)

                                                               aGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAAt                          >  1:1085946/1‑93 (MQ=255)

                                                                gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         >  1:4849720/1‑93 (MQ=255)

                                                                gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         >  1:1853745/1‑93 (MQ=255)

                                                                 ggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGa                        <  2:7881899/93‑1 (MQ=255)

                                                                 gcacAACGAAAGCACCAAACCGGGTGCTCAGGTACCAGCGGCGTGCCAGAAAACCATCGAACCAGTAAGTCACAGCCGCGCCGCAGAAAATGa                        <  2:5202224/90‑1 (MQ=255)

                                                                 agTCAATGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGa                        <  2:1391660/92‑1 (MQ=255)

                                                                  gTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAg                       <  1:7406053/93‑1 (MQ=255)

                                                                   tCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgc                      <  2:2739040/93‑1 (MQ=255)

                                                                   tCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgc                      >  2:4491851/1‑93 (MQ=255)

                                                                    cAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcg                     >  2:5069407/1‑93 (MQ=255)

                                                                     aaGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcgc                    <  1:4441234/93‑1 (MQ=255)

                                                                     aaGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcgc                    <  1:3118772/93‑1 (MQ=255)

                                                                      aGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcg                   >  1:3726973/1‑93 (MQ=255)

                                                                      aGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcg                   >  1:2256559/1‑93 (MQ=255)

                                                                      aGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcg                   >  1:5666051/1‑93 (MQ=255)

                                                                         aaaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggcg                >  1:4698245/1‑93 (MQ=255)

                                                                           aGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCggcggc              >  2:4308015/1‑93 (MQ=255)

                                                                           aGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCggcggc              <  2:3760297/93‑1 (MQ=255)

                                                                            gCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCa             >  1:7217797/1‑93 (MQ=255)

                                                                             cACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaa            <  1:5675072/93‑1 (MQ=255)

                                                                              aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           >  1:143128/1‑93 (MQ=255)

                                                                              aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           >  2:2172256/1‑93 (MQ=255)

                                                                              aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           >  1:5125952/1‑93 (MQ=255)

                                                                              aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           <  1:5531702/93‑1 (MQ=255)

                                                                               ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          >  1:5015275/1‑93 (MQ=255)

                                                                               ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  2:3937107/93‑1 (MQ=255)

                                                                               ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          >  2:3589099/1‑93 (MQ=255)

                                                                                cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         >  1:3863884/1‑93 (MQ=255)

                                                                                cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         >  2:4634751/1‑93 (MQ=255)

                                                                                 aaaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACgg        <  2:1692073/93‑1 (MQ=255)

                                                                                  aaCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGc       <  1:931403/93‑1 (MQ=255)

                                                                                   aCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCg      <  1:2855415/93‑1 (MQ=255)

                                                                                      gggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAcc   <  1:3814930/93‑1 (MQ=255)

                                                                                       ggTGCTTTGGTTCCAGCGTCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCa  <  2:4111996/93‑1 (MQ=255)

                                                                                       ggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCa  <  2:2687029/93‑1 (MQ=255)

                                                                                       ggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGCCACAGCCGCGACGCAGAAAATGAGCGCGGCGGCCAACGGCGACCa  <  2:6695228/93‑1 (MQ=255)

CCAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990574‑1990753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`