BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,013,946	G→A	Q26Q (CAG→CAA)	fliH →	FliH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,013,946	0	G	A	100.0%	883.4 / NA	244	Q26Q (CAG→CAA)	fliH	FliH
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (129/115); total (129/115)

Only 100 of 251 total aligned reads displayed.

CGAGATGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAGGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAAT  >  NC_000913/2013858‑2014035

 gagaTGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCaga                                                                                      <  1:1627912/93‑1 (MQ=255)

  agaTGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCagag                                                                                     <  2:5292490/93‑1 (MQ=255)

   gaTGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGt                                                                                    >  2:1702410/1‑93 (MQ=255)

    aTGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGtt                                                                                   >  2:2109740/1‑93 (MQ=255)

     tGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGttt                                                                                  <  2:795875/93‑1 (MQ=255)

     tGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGttt                                                                                  <  2:3402485/93‑1 (MQ=255)

      ggTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGCGTTtg                                                                                 >  2:3339188/1‑93 (MQ=255)

       gTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTtgt                                                                                >  1:5674839/1‑93 (MQ=255)

       gTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTtgt                                                                                <  1:6932679/93‑1 (MQ=255)

       gTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTtgt                                                                                >  2:225219/1‑93 (MQ=255)

       gTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTtgt                                                                                <  1:101453/93‑1 (MQ=255)

         aaTTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGAAGCCGGACGATCTCGCGCCACAACAAGCAGAGTTTGTGc                                                                              >  2:5523458/1‑93 (MQ=255)

          aTTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGcc                                                                             >  1:2267185/1‑93 (MQ=255)

           ttGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGccc                                                                            >  1:1483875/1‑93 (MQ=255)

            tGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCa                                                                           <  1:4473622/93‑1 (MQ=255)

              gCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATa                                                                         >  2:2417790/1‑93 (MQ=255)

              gCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATa                                                                         <  2:3154025/93‑1 (MQ=255)

              gCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATa                                                                         <  1:2185906/93‑1 (MQ=255)

               cAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAg                                                                        <  2:2816771/93‑1 (MQ=255)

                aGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGt                                                                       <  1:2534752/93‑1 (MQ=255)

                 gcggcgAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTc                                                                      >  1:782576/1‑93 (MQ=255)

                       aGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCTACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCg                                                                <  2:6929024/93‑1 (MQ=255)

                       aGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCg                                                                >  2:6042836/1‑93 (MQ=255)

                        ggATACCTATGTCTGATAATCTGCCGTGGAAAGCCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCgg                                                               <  1:3235888/93‑1 (MQ=255)

                        ggATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCgg                                                               >  1:7693477/1‑93 (MQ=255)

                         gATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGga                                                              >  1:2417003/1‑93 (MQ=255)

                          aTACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGgaa                                                             <  2:5954934/93‑1 (MQ=255)

                          aTACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGgaa                                                             <  1:6696999/93‑1 (MQ=255)

                           tACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGgaag                                                            >  2:2846887/1‑93 (MQ=255)

                              cTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGaaa                                                         <  1:3329520/93‑1 (MQ=255)

                               tATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAAc                                                        >  1:5072320/1‑93 (MQ=255)

                               tATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAAc                                                        >  2:7156425/1‑93 (MQ=255)

                               tATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAAc                                                        >  2:1776699/1‑93 (MQ=255)

                               tATGTCTGATAATCTGCCGTGGAAAACCTGGACGACGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAAc                                                        <  2:7292712/93‑1 (MQ=255)

                                aTGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAAcc                                                       <  1:2500117/93‑1 (MQ=255)

                                aTGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAAcc                                                       >  2:4628879/1‑93 (MQ=255)

                                 tGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACca                                                      <  2:1557447/93‑1 (MQ=255)

                                 tGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACca                                                      >  2:4449488/1‑93 (MQ=255)

                                    cTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACcatca                                                   <  2:4767730/93‑1 (MQ=255)

                                    cTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACcatca                                                   <  1:425509/93‑1 (MQ=255)

                                     tGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACcatcat                                                  <  1:6017732/93‑1 (MQ=255)

                                     tGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACcatcat                                                  <  1:5263671/93‑1 (MQ=255)

                                      gATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCAtt                                                 <  1:7166652/93‑1 (MQ=255)

                                      gATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCAtt                                                 >  1:3679887/1‑93 (MQ=255)

                                      gATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCAtt                                                 >  2:6576965/1‑93 (MQ=255)

                                        tattCTGCCGTGGAAACCCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGa                                               <  2:7010954/90‑1 (MQ=255)

                                        tAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGa                                               >  2:6208393/1‑93 (MQ=255)

                                         acgcTGCCGGAGAACCCCTGATCGCCGGACGATCTCGCGCAACCACAAGCAGATTTTGCGCCCATAGTCGTGCCGGAAGAAACCATCATTTaa                                              <  2:687295/90‑1 (MQ=255)

                                         aaTCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGaa                                              >  1:1122799/1‑93 (MQ=255)

                                         aaTCTGCCGTGGAAAACCTGGACGCCCGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGaa                                              >  2:4730482/1‑93 (MQ=255)

                                           tCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAaga                                            <  2:3971687/93‑1 (MQ=255)

                                           tCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAaga                                            >  2:1857467/1‑93 (MQ=255)

                                           tCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAaga                                            >  1:3219469/1‑93 (MQ=255)

                                            cTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAagag                                           >  2:7628482/1‑93 (MQ=255)

                                            cTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAagag                                           >  2:4976955/1‑93 (MQ=255)

                                              gCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGc                                         >  2:3665422/1‑93 (MQ=255)

                                                 gTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGa                                      >  1:5437695/1‑93 (MQ=255)

                                                 gTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGa                                      >  1:6432658/1‑93 (MQ=255)

                                                 gTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGa                                      <  1:5535313/93‑1 (MQ=255)

                                                  tGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGaa                                     >  2:1954736/1‑93 (MQ=255)

                                                   ggAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAAc                                    <  2:6266309/93‑1 (MQ=255)

                                                    gAAAACCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGGTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAAcc                                   >  2:5817578/1‑93 (MQ=255)

                                                     aaaaCCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAAccc                                  >  1:7324063/1‑93 (MQ=255)

                                                     aaaaCCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAAccc                                  <  2:2511736/93‑1 (MQ=255)

                                                        aCCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGc                               >  1:6615064/1‑93 (MQ=255)

                                                        aCCTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGc                               >  1:506480/1‑93 (MQ=255)

                                                          cTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAag                                             <  2:5220496/77‑1 (MQ=255)

                                                          cTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAag                                             >  1:5220498/1‑77 (MQ=255)

                                                          cTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCt                             >  1:4674489/1‑93 (MQ=255)

                                                          cTGGACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCt                             >  1:2767839/1‑93 (MQ=255)

                                                            ggACGCCGGACGATCTCGCGCCCCCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTg                           <  2:3900731/93‑1 (MQ=255)

                                                             gACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGa                          >  1:6394224/1‑93 (MQ=255)

                                                             gACGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGa                          <  2:4652002/93‑1 (MQ=255)

                                                               cGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGagc                        <  2:6726035/93‑1 (MQ=255)

                                                               cGCCGGACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGagc                        <  2:1176183/93‑1 (MQ=255)

                                                                   ggACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAgcagca                    >  1:7444592/1‑93 (MQ=255)

                                                                    gACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCaa                   <  2:7423481/93‑1 (MQ=255)

                                                                    gACGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCaa                   >  1:7256709/1‑93 (MQ=255)

                                                                     aCGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAAc                  <  2:194016/93‑1 (MQ=255)

                                                                      cGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACt                 <  1:7482326/93‑1 (MQ=255)

                                                                      cGATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACt                 >  2:106058/1‑93 (MQ=255)

                                                                       gATCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTg                >  1:4027584/1‑93 (MQ=255)

                                                                        aTCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTgg               >  1:5779315/1‑93 (MQ=255)

                                                                        aTCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTgg               <  2:3000417/93‑1 (MQ=255)

                                                                        aTCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTgg               >  2:1133789/1‑93 (MQ=255)

                                                                        aTCTCGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTgg               >  1:1797883/1‑93 (MQ=255)

                                                                         tctcGCCCCACCACAAGCAGAGTTTGTGCCCAGAGGCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGgc              <  1:3423903/93‑1 (MQ=255)

                                                                           tcGCGCCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGgcgc            >  2:4484002/1‑93 (MQ=255)

                                                                             gcgcCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCaa          <  1:1257661/93‑1 (MQ=255)

                                                                              cgcCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAAc         <  2:5023303/93‑1 (MQ=255)

                                                                              cgcCACCACAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAAc         >  1:5973276/1‑93 (MQ=255)

                                                                                ccaccaCAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTg       >  2:7861408/1‑93 (MQ=255)

                                                                                 caccacAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGc      >  2:94842/1‑93 (MQ=255)

                                                                                  accacAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCa     >  2:5154149/1‑93 (MQ=255)

                                                                                  accacAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCa     >  1:929587/1‑93 (MQ=255)

                                                                                  accacAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCa     >  1:3912425/1‑93 (MQ=255)

                                                                                   ccacAAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCaa    <  1:4282439/93‑1 (MQ=255)

                                                                                    cacaAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCaaa   <  2:4153844/93‑1 (MQ=255)

                                                                                    cacaAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCaaa   <  2:1328335/93‑1 (MQ=255)

                                                                                    cacaAGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCaaa   <  1:3997098/93‑1 (MQ=255)

CGAGATGGTAATTGGCAGCGGCGAGGATACCTATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAGGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAAT  >  NC_000913/2013858‑2014035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`