BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,045,049	T→C	V722A (GTC→GCC)	b1978 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,045,049	0	T	C	100.0%	756.4 / NA	238	V722A (GTC→GCC)	b1978	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/119); total (119/119)

Only 100 of 250 total aligned reads displayed.

AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCG  >  NC_000913/2044959‑2045138

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                     >  1:4549270/1‑93 (MQ=255)

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                     <  2:1499863/93‑1 (MQ=255)

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                     >  1:4333799/1‑93 (MQ=255)

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                     >  2:6469836/1‑93 (MQ=255)

      aaaaaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAgg                                                                                   <  2:436814/93‑1 (MQ=255)

        aaaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCg                                                                                 >  1:6669401/1‑93 (MQ=255)

         aaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATCAGGCGa                                                                                >  2:1075355/1‑93 (MQ=255)

         aaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGa                                                                                >  2:6955047/1‑93 (MQ=255)

           cAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGAcc                                                                              <  1:3807106/93‑1 (MQ=255)

           cAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGAcc                                                                              <  2:545400/93‑1 (MQ=255)

            aGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCt                                                                             <  1:1948633/93‑1 (MQ=255)

             gCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCta                                                                            >  1:7138670/1‑93 (MQ=255)

               aaCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCtata                                                                          >  1:5124264/1‑93 (MQ=255)

               aaCTGAATAACGCAGTCAGCATCGAACACGTGAAACCAGGAGTCCCTACAGACTGGCAAGAAACAGCAGCTGGGGCCGATACGCCGACAtata                                                                          >  1:5961633/1‑93 (MQ=255)

                aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc                                                                         >  2:2780022/1‑93 (MQ=255)

                 cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc                                                                        <  1:3882593/93‑1 (MQ=255)

                 cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc                                                                        >  1:4449569/1‑93 (MQ=255)

                  tGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCg                                                                       >  1:2938046/1‑93 (MQ=255)

                  tGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCg                                                                       >  2:653287/1‑93 (MQ=255)

                  tGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCg                                                                       >  2:3531619/1‑93 (MQ=255)

                   gAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGc                                                                      >  2:4264622/1‑93 (MQ=255)

                      tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta                                                                   <  2:742747/93‑1 (MQ=255)

                        aCGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtata                                                                 >  1:7389399/1‑93 (MQ=255)

                        aCGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtata                                                                 >  1:7783911/1‑93 (MQ=255)

                          gCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAcc                                                               >  1:1358965/1‑93 (MQ=255)

                              tCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAg                                                           <  2:6721111/93‑1 (MQ=255)

                              tCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAg                                                           >  2:4985208/1‑93 (MQ=255)

                                aGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGc                                                         >  1:7216013/1‑93 (MQ=255)

                                 gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa                                                        >  1:5762201/1‑93 (MQ=255)

                                  cATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAg                                                       <  1:4411210/93‑1 (MQ=255)

                                  cATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAg                                                       <  2:1386645/93‑1 (MQ=255)

                                   aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt                                                      >  2:644253/1‑93 (MQ=255)

                                   aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt                                                      >  1:7546334/1‑93 (MQ=255)

                                   aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt                                                      >  1:3225758/1‑93 (MQ=255)

                                    tCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTg                                                     <  1:595617/93‑1 (MQ=255)

                                     cGACAACGTGAAACCAGGAGTCACTACAGACTGAAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCCAAGGCAGTgg                                                    <  1:7016324/93‑1 (MQ=255)

                                      gACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGa                                                   >  1:4107561/1‑93 (MQ=255)

                                       aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGAc                                                  >  2:3017840/1‑93 (MQ=255)

                                        cAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACt                                                 <  2:4709591/93‑1 (MQ=255)

                                         aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGCTGGCGCCTATAAGGCGACCTATACCGCCTATACCAACGGCAGTGGACtt                                                >  1:6557212/1‑93 (MQ=255)

                                         aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACtt                                                <  1:2276011/93‑1 (MQ=255)

                                         aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACtt                                                <  1:4207949/93‑1 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACTGCCTATATCAAAGGAAGTGGACTTa                                               >  2:4076562/1‑93 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa                                               >  1:331251/1‑93 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa                                               <  2:736956/93‑1 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa                                               <  2:5939310/93‑1 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa                                               >  2:5884459/1‑93 (MQ=255)

                                            gTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACt                                             <  2:1417865/93‑1 (MQ=255)

                                            gTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACt                                             <  2:3843775/93‑1 (MQ=255)

                                             tGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTg                                            >  2:4864004/1‑93 (MQ=255)

                                             tGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTg                                            <  2:2235882/93‑1 (MQ=255)

                                             tGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTg                                            >  2:7695512/1‑93 (MQ=255)

                                              gAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGc                                           <  1:540594/93‑1 (MQ=255)

                                              gAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGc                                           <  1:6203375/93‑1 (MQ=255)

                                                 aCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGaa                                        >  1:4668820/1‑93 (MQ=255)

                                                   cAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGc                                      <  2:7157363/93‑1 (MQ=255)

                                                   cAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGc                                      >  1:6638333/1‑93 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                    >  1:5431585/1‑93 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                    <  1:5861647/93‑1 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                    >  1:3189185/1‑93 (MQ=255)

                                                      gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt                                   <  2:6126472/93‑1 (MQ=255)

                                                      gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt                                   <  1:6394442/93‑1 (MQ=255)

                                                       aGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAtt                                  <  2:1608192/93‑1 (MQ=255)

                                                        gTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTa                                 >  2:5958488/1‑93 (MQ=255)

                                                         tCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTaa                                <  1:2882226/93‑1 (MQ=255)

                                                          cACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAAt                               >  2:3786688/1‑93 (MQ=255)

                                                           aCTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATg                              >  1:2481425/1‑93 (MQ=255)

                                                            cTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGc                             <  2:11469/93‑1 (MQ=255)

                                                            cTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGc                             >  1:3971800/1‑93 (MQ=255)

                                                             tACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCa                            >  1:2625462/1‑93 (MQ=255)

                                                              aCAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCaa                           <  2:3400411/93‑1 (MQ=255)

                                                               cAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCaaa                          <  1:7918384/93‑1 (MQ=255)

                                                                aGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCaaaa                         >  1:1568472/1‑93 (MQ=255)

                                                                 gACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAAc                        <  2:5808419/93‑1 (MQ=255)

                                                                 gACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAAc                        >  1:1903346/1‑93 (MQ=255)

                                                                 gACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAAc                        >  1:1809002/1‑93 (MQ=255)

                                                                 gACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAAc                        >  1:1681001/1‑93 (MQ=255)

                                                                  aCTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACt                       <  1:4505337/93‑1 (MQ=255)

                                                                    tGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg                     >  2:6384256/1‑93 (MQ=255)

                                                                    tGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg                     >  1:5386758/1‑93 (MQ=255)

                                                                    tGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg                     >  1:2421849/1‑93 (MQ=255)

                                                                    tGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg                     >  1:1101716/1‑93 (MQ=255)

                                                                     ggAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGa                    <  2:2454629/93‑1 (MQ=255)

                                                                      gaaagaacCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGaa                   <  1:4750420/93‑1 (MQ=255)

                                                                      gaaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCCAAGGCAGTGGACTTACTGCGAGGCTATTAATCAACAACTGGaa                   >  1:5899945/1‑93 (MQ=255)

                                                                      gaaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGaa                   >  1:1295523/1‑93 (MQ=255)

                                                                       aaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAAt                  <  2:4654633/93‑1 (MQ=255)

                                                                       aaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAAt                  >  2:7665455/1‑93 (MQ=255)

                                                                        aagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg                 <  1:6779203/93‑1 (MQ=255)

                                                                         agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa                <  2:4041904/93‑1 (MQ=255)

                                                                          gaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGaa               >  2:7209910/1‑93 (MQ=255)

                                                                           aaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAg              <  2:558131/93‑1 (MQ=255)

                                                                              ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt           <  1:3510996/93‑1 (MQ=255)

                                                                               cGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt          <  1:4061073/93‑1 (MQ=255)

                                                                               cGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt          >  1:1497939/1‑93 (MQ=255)

                                                                               cGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt          <  2:822527/93‑1 (MQ=255)

                                                                                   gATGGCGCCTATAAGGCGTCCTATACCGCATATGCCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAt      <  2:7232482/93‑1 (MQ=255)

                                                                                   gATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAt      >  2:852065/1‑93 (MQ=255)

                                                                                    aTGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATa     >  1:1404237/1‑93 (MQ=255)

                                                                                     tGGCGCCTATAAGGCTACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAc    <  1:6252/93‑1 (MQ=255)

AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCG  >  NC_000913/2044959‑2045138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`