BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,072,030	T→A	C824S (TGC→AGC)	b2000 →	outer membrane fluffing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,072,030	0	T	A	100.0%	706.0 / NA	198	C824S (TGC→AGC)	b2000	outer membrane fluffing protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (95/103); total (95/103)

Only 100 of 222 total aligned reads displayed.

GCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCTGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCG  >  NC_000913/2071940‑2072119

 cgGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGcc                                                                                        <  1:4479511/93‑1 (MQ=255)

  gggggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCt                                                                                       >  2:246268/1‑93 (MQ=255)

    gggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTgg                                                                                     <  2:6897583/93‑1 (MQ=255)

     ggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGTCTggg                                                                                    >  1:5092476/1‑93 (MQ=255)

     ggTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTggg                                                                                    >  1:3932488/1‑93 (MQ=255)

       tataTGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCg                                                                                  >  1:1297370/1‑93 (MQ=255)

         tatGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGa                                                                                <  2:884406/93‑1 (MQ=255)

         tatGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGa                                                                                >  2:4035245/1‑93 (MQ=255)

         tatGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGa                                                                                <  2:4190949/93‑1 (MQ=255)

          atGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGAt                                                                               >  2:6953851/1‑93 (MQ=255)

           tGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCATGGGCGGATa                                                                              >  1:6796124/1‑93 (MQ=255)

            ggTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAc                                                                             >  1:4575562/1‑93 (MQ=255)

            ggTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAc                                                                             <  2:3813936/93‑1 (MQ=255)

             gTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAcc                                                                            <  1:4783628/93‑1 (MQ=255)

             gTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAcc                                                                            <  2:398805/93‑1 (MQ=255)

                ctgctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGa                                                                         >  2:6198860/1‑93 (MQ=255)

                  gctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAAt                                                                       >  2:5340890/1‑93 (MQ=255)

                   ctgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATc                                                                      <  1:1520066/93‑1 (MQ=255)

                    tgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCt                                                                     >  2:1003123/1‑93 (MQ=255)

                    tgGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCt                                                                     <  1:2844145/93‑1 (MQ=255)

                     ggCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTg                                                                    >  2:1912639/1‑93 (MQ=255)

                      gCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTgg                                                                   >  1:3614485/1‑93 (MQ=255)

                      gCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCAGGGATGATGACGGCAGCCTGGGCGGATACCTGAATCTgg                                                                   >  1:3693534/1‑93 (MQ=255)

                       ccATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGt                                                                  >  1:7669186/1‑93 (MQ=255)

                        cATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTa                                                                 >  2:120717/1‑93 (MQ=255)

                        cATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTa                                                                 <  1:1018428/93‑1 (MQ=255)

                         aTTCTTCCGTTGATGTTAAGGATGATGACGGCTGCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGATTCTGGTac                                                                >  2:1021793/1‑93 (MQ=255)

                         aTTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCNGNGCGGATACCTGNATCTGGGac                                                                >  1:4064017/1‑93 (MQ=255)

                          ttcttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTaca                                                               >  2:605499/1‑93 (MQ=255)

                          ttcttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTaca                                                               >  2:4683370/1‑93 (MQ=255)

                            cttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacaca                                                             >  2:1289824/1‑93 (MQ=255)

                            cttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacaca                                                             >  1:7520165/1‑93 (MQ=255)

                             ttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGGTGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacacac                                                            >  2:7384967/1‑93 (MQ=255)

                             ttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacacac                                                            <  1:2113015/93‑1 (MQ=255)

                             ttcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTacacac                                                            <  1:5405446/93‑1 (MQ=255)

                              tcCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACg                                                           <  2:5924151/93‑1 (MQ=255)

                                cGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtc                                                         <  1:6520267/93‑1 (MQ=255)

                                 gTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcc                                                        <  2:2947713/93‑1 (MQ=255)

                                 gTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcc                                                        <  2:3577741/93‑1 (MQ=255)

                                 gTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcc                                                        <  1:2456699/93‑1 (MQ=255)

                                  ttGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcct                                                       >  2:3490352/1‑93 (MQ=255)

                                  ttGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcct                                                       <  2:6741932/93‑1 (MQ=255)

                                  ttGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcct                                                       >  2:1109988/1‑93 (MQ=255)

                                  ttGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGtcct                                                       >  2:911902/1‑93 (MQ=255)

                                   tGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCGGGCAGCCTGGGGGGATACCTGAATCTTGTACACACGtcctc                                                      >  1:1141129/1‑93 (MQ=255)

                                     aTGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCg                                                    <  1:419601/93‑1 (MQ=255)

                                      tGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCgg                                                   >  1:3071159/1‑93 (MQ=255)

                                       ggtAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGc                                                  <  1:5702945/91‑1 (MQ=255)

                                       gTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGc                                                  >  1:6694354/1‑93 (MQ=255)

                                       gTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTAAACACGTCCTCCGGc                                                  >  2:3299234/1‑93 (MQ=255)

                                         tAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCt                                                <  2:23124/93‑1 (MQ=255)

                                         tAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCt                                                >  2:3686447/1‑93 (MQ=255)

                                           aagatggtGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCtgt                                              <  2:7577757/91‑1 (MQ=255)

                                           aGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGGCTGGGCGGATACCTGAATCTGGTGCACACGTCCTCCGGCCtgg                                              >  1:4048883/1‑92 (MQ=255)

                                           aGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCtgt                                              <  2:5890288/93‑1 (MQ=255)

                                             gatgctGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCAGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTgg                                            <  2:7001248/93‑1 (MQ=255)

                                             gatgatGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTgg                                            <  1:4842239/93‑1 (MQ=255)

                                             gatgatGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTgg                                            <  2:2377138/93‑1 (MQ=255)

                                              atgatgACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTggg                                           <  2:5740973/93‑1 (MQ=255)

                                                gatgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCt                                         >  2:1408775/1‑93 (MQ=255)

                                                  tgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGa                                       <  1:324608/93‑1 (MQ=255)

                                                  tgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGa                                       <  2:626151/93‑1 (MQ=255)

                                                  tgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGa                                       >  2:6781041/1‑93 (MQ=255)

                                                  tgaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGa                                       >  1:7116473/1‑93 (MQ=255)

                                                   gaCGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGAc                                      <  1:1686077/93‑1 (MQ=255)

                                                     cGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACAt                                    >  2:6470098/1‑93 (MQ=255)

                                                      ggCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACAtt                                   >  1:427630/1‑93 (MQ=255)

                                                       gCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATtg                                  >  1:6276946/1‑93 (MQ=255)

                                                         tCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCAGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATtgtg                                >  1:4896750/1‑93 (MQ=255)

                                                          cccGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTgg                               >  2:1995295/1‑93 (MQ=255)

                                                           ccGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGc                              <  2:4232818/93‑1 (MQ=255)

                                                            cGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGca                             <  1:1215695/93‑1 (MQ=255)

                                                             gTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcac                            <  1:5317261/93‑1 (MQ=255)

                                                              tGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcaca                           >  1:2576481/1‑93 (MQ=255)

                                                              tGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcaca                           >  1:735456/1‑93 (MQ=255)

                                                              tGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcaca                           <  1:616658/93‑1 (MQ=255)

                                                              tGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGcaca                           >  1:2667226/1‑93 (MQ=255)

                                                               gCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAg                          >  1:1705967/1‑93 (MQ=255)

                                                                ccGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTTAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAgg                         <  1:2307912/93‑1 (MQ=255)

                                                                ccGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAgg                         >  1:4171219/1‑93 (MQ=255)

                                                                ccGGCACGGGCCGGGATGATGCCGGCAGGCTGGGCGGATGCCTGAATCTGGTACGCACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAgg                         <  1:5947455/93‑1 (MQ=255)

                                                                 cGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAggg                        <  2:7239295/93‑1 (MQ=255)

                                                                  ggCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGa                       <  2:7905674/93‑1 (MQ=255)

                                                                   gCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGaa                      >  1:5558962/1‑93 (MQ=255)

                                                                     aCGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAAcc                    <  2:7819340/93‑1 (MQ=255)

                                                                     aCGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAAcc                    <  2:711602/93‑1 (MQ=255)

                                                                        gTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACTCACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGc                 >  2:7266322/1‑93 (MQ=255)

                                                                            gggATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCcaca             >  1:467346/1‑93 (MQ=255)

                                                                             ggATGATGCCGGCAGCGTGGGCGGATCCCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAg            <  1:6606971/93‑1 (MQ=255)

                                                                              gatgatGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGc           >  2:5401182/1‑93 (MQ=255)

                                                                               atgatgCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCa          >  1:7392344/1‑93 (MQ=255)

                                                                                tgatgCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCAt         >  2:3039407/1‑93 (MQ=255)

                                                                                tgatgCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCAt         >  1:4074982/1‑93 (MQ=255)

                                                                                tgatgCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCAt         <  2:1648869/93‑1 (MQ=255)

                                                                                tgaggCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCAt         <  2:6615311/93‑1 (MQ=255)

                                                                                   tgCCGGCAGCCGGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGACCCCGCCACAGCATGaa      <  1:3382710/93‑1 (MQ=255)

                                                                                     ccGGCGGCCCCGTCGGCTCCCTGATTCAGGTACACACGCCGCCCGCCGTGGGGGGGCCCGTTGTGACACAGCGACCCCGCCACAGCATGAAAg    <  2:217669/93‑1 (MQ=255)

                                                                                     ccGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAg    <  1:5811302/93‑1 (MQ=255)

                                                                                      gggCAGCCTGGGCGGATACCTGAATCTGGTCCACACGCCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGAAACCCGCCACAGCATGAAAGc   <  2:1720082/92‑1 (MQ=255)

                                                                                       ggCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCg  >  1:1784116/1‑93 (MQ=255)

GCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCTGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCG  >  NC_000913/2071940‑2072119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`