BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	200,585	A→G	Q35R (CAG→CGG)	hlpA →	histone‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	200,585	0	A	G	99.6%	859.1 / ‑5.4	274	Q35R (CAG→CGG)	hlpA	histone‑like protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (139/134); total (139/135)
Fisher's exact test for biased strand distribution p-value = 4.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01

Only 100 of 283 total aligned reads displayed.

TATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGC  >  NC_000913/200495‑200674

tattaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCggg                                                                                         <  2:1796287/93‑1 (MQ=255)

 attaGCTGCAGTCCGCAGTTTAGGACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGt                                                                                        <  2:4311149/93‑1 (MQ=255)

  ttaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTa                                                                                       <  1:7173674/93‑1 (MQ=255)

  ttaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTa                                                                                       <  1:5799843/93‑1 (MQ=255)

    aGCTGCAGGTCTCGGTTTAGCGCTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAgc                                                                                     <  1:5196516/93‑1 (MQ=255)

     gCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgcg                                                                                    >  1:7718541/1‑93 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  <  2:7400802/93‑1 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  >  2:2533810/1‑93 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  >  2:7066795/1‑93 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  >  2:2353839/1‑93 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  >  2:59809/1‑93 (MQ=255)

          aGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaa                                                                               >  2:6985774/1‑93 (MQ=255)

          aGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaa                                                                               >  1:3520366/1‑93 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             >  1:4977920/1‑93 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGACAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             >  2:4942688/1‑93 (MQ=255)

             tctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAc                                                                            <  1:3601832/93‑1 (MQ=255)

             gctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAc                                                                            <  1:2328851/92‑1 (MQ=255)

              ctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAcc                                                                           >  1:3185387/1‑93 (MQ=255)

              ctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAcc                                                                           <  1:6374525/93‑1 (MQ=255)

                 ggTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCggg                                                                        >  1:2282690/1‑92 (MQ=255)

                 ggTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgt                                                                        <  2:3249984/93‑1 (MQ=255)

                 ggTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgt                                                                        >  2:4227797/1‑93 (MQ=255)

                  gTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGAAGCGCAGAAAACCggg                                                                        >  1:7780196/1‑92 (MQ=255)

                  gTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtg                                                                       >  2:5647120/1‑93 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTc                                                                   <  1:2976501/93‑1 (MQ=255)

                         aCTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTaa                                                                >  2:2072183/1‑93 (MQ=255)

                         aCTGACAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTaa                                                                <  2:3134935/93‑1 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAaca                                                              <  2:1954101/93‑1 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAaca                                                              >  1:3064016/1‑93 (MQ=255)

                            ggCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAacac                                                             >  2:3343464/1‑93 (MQ=255)

                               aaCTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCt                                                          >  1:2124705/1‑93 (MQ=255)

                                aCTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTg                                                         >  1:98845/1‑93 (MQ=255)

                                aCTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTg                                                         >  2:7101271/1‑93 (MQ=255)

                                aCTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTg                                                         >  1:6240778/1‑93 (MQ=255)

                                 cTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTgg                                                        >  1:2012/1‑93 (MQ=255)

                                 cTTCTCCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTgg                                                        <  1:4641381/93‑1 (MQ=255)

                                   tCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaa                                                      >  2:4389821/1‑93 (MQ=255)

                                     tGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaaaa                                                    >  2:5831317/1‑93 (MQ=255)

                                     tGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaaaa                                                    >  1:1094725/1‑93 (MQ=255)

                                       cTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATg                                                  >  1:7491048/1‑93 (MQ=255)

                                        tCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGa                                                 <  1:3963417/93‑1 (MQ=255)

                                        gcAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGa                                                 <  1:261340/92‑1 (MQ=255)

                                          aGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGt                                               >  1:7382315/1‑93 (MQ=255)

                                           ggcggcTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              >  1:4105747/1‑93 (MQ=255)

                                           ggcggcTGAC‑AAAATTGCAATCGTCAACATGGGAAGCCTGTTCCAGCGGGTAGGGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATAAGtt                                              >  1:6462374/1‑93 (MQ=255)

                                           ggcggcTGAC‑AAAATTGCAATCGTCAACAGGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              <  1:1797562/93‑1 (MQ=255)

                                            gcggcTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTc                                             <  1:6120069/93‑1 (MQ=255)

                                             cggcTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCa                                            <  2:4828770/93‑1 (MQ=255)

                                              ggcTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaa                                           >  1:4458493/1‑93 (MQ=255)

                                               gcTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          <  1:2392811/93‑1 (MQ=255)

                                               gcTGAC‑AAAATTGCAATCGTCAACACGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          >  2:3734279/1‑93 (MQ=255)

                                                cTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAg                                         <  1:5762419/93‑1 (MQ=255)

                                                cTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAg                                         <  1:864680/93‑1 (MQ=255)

                                                cTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAg                                         <  2:7716438/93‑1 (MQ=255)

                                                  gAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGc                                       >  1:1633882/1‑93 (MQ=255)

                                                  gAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGc                                       <  1:5837995/93‑1 (MQ=255)

                                                   aC‑AAAGTTGCAATCGTCAACATGGGCAGCCTGTTACAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGcc                                      >  2:5403785/1‑93 (MQ=255)

                                                   aC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGcc                                      <  1:4745052/93‑1 (MQ=255)

                                                    c‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAACGGTGTTTCTAGCACGCTGGAAAATGAGGTCAAAGGCCg                                     >  1:4199073/1‑93 (MQ=255)

                                                      aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGt                                    <  2:4199619/93‑1 (MQ=255)

                                                      aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGt                                    <  2:5205239/93‑1 (MQ=255)

                                                        aaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGc                                  >  2:1577393/1‑93 (MQ=255)

                                                         aTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGcc                                 >  1:6929090/1‑93 (MQ=255)

                                                               aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           <  2:498701/93‑1 (MQ=255)

                                                                tCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGGGCAGAAAACCGGTGGTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAAc                          >  2:970639/1‑93 (MQ=255)

                                                                tCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGTGAAc                          >  2:6482336/1‑93 (MQ=255)

                                                                tCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAAc                          <  2:3424114/93‑1 (MQ=255)

                                                                tCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAAc                          >  1:5927174/1‑93 (MQ=255)

                                                                tCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAAc                          >  1:6856048/1‑93 (MQ=255)

                                                                 cGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACt                         <  2:2970400/93‑1 (MQ=255)

                                                                 cGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACt                         >  1:5479256/1‑93 (MQ=255)

                                                                  gTCAACATGGGCAGCCTGTTCCAGCGGGTAGGGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTg                        >  2:7436956/1‑93 (MQ=255)

                                                                   tCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGc                       <  2:2757328/93‑1 (MQ=255)

                                                                   tCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGc                       <  1:1294203/93‑1 (MQ=255)

                                                                   tCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGc                       <  2:3538130/93‑1 (MQ=255)

                                                                   tCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGc                       >  2:1753069/1‑93 (MQ=255)

                                                                   tCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGc                       >  2:1545926/1‑93 (MQ=255)

                                                                    cAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCa                      >  1:6987945/1‑93 (MQ=255)

                                                                     aaCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAg                     <  2:4478435/93‑1 (MQ=255)

                                                                     aaCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAg                     <  1:3833273/93‑1 (MQ=255)

                                                                      aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGc                    >  1:1708153/1‑93 (MQ=255)

                                                                      aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGc                    >  1:6773123/1‑93 (MQ=255)

                                                                      aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCCAACTGCAGc                    >  2:1048756/1‑93 (MQ=255)

                                                                          gggCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCAt                <  2:1655535/93‑1 (MQ=255)

                                                                           ggCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATg               <  2:5873626/93‑1 (MQ=255)

                                                                            gCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATgg              <  2:6237076/93‑1 (MQ=255)

                                                                             cAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGa             >  1:7929915/1‑93 (MQ=255)

                                                                               gCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGaaa           >  2:1265851/1‑93 (MQ=255)

                                                                               gCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGaaa           >  1:4835825/1‑93 (MQ=255)

                                                                                 cTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAcc         <  2:7329337/93‑1 (MQ=255)

                                                                                 cTGTTCCAGCGGGTAGCGCAGAAAACCGGGGTTTCTAACACGCTGGAAAATGAGGTCAAAGGCCGTGCCAGCGACCTCCAGCGCATGGAAAcc         >  2:5719253/1‑93 (MQ=255)

                                                                                  tGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCg        >  1:7096831/1‑93 (MQ=255)

                                                                                  tGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCg        >  2:2132041/1‑93 (MQ=255)

                                                                                  tGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCg        >  2:6077998/1‑93 (MQ=255)

                                                                                    ttCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGAt      >  2:7640798/1‑93 (MQ=255)

                                                                                     tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATc     <  2:6870957/93‑1 (MQ=255)

                                                                                      ccAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATCt    >  1:3878109/1‑93 (MQ=255)

                                                                                      ccAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATCt    >  2:820023/1‑93 (MQ=255)

                                                                                      ccAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATCt    <  1:1081786/93‑1 (MQ=255)

                                                                                        agcggGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATCTGc  <  2:7860877/93‑1 (MQ=255)

TATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGAC‑AAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGC  >  NC_000913/200495‑200674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`