BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,106,978	A→G	V210A (GTG→GCG)	rfbX ←	putative O‑antigen transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,106,978	0	A	G	100.0%	843.1 / NA	263	V210A (GTG→GCG)	rfbX	putative O‑antigen transporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (142/121); total (142/121)

Only 100 of 273 total aligned reads displayed.

AATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGTCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACTT  >  NC_000913/2106888‑2107067

   cccAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTa                                                                                      <  2:4239138/93‑1 (MQ=255)

    ccAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTAt                                                                                     <  2:813836/93‑1 (MQ=255)

    ccAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTAt                                                                                     <  1:2152350/93‑1 (MQ=255)

     cAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATg                                                                                    <  2:1627426/93‑1 (MQ=255)

      aGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATga                                                                                   >  1:4853353/1‑92 (MQ=255)

      aGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGt                                                                                   >  2:7289671/1‑93 (MQ=255)

        gATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTaa                                                                                 <  1:3849195/93‑1 (MQ=255)

        gATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTaa                                                                                 <  2:7887417/93‑1 (MQ=255)

         ataataACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAAt                                                                                <  2:6857386/93‑1 (MQ=255)

         ataataACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAAt                                                                                <  1:6963232/93‑1 (MQ=255)

          taataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATg                                                                               <  1:2961927/93‑1 (MQ=255)

          taataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATg                                                                               >  1:6774028/1‑93 (MQ=255)

          taataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATg                                                                               >  2:2572294/1‑93 (MQ=255)

           aataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGa                                                                              >  2:7481443/1‑93 (MQ=255)

            ataaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGAt                                                                             >  1:4658678/1‑93 (MQ=255)

             taaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATa                                                                            <  2:1344260/93‑1 (MQ=255)

             taaCTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATa                                                                            <  1:67060/93‑1 (MQ=255)

                 tATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTACAGATCGACGCGCATTATGTAATGATAGCGt                                                                        >  1:4153115/1‑93 (MQ=255)

                 tATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCATGCTAAAGATCGACGCGCATTATGTAATGATAGCga                                                                        >  2:2761808/1‑92 (MQ=255)

                    tCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAATCCGCCTGCTCAAGATCGACGCGCATTATGTAATGATAGCGTaat                                                                     >  2:6025575/1‑92 (MQ=255)

                       cGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACttt                                                                  >  1:5170270/1‑93 (MQ=255)

                          aGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTAcc                                                               <  2:1283841/93‑1 (MQ=255)

                          aGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTAcc                                                               <  1:6343484/93‑1 (MQ=255)

                           gAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCa                                                              >  1:5440029/1‑93 (MQ=255)

                            aaTATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCaa                                                             <  2:3016435/93‑1 (MQ=255)

                            aaTATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCaa                                                             <  1:6216311/93‑1 (MQ=255)

                             atatAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAAt                                                            <  2:6926573/93‑1 (MQ=255)

                              tataAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATc                                                           >  2:5708333/1‑93 (MQ=255)

                              tataAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATc                                                           >  2:3569768/1‑93 (MQ=255)

                               ataAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATcc                                                          >  2:7639236/1‑93 (MQ=255)

                                taAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCa                                                         >  2:4417747/1‑93 (MQ=255)

                                  aaCTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAAc                                                       <  1:1075307/93‑1 (MQ=255)

                                  aaCTAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAAc                                                       >  1:6322665/1‑93 (MQ=255)

                                     tAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCtt                                                    >  2:4739094/1‑93 (MQ=255)

                                     tAATAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCtt                                                    >  2:6414421/1‑93 (MQ=255)

                                      aaTAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTc                                                   <  2:1029989/93‑1 (MQ=255)

                                       aTAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCa                                                  >  1:6170619/1‑93 (MQ=255)

                                        tAGCAGATGTGGAAATAAAAACATGAAACCCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCAt                                                 <  1:4935789/93‑1 (MQ=255)

                                        tAGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCAt                                                 <  1:4048030/93‑1 (MQ=255)

                                         aGCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATg                                                >  2:5381734/1‑93 (MQ=255)

                                          gCAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGa                                               <  2:7618636/93‑1 (MQ=255)

                                           cAGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaa                                              <  2:3895124/93‑1 (MQ=255)

                                            aGATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaac                                             >  2:7738419/1‑93 (MQ=255)

                                             gATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaaca                                            >  2:5929772/1‑93 (MQ=255)

                                             gATGTGGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaaca                                            >  1:146354/1‑93 (MQ=255)

                                               tgtgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaacaac                                          <  2:708744/93‑1 (MQ=255)

                                               tgtgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaacaac                                          >  2:6687941/1‑93 (MQ=255)

                                               tgtgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaacaac                                          <  1:7233783/93‑1 (MQ=255)

                                               tgtgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGaacaac                                          >  1:4308248/1‑93 (MQ=255)

                                                gtgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACg                                         <  1:2342414/93‑1 (MQ=255)

                                                 tgGAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGa                                        >  1:3389956/1‑93 (MQ=255)

                                                   gAAATAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATa                                      >  1:2767489/1‑93 (MQ=255)

                                                      aTAAAAACATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCt                                   <  1:4004346/93‑1 (MQ=255)

                                                        aaaaaCATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAg                                 >  1:2742008/1‑93 (MQ=255)

                                                         aaaaCATGAAAACCGCCTACTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGt                                >  2:6123475/1‑93 (MQ=255)

                                                          aaaCATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTg                               <  2:1924945/93‑1 (MQ=255)

                                                           aaCATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGc                              >  2:6803098/1‑93 (MQ=255)

                                                            aCATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCa                             >  1:5855411/1‑93 (MQ=255)

                                                             cATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaa                            <  2:4140386/93‑1 (MQ=255)

                                                             cATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaa                            >  1:4530909/1‑93 (MQ=255)

                                                             cATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaa                            >  1:4245248/1‑93 (MQ=255)

                                                             cATGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaa                            >  2:1722637/1‑93 (MQ=255)

                                                               tGAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaata                          <  1:3225955/93‑1 (MQ=255)

                                                                gAAAACCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaataa                         >  2:1015852/1‑93 (MQ=255)

                                                                 aaaaCCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaataat                        <  1:1211523/93‑1 (MQ=255)

                                                                 aaaaCCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCaataat                        <  2:4582878/93‑1 (MQ=255)

                                                                   aaCCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTc                      <  1:7575852/93‑1 (MQ=255)

                                                                    aCCGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTcc                     >  1:256271/1‑93 (MQ=255)

                                                                     ccGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCa                    >  1:224156/1‑93 (MQ=255)

                                                                     ccGCCTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCa                    <  2:2045116/93‑1 (MQ=255)

                                                                       gccTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACAAATCAAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGc                  <  2:655298/91‑1 (MQ=255)

                                                                         cTGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCaa                <  2:5436730/93‑1 (MQ=255)

                                                                          tGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAAc               >  1:1627366/1‑93 (MQ=255)

                                                                          tGCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAAc               >  1:6083481/1‑93 (MQ=255)

                                                                           gCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAAcc              <  1:6112150/93‑1 (MQ=255)

                                                                           gCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAAcc              >  2:7683/1‑93 (MQ=255)

                                                                           gCTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAAcc              <  2:5061425/93‑1 (MQ=255)

                                                                            cTAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCa             >  2:2952487/1‑93 (MQ=255)

                                                                             tAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCat            >  1:780823/1‑92 (MQ=255)

                                                                             tAAAGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAg            <  2:3256826/93‑1 (MQ=255)

                                                                              aaaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGa           >  2:5919707/1‑93 (MQ=255)

                                                                              aaaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGa           >  1:5550623/1‑93 (MQ=255)

                                                                              aaaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGa           >  2:179748/1‑93 (MQ=255)

                                                                              aaaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGa           >  1:813305/1‑93 (MQ=255)

                                                                               aaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAt          >  1:7861030/1‑93 (MQ=255)

                                                                               aaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAt          >  2:474619/1‑93 (MQ=255)

                                                                               aaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAt          <  2:4658677/93‑1 (MQ=255)

                                                                               aaGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAt          >  1:4776268/1‑93 (MQ=255)

                                                                                aGATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAtt         <  2:4424152/93‑1 (MQ=255)

                                                                                 gATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAttt        <  2:2225234/93‑1 (MQ=255)

                                                                                 gATCGACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGAttt        <  2:1331971/93‑1 (MQ=255)

                                                                                     gACGCGCATTATGTAATGATAGCGTATCTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCAc    <  2:3842861/93‑1 (MQ=255)

                                                                                     gACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCAc    <  1:4411839/93‑1 (MQ=255)

                                                                                     gACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCAc    >  2:2555011/1‑93 (MQ=255)

                                                                                     gACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCAc    <  1:1608260/93‑1 (MQ=255)

                                                                                     gACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCAc    >  1:1892809/1‑93 (MQ=255)

                                                                                     gACGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCAc    <  1:6492168/93‑1 (MQ=255)

                                                                                      aCGCGCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACt   <  2:5818178/93‑1 (MQ=255)

                                                                                       cgcgCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACtt  >  1:4375208/1‑93 (MQ=255)

                                                                                       cgcgCATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACtt  >  1:2016658/1‑93 (MQ=255)

AATCCCAGGATAATAACTATTCCCGTAGAATATAAACTAATAGCAGATGTGGAAATAAAAACATGAAAACCGTCTGCTAAAGATCGACGCACATTATGTAATGATAGCGTAACTTTACCAATCCAACCTTCATGAACAACGATAGCTAGTGCAATAATTCCAGCAACCAGATTTGCACTT  >  NC_000913/2106888‑2107067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`