BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,113,625	T→C	L98L (TTA→TTG)	wcaM ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,113,625	0	T	C	99.6%	787.9 / ‑5.0	248	L98L (TTA→TTG)	wcaM	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (132/114); total (133/115)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.91e-01

Only 100 of 256 total aligned reads displayed.

CCCTTTGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGTAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATT  >  NC_000913/2113535‑2113714

 ccTTTGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAg                                                                                        >  1:4270691/1‑93 (MQ=255)

  cTTTGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCGCCTGGCTGCCGTCCTGCAAGa                                                                                       <  1:7735484/93‑1 (MQ=255)

  cTTTGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGa                                                                                       <  1:6337438/93‑1 (MQ=255)

  cTTTGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGa                                                                                       >  2:5609438/1‑93 (MQ=255)

   tttGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCGCCTGGCTGCCGTCCTGCAAgcc                                                                                      >  1:7817871/1‑91 (MQ=255)

    ttGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGTAAGACa                                                                                     <  2:6896908/93‑1 (MQ=255)

      gATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACaaa                                                                                   >  1:4828245/1‑93 (MQ=255)

      gATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACaaa                                                                                   <  2:2161424/93‑1 (MQ=255)

        tGGTGCATTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATc                                                                                 <  1:2638255/93‑1 (MQ=255)

         ggTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCg                                                                                >  2:6769334/1‑93 (MQ=255)

           tGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGcc                                                                              >  2:2529209/1‑93 (MQ=255)

             cAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCct                                                                            <  1:7347199/93‑1 (MQ=255)

              cgTCAGACGCACGCACCTCCAGGGTGAGGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCctc                                                                           <  1:1536771/92‑1 (MQ=255)

               gTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCctct                                                                          >  2:5557786/1‑93 (MQ=255)

               gTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCctct                                                                          >  2:1896817/1‑93 (MQ=255)

               gTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCctct                                                                          >  2:1979640/1‑93 (MQ=255)

               gTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCctct                                                                          >  1:1369448/1‑93 (MQ=255)

                 cAGAACCACGCGCATCCAGGGTGATGTTATGCATACTGACGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAGATCGCCCTCTGc                                                                        <  2:7036996/93‑1 (MQ=255)

                  aGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGcc                                                                       <  2:727088/93‑1 (MQ=255)

                    aaCCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGt                                                                     >  2:5903401/1‑93 (MQ=255)

                     aCCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGtt                                                                    >  2:5023664/1‑93 (MQ=255)

                      ccACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTg                                                                   >  2:5959464/1‑93 (MQ=255)

                       cACCCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGc                                                                  <  1:6849791/93‑1 (MQ=255)

                        aCGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGcc                                                                 >  1:3204254/1‑93 (MQ=255)

                          gCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCcgc                                                               >  2:3599695/1‑93 (MQ=255)

                            acaTCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCgcgc                                                             >  2:1655071/1‑93 (MQ=255)

                            acaTCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCgcgc                                                             >  2:3926813/1‑93 (MQ=255)

                               tCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAg                                                          >  1:5843264/1‑93 (MQ=255)

                               tCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAg                                                          >  2:2628098/1‑93 (MQ=255)

                               tCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAg                                                          >  1:6076161/1‑93 (MQ=255)

                               tCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAg                                                          >  2:1173143/1‑93 (MQ=255)

                                ccAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGc                                                         <  2:1824739/93‑1 (MQ=255)

                                  aGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCtt                                                       >  2:5455063/1‑93 (MQ=255)

                                     gTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCa                                                    >  2:3520866/1‑93 (MQ=255)

                                      ttaTGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCaa                                                   <  1:4672406/91‑1 (MQ=255)

                                      tGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCaa                                                   >  2:6163292/1‑93 (MQ=255)

                                      tGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCaa                                                   >  1:3422791/1‑93 (MQ=255)

                                       gATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAg                                                  <  2:506117/93‑1 (MQ=255)

                                       gATGTTATGCATACTGCCGCCATCCTCCCCGGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAg                                                  <  1:2091095/93‑1 (MQ=255)

                                         tGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGaa                                                >  1:5818176/1‑93 (MQ=255)

                                         tGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGaa                                                <  2:1005992/93‑1 (MQ=255)

                                           ttATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAAtg                                              >  2:1507062/1‑93 (MQ=255)

                                            tATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAAtgt                                             <  2:665517/93‑1 (MQ=255)

                                            tATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAAtgt                                             <  2:2966464/93‑1 (MQ=255)

                                            tATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAAtgt                                             <  1:1030991/93‑1 (MQ=255)

                                             aTGCATACTGCCGACAACCTCCCCTGTCGCCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGAGCAAGCTTACAAGAAtgag                                            <  1:7024877/93‑3 (MQ=255)

                                              tGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATgtgt                                           <  2:2793824/93‑1 (MQ=255)

                                                cATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTaa                                         <  2:3084332/93‑1 (MQ=255)

                                                cATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTaa                                         <  1:7528623/93‑1 (MQ=255)

                                                cATACCGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTaa                                         <  1:1905180/93‑1 (MQ=255)

                                                 aTACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAAc                                        >  2:6552923/1‑93 (MQ=255)

                                                 aTACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAAc                                        <  2:3713858/93‑1 (MQ=255)

                                                 aTACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAAc                                        <  1:4080127/93‑1 (MQ=255)

                                                 aTACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAAc                                        <  2:5693191/93‑1 (MQ=255)

                                                  tACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACg                                       <  2:1259427/93‑1 (MQ=255)

                                                    cTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGtt                                     <  2:4497812/93‑1 (MQ=255)

                                                    cTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGtt                                     <  1:4405392/93‑1 (MQ=255)

                                                     tGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGttt                                    >  1:6124426/1‑93 (MQ=255)

                                                      gccgccATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGtttt                                   >  1:2544284/1‑93 (MQ=255)

                                                       ccgccATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTa                                  <  2:4677864/93‑1 (MQ=255)

                                                       ccgccATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTa                                  >  1:5576885/1‑93 (MQ=255)

                                                        cgccATCCTCCCCTGTCCCCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTAc                                 <  2:6370609/93‑1 (MQ=255)

                                                        cgccATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTAc                                 <  2:3309202/93‑1 (MQ=255)

                                                         gccATCCTCCCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTAcc                                >  1:1714379/1‑93 (MQ=255)

                                                             tcctccCCTGTCACCTGGCTGCCGTCCTGCAAGACCAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTCCCggga                            >  1:3257642/1‑93 (MQ=255)

                                                             tcctccCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCggga                            >  1:1295714/1‑93 (MQ=255)

                                                             gcctccCCTGTCACCTCGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCTTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCggga                            <  1:4454587/92‑1 (MQ=255)

                                                               ctccCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCgggagg                          <  1:2161556/93‑1 (MQ=255)

                                                               ctccCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCgggagg                          >  1:5355755/1‑93 (MQ=255)

                                                                tccCCTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCgggaggg                         >  1:5608723/1‑93 (MQ=255)

                                                                 ccccTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCgggagggc                        >  1:3076204/1‑92 (MQ=255)

                                                                  cccTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGAt                       <  1:5966664/93‑1 (MQ=255)

                                                                   ccTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATa                      >  2:2253686/1‑93 (MQ=255)

                                                                   ccTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGCAACGTTTTACCGGGAGGGATa                      <  2:4642389/93‑1 (MQ=255)

                                                                    cTGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATaa                     >  1:2790985/1‑93 (MQ=255)

                                                                     tGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATaaa                    <  1:6176168/93‑1 (MQ=255)

                                                                     tGTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATaaa                    >  1:4941447/1‑93 (MQ=255)

                                                                     cgTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATaaa                    <  1:6647406/92‑1 (MQ=255)

                                                                      gTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAg                   >  1:5418096/1‑93 (MQ=255)

                                                                      gTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAg                   <  2:528593/93‑1 (MQ=255)

                                                                      gTCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAg                   >  1:61714/1‑93 (MQ=255)

                                                                       tCACCTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGa                  <  2:7687337/93‑1 (MQ=255)

                                                                         cccTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATg                <  2:6266555/92‑1 (MQ=255)

                                                                          ccTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGc               <  1:951282/93‑1 (MQ=255)

                                                                          ccTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGc               >  1:2200673/1‑93 (MQ=255)

                                                                          ccTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGc               >  2:2871159/1‑93 (MQ=255)

                                                                           cTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGcc              <  2:7710638/93‑1 (MQ=255)

                                                                           cTGGCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGcc              <  1:1665351/93‑1 (MQ=255)

                                                                             ggCTGCCGTCCTGGAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCgg            >  1:5226126/1‑93 (MQ=255)

                                                                             ggCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCgg            >  2:7205260/1‑93 (MQ=255)

                                                                              gCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGgt           >  2:7887462/1‑93 (MQ=255)

                                                                              gCTGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGgt           <  1:6564403/93‑1 (MQ=255)

                                                                                tGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGgtgt         <  1:7481594/93‑1 (MQ=255)

                                                                                tGCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGgtgt         >  1:3815545/1‑93 (MQ=255)

                                                                                 gCCGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGtt        <  1:87354/93‑1 (MQ=255)

                                                                                   cGTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGa      <  1:7272659/93‑1 (MQ=255)

                                                                                    gTCCTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGat     >  1:7704969/1‑93 (MQ=255)

                                                                                      ccTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGatat   <  2:601608/93‑1 (MQ=255)

                                                                                      ccTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGatat   >  2:1615484/1‑93 (MQ=255)

                                                                                      ccTGCAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGatat   <  1:1339966/93‑1 (MQ=255)

CCCTTTGATGGTGCAGTCAGAACCACGCACATCCAGGGTGATGTTATGCATACTGCCGCCATCCTCCCCTGTCACCTGGCTGCCGTCCTGTAAGACAAATCGCCCTCTGCCGTTGCCGCGCAAGCTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATT  >  NC_000913/2113535‑2113714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`