Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 230,556 A→G M109T (ATG→ACG)  yafC ← putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913230,5560AG99.6% 817.0 / NA 258M109T (ATG→ACG) yafCputative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (137/120);  minor base C (0/1);  total (137/121)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 263 total aligned reads displayed.

TTTCTTTCGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCATCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGATTCTGCC  >  NC_000913/230466‑230645
                                                                                          |                                                                                         
tttctttcGATCAAATTAATAATCGTTTCGGAGGAGACTATCGACAAAGTGACTTCCGGATAGCGTTCACTGACATGCTTACTTAACGGCGTc                                                                                         >  2:2197659/1‑93 (MQ=255)
tttctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTc                                                                                         >  2:81529/1‑93 (MQ=255)
tttctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTc                                                                                         >  1:2733826/1‑93 (MQ=255)
 ttctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCa                                                                                        >  1:3708293/1‑93 (MQ=255)
 ttctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCa                                                                                        <  1:2558827/93‑1 (MQ=255)
   ctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGa                                                                                      >  1:7074123/1‑93 (MQ=255)
   ctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGa                                                                                      >  1:6086053/1‑93 (MQ=255)
   ctttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGa                                                                                      <  1:397715/93‑1 (MQ=255)
    tttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGaa                                                                                     >  1:7776316/1‑93 (MQ=255)
     ttcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGaaa                                                                                    <  1:6359146/93‑1 (MQ=255)
      tcGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGATTAATTAACGGCGTCAGAAAg                                                                                   >  2:3874821/1‑93 (MQ=255)
        gATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTg                                                                                 >  2:5826910/1‑93 (MQ=255)
         gacAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgc                                                                                <  2:1395021/91‑1 (MQ=255)
          tCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgca                                                                               >  2:4826796/1‑93 (MQ=255)
          tCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgca                                                                               >  2:2251972/1‑93 (MQ=255)
          tCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgca                                                                               <  2:3610133/93‑1 (MQ=255)
          tCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgca                                                                               <  2:2948454/93‑1 (MQ=255)
           cAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgcag                                                                              >  2:6563793/1‑93 (MQ=255)
             aaTTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTgcagca                                                                            <  1:1343677/93‑1 (MQ=255)
              aTTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGcac                                                                           >  1:4918714/1‑93 (MQ=255)
               ttAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGcacc                                                                          >  1:7824308/1‑93 (MQ=255)
               ttAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGcacc                                                                          >  1:5693234/1‑93 (MQ=255)
                taataaTCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGcacca                                                                         >  2:7474220/1‑93 (MQ=255)
                 aataagCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGcaccac                                                                        <  1:2058558/93‑1 (MQ=255)
                  ataatCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACt                                                                       >  2:3887394/1‑93 (MQ=255)
                   taatCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTg                                                                      <  2:7151027/93‑1 (MQ=255)
                   taatCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTg                                                                      <  1:2974366/93‑1 (MQ=255)
                   taatCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGATTAATTAACGGCGTCAGAAAGTGCAGAACCACTg                                                                      >  2:6380611/1‑93 (MQ=255)
                    aatCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTgg                                                                     <  2:5618710/93‑1 (MQ=255)
                       cGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGt                                                                  <  2:3506711/93‑1 (MQ=255)
                        gTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCGCCACTGGAGtt                                                                 >  1:2157610/1‑93 (MQ=255)
                        gTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGtt                                                                 <  2:7662828/93‑1 (MQ=255)
                         tttCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTg                                                                >  1:3319691/1‑93 (MQ=255)
                          ttCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTgg                                                               >  2:1490491/1‑92 (MQ=255)
                          ttCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGc                                                               <  2:5461358/93‑1 (MQ=255)
                           tCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCg                                                              >  1:3608471/1‑93 (MQ=255)
                            cGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCgg                                                             <  1:5833676/93‑1 (MQ=255)
                             ggaggaGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGc                                                            >  1:4244682/1‑93 (MQ=255)
                             ggaggaGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGc                                                            >  2:7072086/1‑93 (MQ=255)
                              gaggagACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCa                                                           >  1:1434233/1‑93 (MQ=255)
                              gaggagACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCa                                                           <  2:3468673/93‑1 (MQ=255)
                               aggagACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCAt                                                          <  2:3198144/93‑1 (MQ=255)
                               aggagACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCAt                                                          <  1:4727678/93‑1 (MQ=255)
                                ggagACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATc                                                         <  2:5945503/93‑1 (MQ=255)
                                   gaCTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGAt                                                      <  1:4586973/93‑1 (MQ=255)
                                    aCTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATc                                                     <  1:1938865/93‑1 (MQ=255)
                                         cGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTaa                                                <  1:998628/93‑1 (MQ=255)
                                         cGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTaa                                                <  1:1155851/93‑1 (MQ=255)
                                          gACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAAc                                               >  2:438874/1‑93 (MQ=255)
                                           aCAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACa                                              >  1:6175127/1‑93 (MQ=255)
                                           aCAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACa                                              <  1:6646543/93‑1 (MQ=255)
                                           aCAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGAGGCATCGATCCGTAACa                                              >  1:5252060/1‑93 (MQ=255)
                                             aaaGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGt                                            >  1:7395363/1‑93 (MQ=255)
                                             aaaGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGt                                            <  1:4605988/93‑1 (MQ=255)
                                             aaaGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGt                                            <  1:1751534/93‑1 (MQ=255)
                                                 tGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCAc                                        <  2:5387563/93‑1 (MQ=255)
                                                  gACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCAcg                                       <  1:873265/93‑1 (MQ=255)
                                                   aCTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCAcgc                                      <  1:7508821/93‑1 (MQ=255)
                                                    cTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCAcgcg                                     >  2:6490021/1‑93 (MQ=255)
                                                    cTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCAcgcg                                     >  1:3492645/1‑93 (MQ=255)
                                                    cTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCAcgcg                                     >  2:6368857/1‑93 (MQ=255)
                                                      tCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGgt                                   <  2:5158263/93‑1 (MQ=255)
                                                       ccGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGgtg                                  <  2:6352512/93‑1 (MQ=255)
                                                        cGGATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGgtgt                                 <  2:7721573/93‑1 (MQ=255)
                                                         ggATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGATTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTa                                <  2:3325519/93‑1 (MQ=255)
                                                          gATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTAt                               >  2:24504/1‑93 (MQ=255)
                                                          gATAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTAt                               >  2:1567559/1‑93 (MQ=255)
                                                           aTAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTAtt                              <  1:7245262/93‑1 (MQ=255)
                                                            tAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTa                             <  2:72194/93‑1 (MQ=255)
                                                            tAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTa                             >  2:1529938/1‑93 (MQ=255)
                                                            tAGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTa                             >  2:5051660/1‑93 (MQ=255)
                                                            tAGCGTTCACGGAAAGGCTTAATTAACGGCCTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTa                             <  1:1207652/93‑1 (MQ=255)
                                                            gaGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTa                             <  1:5206954/92‑1 (MQ=255)
                                                             aGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTAc                            <  1:7841963/93‑1 (MQ=255)
                                                             aGCGTTCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTAc                            >  1:5626043/1‑93 (MQ=255)
                                                                 ttCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGt                        >  2:5357572/1‑93 (MQ=255)
                                                                 ttCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGt                        >  2:2738158/1‑93 (MQ=255)
                                                                 ttCACGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTACGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGt                        >  2:6087859/1‑93 (MQ=255)
                                                                    aCGGAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGtctc                     >  1:5510309/1‑93 (MQ=255)
                                                                      ggAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCa                   >  2:3074014/1‑93 (MQ=255)
                                                                      ggAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCa                   >  2:3003657/1‑93 (MQ=255)
                                                                       gAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCAt                  >  1:6011330/1‑93 (MQ=255)
                                                                       gAAAGGCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCAt                  <  1:6929520/93‑1 (MQ=255)
                                                                           ggCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAAtt              >  1:5080341/1‑93 (MQ=255)
                                                                           ggCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAAtt              <  2:3380667/93‑1 (MQ=255)
                                                                           ggCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAAtt              >  1:1625659/1‑93 (MQ=255)
                                                                           ggCTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAAtt              >  2:6884557/1‑93 (MQ=255)
                                                                            gCTAAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAAttt             <  1:6444131/93‑1 (MQ=255)
                                                                             cTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTc            >  2:479512/1‑93 (MQ=255)
                                                                             cTTAATTAACGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTc            >  1:2309023/1‑93 (MQ=255)
                                                                              ttaattaaCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCt           >  1:2825399/1‑93 (MQ=255)
                                                                              ttaattaaCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCt           <  1:3854693/93‑1 (MQ=255)
                                                                               taattaaCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTg          <  2:6870785/93‑1 (MQ=255)
                                                                                aattaaCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGGGTATTACGCGTCTCCATAATTTCTGa         <  2:2554229/93‑1 (MQ=255)
                                                                                  ttaaCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGAtt       >  1:1513324/1‑93 (MQ=255)
                                                                                  ttaaCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGAtt       >  2:1181795/1‑93 (MQ=255)
                                                                                   taaCGGCGTCAGAAAGTGCAGCACCGCTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGATTc      <  1:1117901/93‑1 (MQ=255)
                                                                                     aCGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGATTCTg    <  1:337295/93‑1 (MQ=255)
                                                                                      cGGCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGATTCTGc   <  1:6282470/93‑1 (MQ=255)
                                                                                       ggCGTCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGATTCTGcc  <  2:1937258/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTTCTTTCGATCAAATTAATAATCGTTTCGGAGGAGACTAGCGACAAAGTGACTTCCGGATAGCGTTCACGGAAAGGCTTAATTAACGGCATCAGAAAGTGCAGCACCACTGGAGTTGCGGCATCGATCCGTAACAGTCCACGCGGTGTATTACGCGTCTCCATAATTTCTGATTCTGCC  >  NC_000913/230466‑230645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑