BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,299,266	T→C	N503S (AAC→AGC)	napA ←	putative nitrate reductase 3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,299,266	0	T	C	100.0%	577.1 / NA	182	N503S (AAC→AGC)	napA	putative nitrate reductase 3
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (78/104); total (78/104)

Only 100 of 198 total aligned reads displayed.

CCCTCTTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGTTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACATTC  >  NC_000913/2299176‑2299355

cccTCTTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTg                                                                                         >  2:2826788/1‑93 (MQ=255)

 ccTCTTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgc                                                                                        >  2:1699465/1‑93 (MQ=255)

 ccTCTTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgc                                                                                        >  1:1460319/1‑93 (MQ=255)

 ccTCTTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgc                                                                                        <  2:450570/93‑1 (MQ=255)

  ctctTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgcg                                                                                       >  1:4230028/1‑93 (MQ=255)

  ctctTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgcg                                                                                       <  2:4411863/93‑1 (MQ=255)

   tgtttCGCTTCCCACACTGCGTTCGTCAGGATCAAGCCCGCGGCCAGCGCACTGTCTGTCGGATACGGATCGGAGACGATGATGAAGCTgcgc                                                                                      <  1:7477323/91‑1 (MQ=255)

   tctTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGCTACGGATCGGAGACGATGATGAAGCTgcgc                                                                                      >  1:1664946/1‑93 (MQ=255)

   tctTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgcgc                                                                                      >  1:4838308/1‑93 (MQ=255)

   tctTTCTCTACCCACATTGCGGTCGGCAGGATCAAGCCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTgcgc                                                                                      >  1:6785980/1‑93 (MQ=255)

    ctTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGcgcg                                                                                     <  1:1391905/93‑1 (MQ=255)

     tttCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCCGCGACGATTATGAAGCTGcgcga                                                                                    >  1:72972/1‑92 (MQ=255)

       tctcTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGAt                                                                                  >  1:788953/1‑93 (MQ=255)

       tctcTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGAt                                                                                  <  2:771106/93‑1 (MQ=255)

       tctcTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGAt                                                                                  <  1:962327/93‑1 (MQ=255)

        ctctACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATc                                                                                 <  2:882517/93‑1 (MQ=255)

           tACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATcgcg                                                                              >  2:6416948/1‑93 (MQ=255)

            aCCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCgcgc                                                                             >  2:1564242/1‑93 (MQ=255)

            aCCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCgcgc                                                                             >  2:1462149/1‑93 (MQ=255)

             cccACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGcc                                                                            <  1:7778287/93‑1 (MQ=255)

               cacaTTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAg                                                                          >  2:3256398/1‑93 (MQ=255)

                acaTTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGc                                                                         >  2:2026282/1‑93 (MQ=255)

                acaTTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGc                                                                         >  1:2798018/1‑93 (MQ=255)

                acaTTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGc                                                                         >  1:5035279/1‑93 (MQ=255)

                 caTTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGcc                                                                        <  1:4388127/93‑1 (MQ=255)

                  aTTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGccc                                                                       >  2:5015550/1‑93 (MQ=255)

                   ttGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCg                                                                      >  2:1734567/1‑93 (MQ=255)

                   ttGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCg                                                                      <  2:6707916/93‑1 (MQ=255)

                    tGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCgg                                                                     <  2:49006/93‑1 (MQ=255)

                      cGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCa                                                                   <  2:337742/93‑1 (MQ=255)

                      cGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCa                                                                   <  1:5870348/93‑1 (MQ=255)

                       ggTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCAt                                                                  >  1:3321609/1‑93 (MQ=255)

                       ggTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCAt                                                                  >  2:1275713/1‑93 (MQ=255)

                        gTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATa                                                                 >  1:1093929/1‑93 (MQ=255)

                        gTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATa                                                                 <  1:6352072/93‑1 (MQ=255)

                         tCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATAc                                                                >  1:7092587/1‑93 (MQ=255)

                         tCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATAc                                                                >  1:998680/1‑93 (MQ=255)

                           ggCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGc                                                              <  1:6838147/93‑1 (MQ=255)

                            gCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGct                                                             >  1:3393863/1‑93 (MQ=255)

                            gCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCCGATCGCGCCAGCCCGGCATACGct                                                             >  1:3418705/1‑93 (MQ=255)

                              aGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGctct                                                           >  1:4765829/1‑93 (MQ=255)

                               ggATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCtt                                                          >  1:5980832/1‑93 (MQ=255)

                                 aTCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCa                                                        <  2:6675299/93‑1 (MQ=255)

                                 aTCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCa                                                        <  2:6095859/93‑1 (MQ=255)

                                  tCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGCCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCAt                                                       <  2:4018753/93‑1 (MQ=255)

                                  tCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCAt                                                       >  2:1307414/1‑93 (MQ=255)

                                   cAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCAtt                                                      >  2:7851993/1‑93 (MQ=255)

                                   cAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCAtt                                                      <  1:1573953/93‑1 (MQ=255)

                                     aGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGa                                                    >  2:4150243/1‑93 (MQ=255)

                                     aGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGa                                                    <  2:4749373/93‑1 (MQ=255)

                                      gTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGAt                                                   <  1:754796/93‑1 (MQ=255)

                                         ggcggcCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGtt                                                <  1:4090056/93‑1 (MQ=255)

                                          gcggcCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTc                                               <  1:5776532/93‑1 (MQ=255)

                                          gcggcCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTc                                               <  2:5731999/93‑1 (MQ=255)

                                                aGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTcggcccg                                         >  1:7172651/1‑93 (MQ=255)

                                                  ggccctgactgTCGGATAAGGAACGCAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTcggcgcggc                                       <  1:6568179/89‑1 (MQ=255)

                                                   gcACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTcggcccggcc                                      >  1:2471495/1‑93 (MQ=255)

                                                   gcACTGACTGTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTcggcccggcc                                      >  1:2627239/1‑93 (MQ=255)

                                                      ctgactgTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGc                                   >  2:7070063/1‑93 (MQ=255)

                                                        gactgTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCAt                                 <  1:2132716/93‑1 (MQ=255)

                                                          ctgTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCAtgt                               <  1:1053386/93‑1 (MQ=255)

                                                           tgTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCAtgtt                              >  1:2083803/1‑93 (MQ=255)

                                                           tgTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCAtgtt                              >  2:1548338/1‑93 (MQ=255)

                                                            ttaggATACGGATCGGAGACGATGATGAAGCTGGGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCAtgttg                             <  2:4218413/90‑1 (MQ=255)

                                                            gTCGGATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCAtgttg                             <  1:5699574/93‑1 (MQ=255)

                                                               ggATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGttgttg                          <  1:7744835/93‑1 (MQ=255)

                                                               ggATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGttgttg                          <  2:2325329/93‑1 (MQ=255)

                                                                gATACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGATGTTgg                         >  1:2370539/1‑93 (MQ=255)

                                                                 aTACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGt                        >  2:6984630/1‑93 (MQ=255)

                                                                  tACGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGGTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTa                       <  2:6617306/93‑1 (MQ=255)

                                                                    cGGATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTaca                     <  2:7323968/93‑1 (MQ=255)

                                                                      gATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTAcaca                   <  2:6035387/93‑1 (MQ=255)

                                                                      gATCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTAcaca                   >  1:6561057/1‑93 (MQ=255)

                                                                       aTCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACAt                  <  2:5673280/93‑1 (MQ=255)

                                                                       aTCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACAt                  <  2:1526255/93‑1 (MQ=255)

                                                                        tCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATg                 <  1:6085942/93‑1 (MQ=255)

                                                                        tCGGAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATg                 >  1:7454177/1‑93 (MQ=255)

                                                                          ggAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGt               >  1:6918691/1‑93 (MQ=255)

                                                                          ggAGACGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGt               <  1:5479726/93‑1 (MQ=255)

                                                                           gagaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTc              <  2:1024915/93‑1 (MQ=255)

                                                                            agaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCTGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTcc             >  1:1398072/1‑93 (MQ=255)

                                                                            agaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTcc             >  2:6791812/1‑93 (MQ=255)

                                                                             gaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCa            <  1:1728854/93‑1 (MQ=255)

                                                                             gaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCa            >  1:4544609/1‑93 (MQ=255)

                                                                             gaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCa            <  2:4134814/93‑1 (MQ=255)

                                                                             gaCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCa            >  1:3639279/1‑93 (MQ=255)

                                                                              aCGATGATGAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAg           <  2:3690/93‑1 (MQ=255)

                                                                                 atgatgAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTaa        <  1:1020171/93‑1 (MQ=255)

                                                                                 atgatgAAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTaa        >  2:2472040/1‑93 (MQ=255)

                                                                                  tgatgaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTaac       >  1:3966479/1‑92 (MQ=255)

                                                                                  tgatgaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTaaa       <  2:4755829/93‑1 (MQ=255)

                                                                                  tgatgaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTaaa       >  1:5136379/1‑93 (MQ=255)

                                                                                    atgaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACa     <  1:335287/93‑1 (MQ=255)

                                                                                     tgaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACAt    >  1:4696540/1‑93 (MQ=255)

                                                                                      gaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACAtt   <  2:5183289/93‑1 (MQ=255)

                                                                                      gaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACAtt   <  2:6853346/93‑1 (MQ=255)

                                                                                      gaAGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACAtt   <  2:3119360/93‑1 (MQ=255)

                                                                                       aaGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACATTc  <  1:2358307/93‑1 (MQ=255)

                                                                                       aaGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACATTc  <  1:1857630/93‑1 (MQ=255)

                                                                                       aaGCTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACATTc  <  2:4610541/93‑1 (MQ=255)

CCCTCTTTCTCTACCCACATTGCGGTCGGCAGGATCAAGTCGGCGGCCAGCGCACTGACTGTCGGATACGGATCGGAGACGATGATGAAGTTGCGCGGATCGCGCCAGCCCGGCATACGCTCTTCATTGATGTTCGGCCCGGCCTGCATGTTGTTGGTACACATGGTCCAGTAAACATTC  >  NC_000913/2299176‑2299355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`