Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,306,256 T→C E127G (GAA→GGA)  yojI ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,306,2560TC99.5% 637.5 / NA 202E127G (GAA→GGA) yojIputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (108/93);  total (108/94)
Fisher's exact test for biased strand distribution p-value = 4.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 213 total aligned reads displayed.

ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC  >  NC_000913/2306166‑2306345
                                                                                          |                                                                                         
aTCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTccc                                                                                         >  2:3588518/1‑93 (MQ=255)
 tCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCg                                                                                        >  2:618677/1‑93 (MQ=255)
 tCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCg                                                                                        >  1:6495715/1‑93 (MQ=255)
     gATAGCCGTTACCAGCGACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg                                                                                    >  1:2425107/1‑93 (MQ=255)
     gATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg                                                                                    >  1:1621820/1‑93 (MQ=255)
      aTAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGa                                                                                   >  2:6352319/1‑93 (MQ=255)
       tAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGACCCGATAGTGAGAATGATCCCCTCCACCAGTCCCGGCAgcg                                                                                  >  1:6472065/1‑91 (MQ=255)
       tAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGAc                                                                                  <  2:6859992/93‑1 (MQ=255)
        aGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACg                                                                                 >  1:6616522/1‑93 (MQ=255)
        aGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACg                                                                                 >  2:1614983/1‑93 (MQ=255)
        aGCCGTTACCAGCAACATTTTGCCCGACAGAATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATGCCCTGCACCAGTCCCTGCataag                                                                                 >  2:1379473/1‑89 (MQ=255)
         gCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGc                                                                                >  2:4660215/1‑93 (MQ=255)
             ttACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa                                                                            <  1:925445/93‑1 (MQ=255)
             ttACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa                                                                            >  2:5452351/1‑93 (MQ=255)
             gtACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa                                                                            <  1:3478431/92‑1 (MQ=255)
                   gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa                                                                      <  1:3145324/93‑1 (MQ=255)
                   gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa                                                                      >  1:5626662/1‑93 (MQ=255)
                   gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa                                                                      >  2:330060/1‑93 (MQ=255)
                    cAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAt                                                                     <  1:63885/93‑1 (MQ=255)
                    cAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAt                                                                     <  2:216020/93‑1 (MQ=255)
                      aCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATgg                                                                   <  1:7549020/93‑1 (MQ=255)
                      aCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATgg                                                                   <  1:4820485/93‑1 (MQ=255)
                      aCATTTCGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATgg                                                                   <  1:49552/93‑1 (MQ=255)
                       cATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCGCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGt                                                                  >  1:183750/1‑93 (MQ=255)
                        aTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTg                                                                 >  1:1049791/1‑93 (MQ=255)
                        aTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTg                                                                 >  2:3858551/1‑93 (MQ=255)
                        aTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTg                                                                 >  2:7532030/1‑93 (MQ=255)
                         ttttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGa                                                                >  1:2076126/1‑93 (MQ=255)
                           ttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGata                                                              <  1:6884837/93‑1 (MQ=255)
                             gCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAtt                                                            <  2:2804494/93‑1 (MQ=255)
                                cGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcg                                                         >  1:2594274/1‑93 (MQ=255)
                                cGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcg                                                         >  2:6727471/1‑93 (MQ=255)
                                 gACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcgc                                                        >  2:2779441/1‑93 (MQ=255)
                                     gCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACAt                                                    <  2:1597316/93‑1 (MQ=255)
                                     gCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACAt                                                    <  2:2006273/93‑1 (MQ=255)
                                      cATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATc                                                   <  2:7486437/93‑1 (MQ=255)
                                      cATCCACAGATAAGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATc                                                   <  1:2782492/93‑1 (MQ=255)
                                       aTCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCg                                                  >  1:4446534/1‑93 (MQ=255)
                                        tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc                                                 >  1:4577020/1‑93 (MQ=255)
                                        tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc                                                 <  2:2729973/93‑1 (MQ=255)
                                        accACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc                                                 <  1:4168150/92‑1 (MQ=255)
                                         ccACAGATACGCCGCTGAACCGAGAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCt                                                <  2:4307338/93‑1 (MQ=255)
                                          cacaGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTg                                               <  1:3405017/93‑1 (MQ=255)
                                            caGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCGCATCGCTGGt                                             >  1:4355761/1‑93 (MQ=255)
                                             aGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCGCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGtt                                            <  1:1417678/93‑1 (MQ=255)
                                             aGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGtt                                            >  1:5347793/1‑93 (MQ=255)
                                              gATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTa                                           >  1:1377541/1‑93 (MQ=255)
                                               aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa                                          <  2:180278/93‑1 (MQ=255)
                                               aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa                                          <  1:2890932/93‑1 (MQ=255)
                                               aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa                                          <  2:7347454/93‑1 (MQ=255)
                                               aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa                                          >  1:3263593/1‑93 (MQ=255)
                                                tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAc                                         >  2:7841980/1‑93 (MQ=255)
                                                 aCGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGAGATTGCGCACATCGCTGGTTAAcc                                        <  2:5548647/93‑1 (MQ=255)
                                                  cgccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAccc                                       <  2:1243558/93‑1 (MQ=255)
                                                   gccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAcccc                                      <  2:3687220/93‑1 (MQ=255)
                                                    ccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCg                                     >  2:451410/1‑93 (MQ=255)
                                                    ccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCg                                     >  1:6436004/1‑93 (MQ=255)
                                                     cgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGc                                    >  2:1506888/1‑93 (MQ=255)
                                                     cgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGc                                    <  1:5905604/93‑1 (MQ=255)
                                                      gcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGcc                                   >  2:1759448/1‑93 (MQ=255)
                                                      gcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGcc                                   >  2:5364132/1‑93 (MQ=255)
                                                       cTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa                                  <  1:6736018/93‑1 (MQ=255)
                                                       cTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa                                  <  1:629875/93‑1 (MQ=255)
                                                       cTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa                                  <  2:2298895/93‑1 (MQ=255)
                                                       cTGAACCGATAGTGAGAATGAGCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa                                  <  2:5141839/93‑1 (MQ=255)
                                                         gAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGc                                >  1:7426066/1‑93 (MQ=255)
                                                          aaCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCa                               >  1:7893945/1‑93 (MQ=255)
                                                          aaCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCa                               >  2:1902244/1‑93 (MQ=255)
                                                           aCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCaa                              >  2:3974388/1‑93 (MQ=255)
                                                           aCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCaa                              <  2:7128792/93‑1 (MQ=255)
                                                            ccGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAAc                             >  2:283941/1‑93 (MQ=255)
                                                             cGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACg                            >  2:5895067/1‑93 (MQ=255)
                                                              gATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGa                           <  1:226811/93‑1 (MQ=255)
                                                               aTAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAg                          <  2:381391/93‑1 (MQ=255)
                                                                tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTACCCCCGCCAGCAACGAgg                         <  1:7641840/93‑1 (MQ=255)
                                                                tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg                         <  2:2381879/93‑1 (MQ=255)
                                                                tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg                         >  1:3076573/1‑93 (MQ=255)
                                                                tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg                         >  1:5016469/1‑93 (MQ=255)
                                                                 aGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgc                        >  2:6928131/1‑93 (MQ=255)
                                                                  gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg                       >  1:6005298/1‑93 (MQ=255)
                                                                    gagaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCt                     <  1:5426852/93‑1 (MQ=255)
                                                                     agaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTa                    >  1:3489060/1‑93 (MQ=255)
                                                                      gaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTAc                   >  1:5481439/1‑93 (MQ=255)
                                                                         tGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa                <  1:5303295/93‑1 (MQ=255)
                                                                         tGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa                <  2:6065625/93‑1 (MQ=255)
                                                                           aTCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgt              >  2:5816800/1‑93 (MQ=255)
                                                                           aTCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgt              >  2:1566035/1‑93 (MQ=255)
                                                                             ccccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttg            <  1:3848723/93‑1 (MQ=255)
                                                                              cccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttgt           >  1:3966518/1‑93 (MQ=255)
                                                                               ccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttgtt          <  2:4411705/93‑1 (MQ=255)
                                                                                cTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTc         <  2:6584841/93‑1 (MQ=255)
                                                                                 tGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCa        >  1:1254215/1‑93 (MQ=255)
                                                                                 tGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCa        <  1:5564620/93‑1 (MQ=255)
                                                                                  gCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCaa       <  1:3685226/93‑1 (MQ=255)
                                                                                  gCACCAGACCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCaa       <  2:6996867/93‑1 (MQ=255)
                                                                                   cACCAGTCCCGGCAGACGCACAAAAGCGATGGTGATATTCCGCACTTCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAt      <  1:7299668/93‑1 (MQ=255)
                                                                                    cccAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATg     <  2:7707606/92‑1 (MQ=255)
                                                                                    aCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATg     >  1:2340344/1‑93 (MQ=255)
                                                                                      cAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATgcg   <  1:2976830/93‑1 (MQ=255)
                                                                                       aGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGGGTTGTTCAATgcgc  >  1:4654969/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC  >  NC_000913/2306166‑2306345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: