BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,387,710	T→C	V193A (GTG→GCG)	b2275 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,387,710	0	T	C	99.6%	811.6 / ‑4.9	253	V193A (GTG→GCG)	b2275	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (119/133); total (119/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.41e-01

Only 100 of 255 total aligned reads displayed.

TTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGTGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTG  >  NC_000913/2387620‑2387799

ttGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGa                                                                                         >  2:6052214/1‑93 (MQ=255)

    cAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCa                                                                                     <  1:5740613/93‑1 (MQ=255)

     aaTTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAg                                                                                    <  1:4409658/93‑1 (MQ=255)

     aaTTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAg                                                                                    >  2:4105948/1‑93 (MQ=255)

     aaTTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAg                                                                                    >  1:5028383/1‑93 (MQ=255)

      aTTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGt                                                                                   >  1:2741688/1‑93 (MQ=255)

      aTTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGt                                                                                   <  1:2592810/93‑1 (MQ=255)

         gggCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCa                                                                                <  2:1174860/93‑1 (MQ=255)

          ggCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCAt                                                                               >  1:4279316/1‑93 (MQ=255)

            cATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTa                                                                             <  1:7304422/93‑1 (MQ=255)

             aTTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTaa                                                                            <  1:4072459/93‑1 (MQ=255)

              tttGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTaaa                                                                           >  1:5817029/1‑93 (MQ=255)

              tttGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTaaa                                                                           <  2:5342918/93‑1 (MQ=255)

                tGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGa                                                                         <  2:3773094/93‑1 (MQ=255)

                tGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGa                                                                         <  2:1837868/93‑1 (MQ=255)

                 ggTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGaa                                                                        <  1:3830157/93‑1 (MQ=255)

                  gtgtTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAAc                                                                       <  1:2075078/93‑1 (MQ=255)

                   tgtTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACa                                                                      >  2:5695820/1‑93 (MQ=255)

                   tgtTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACa                                                                      <  1:1036535/93‑1 (MQ=255)

                    gtTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACaa                                                                     >  2:4605599/1‑93 (MQ=255)

                     ttCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAg                                                                    <  1:764149/93‑1 (MQ=255)

                     ttCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAg                                                                    >  1:2968563/1‑93 (MQ=255)

                      tCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAgg                                                                   <  2:211274/93‑1 (MQ=255)

                       ccTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGa                                                                  >  2:2608326/1‑93 (MQ=255)

                        cTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAt                                                                 >  1:907746/1‑93 (MQ=255)

                        cTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAt                                                                 <  1:6561084/93‑1 (MQ=255)

                        cTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAt                                                                 >  2:6982964/1‑93 (MQ=255)

                        cTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAt                                                                 <  1:101419/93‑1 (MQ=255)

                        cTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAt                                                                 >  2:630328/1‑93 (MQ=255)

                         tGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAtt                                                                <  1:3465815/93‑1 (MQ=255)

                         tGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGAtt                                                                >  1:1727171/1‑93 (MQ=255)

                          gACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTa                                                               <  2:4313226/93‑1 (MQ=255)

                          gACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTa                                                               <  2:2314178/93‑1 (MQ=255)

                           aCAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAg                                                              >  1:7517149/1‑93 (MQ=255)

                            cAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGa                                                             <  1:6248249/93‑1 (MQ=255)

                            cAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGa                                                             >  1:6316044/1‑93 (MQ=255)

                             aaTAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGAt                                                            <  2:2258182/93‑1 (MQ=255)

                             aaTAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGAt                                                            >  1:6755377/1‑93 (MQ=255)

                              aTAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATc                                                           >  2:3321096/1‑93 (MQ=255)

                              aTAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATc                                                           >  2:6358953/1‑93 (MQ=255)

                                aaaGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCtt                                                         >  1:778731/1‑93 (MQ=255)

                                 aaGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTa                                                        <  1:6742350/93‑1 (MQ=255)

                                     cattcattTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCtt                                                    >  2:7155290/1‑93 (MQ=255)

                                      attcattTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCttt                                                   <  2:769346/93‑1 (MQ=255)

                                      attcattTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCttt                                                   <  1:5580577/93‑1 (MQ=255)

                                       ttcattTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTg                                                  <  1:390596/93‑1 (MQ=255)

                                        tcattTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTgg                                                 <  1:5219884/93‑1 (MQ=255)

                                         cattTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTgga                                                <  2:4890913/93‑1 (MQ=255)

                                          attTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTggag                                               <  1:5391189/93‑1 (MQ=255)

                                          attTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTggag                                               <  2:2374066/93‑1 (MQ=255)

                                          attTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTggag                                               <  1:735838/93‑1 (MQ=255)

                                           tttGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTggagg                                              >  1:2902449/1‑93 (MQ=255)

                                           tttGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTggagg                                              >  2:6500854/1‑93 (MQ=255)

                                            ttGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTggagga                                             <  2:7287628/93‑1 (MQ=255)

                                             tGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGaa                                            <  2:6527867/93‑1 (MQ=255)

                                              gCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAAc                                           <  1:143487/93‑1 (MQ=255)

                                              gCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAAc                                           <  2:3728772/93‑1 (MQ=255)

                                                tGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACaa                                         >  2:5588752/1‑93 (MQ=255)

                                                  tCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAg                                       >  1:649878/1‑93 (MQ=255)

                                                      aGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGaaa                                   <  2:1093597/93‑1 (MQ=255)

                                                      aGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGaaa                                   >  2:6462685/1‑93 (MQ=255)

                                                       ggCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGaaaa                                  <  2:2788538/93‑1 (MQ=255)

                                                       ggCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGaaaa                                  >  1:829627/1‑93 (MQ=255)

                                                        gCCGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaat                                 <  2:5065188/93‑1 (MQ=255)

                                                         ccGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaata                                >  2:6310287/1‑93 (MQ=255)

                                                          cGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataa                               >  2:5953781/1‑93 (MQ=255)

                                                          cGCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataa                               <  2:1244402/93‑1 (MQ=255)

                                                           gCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataat                              <  2:4772799/93‑1 (MQ=255)

                                                           gCAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataat                              <  2:7082243/93‑1 (MQ=255)

                                                            cAGATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataata                             >  2:6684707/1‑93 (MQ=255)

                                                              gATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataataat                           <  2:2012721/93‑1 (MQ=255)

                                                              gATGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAaataataat                           >  2:7628595/1‑93 (MQ=255)

                                                                tGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTa                         <  1:322230/93‑1 (MQ=255)

                                                                tGTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTa                         <  2:6848538/93‑1 (MQ=255)

                                                                 gTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTAc                        >  2:3179318/1‑93 (MQ=255)

                                                                 gTCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTAc                        >  1:4644913/1‑93 (MQ=255)

                                                                  tCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTAcc                       <  2:3896170/93‑1 (MQ=255)

                                                                  tCCCGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTAcc                       <  1:6001913/93‑1 (MQ=255)

                                                                    ccGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTAcccc                     <  2:4526926/93‑1 (MQ=255)

                                                                    ccGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTAcccc                     <  1:7397555/93‑1 (MQ=255)

                                                                     cGAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCt                    >  2:5131609/1‑93 (MQ=255)

                                                                      gAATTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCtt                   <  2:5396890/93‑1 (MQ=255)

                                                                        aTTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGa                 >  1:2328411/1‑93 (MQ=255)

                                                                        aTTTCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTT‑GAGGAACCAAGGGAAATAATAATTAACCCTTGaa                >  2:7861947/1‑92 (MQ=255)

                                                                         tttCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGAt                <  1:4751580/93‑1 (MQ=255)

                                                                         tttCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGAt                <  2:7344268/93‑1 (MQ=255)

                                                                         tttCCAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGAt                <  1:4478905/93‑1 (MQ=255)

                                                                            ccAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCa             >  1:7806443/1‑93 (MQ=255)

                                                                             cAGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAg            >  1:3571099/1‑93 (MQ=255)

                                                                              aGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGa           <  2:3253356/93‑1 (MQ=255)

                                                                              aGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGa           <  2:3107926/93‑1 (MQ=255)

                                                                              aGGATGATCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAAGTACCCCTTGATGCAGa           >  1:7039607/1‑93 (MQ=255)

                                                                                gatgatCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAACGGAAAATAATAATTACCCCTTGATGCAGAtg         >  1:2172131/1‑93 (MQ=255)

                                                                                gatgatCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGAtg         >  1:1101250/1‑93 (MQ=255)

                                                                                 atgatCCTGCGATTCAGTGCATTAAAGAACAGGGATTGGATCTTAGCTTTGGGGGAACAAGGGAAAATAATATTTACCCCTTG‑TGCAAAtgtg       >  2:5782147/1‑93 (MQ=255)

                                                                                  tgatCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGAtgtg       <  1:1354687/93‑1 (MQ=255)

                                                                                  tgatCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGAtgtg       <  2:1554116/93‑1 (MQ=255)

                                                                                   gatCCTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGAtgtgt      <  1:3851291/93‑1 (MQ=255)

                                                                                      ccTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGtt   <  1:7396299/93‑1 (MQ=255)

                                                                                       cTGCGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTg  >  1:1647909/1‑93 (MQ=255)

TTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGTGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTG  >  NC_000913/2387620‑2387799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`