Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,391,348 A→G A573A (GCT→GCC)  nuoL ← NADH dehydrogenase I chain L

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,391,3480AG99.1% 690.0 / NA 222A573A (GCT→GCC) nuoLNADH dehydrogenase I chain L
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (112/108);  minor base T (2/0);  total (114/108)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 231 total aligned reads displayed.

GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACA  >  NC_000913/2391258‑2391436
                                                                                          |                                                                                        
gACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGc                                                                                        <  2:7754695/93‑1 (MQ=255)
  ccGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCg                                                                                      <  2:6217050/93‑1 (MQ=255)
    gCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCggg                                                                                    >  1:5387284/1‑93 (MQ=255)
     cACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGa                                                                                   <  1:299526/93‑1 (MQ=255)
       ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg                                                                                 <  2:162922/93‑1 (MQ=255)
       ccGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATg                                                                                 <  1:2455888/93‑1 (MQ=255)
          aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGATGGCCGGGATGTtc                                                                              >  1:1293411/1‑93 (MQ=255)
          aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtc                                                                              >  1:1866750/1‑93 (MQ=255)
          aTGCTCATGGATGCCACATACCAGCGCAGATAGCCGGTCTCACTTAACAGCAGACCTTTACCTGCAAATCGGGAAAGGACGGCCGGGATGTtc                                                                              >  1:6094907/1‑93 (MQ=255)
           tGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtca                                                                             >  2:6391671/1‑93 (MQ=255)
              tCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCATTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTtcatca                                                                          <  1:3197467/93‑1 (MQ=255)
               cATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTcatcat                                                                         <  2:6069501/93‑1 (MQ=255)
                aTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAtt                                                                        >  2:3199369/1‑93 (MQ=255)
                aTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAtt                                                                        >  1:6272907/1‑93 (MQ=255)
                aTGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCAtt                                                                        <  2:7127208/93‑1 (MQ=255)
                 tGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTg                                                                       <  1:1148020/93‑1 (MQ=255)
                  ggATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGa                                                                      >  1:414870/1‑93 (MQ=255)
                    aTGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGt                                                                    <  1:803823/93‑1 (MQ=255)
                     tGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGtt                                                                   <  2:4791466/93‑1 (MQ=255)
                     tGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGtt                                                                   <  1:2221285/93‑1 (MQ=255)
                       ccACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCa                                                                 <  1:7391830/93‑1 (MQ=255)
                        cacaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAg                                                                >  2:6971238/1‑93 (MQ=255)
                         acaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGc                                                               <  1:905857/93‑1 (MQ=255)
                         acaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGc                                                               >  1:4390140/1‑93 (MQ=255)
                         acaTACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGc                                                               >  1:4855721/1‑93 (MQ=255)
                            tACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa                                                            >  1:4564469/1‑93 (MQ=255)
                            tACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGa                                                            >  2:1832685/1‑93 (MQ=255)
                             tccAGCGCAGGTAGCCGTTCTCACTTAACAGCAGTCCTTTCCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt                                                           <  1:6033011/92‑1 (MQ=255)
                             aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGGCCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt                                                           <  1:4451373/93‑1 (MQ=255)
                             aCCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGAt                                                           <  1:2304557/93‑1 (MQ=255)
                               cAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcg                                                         >  2:1160239/1‑93 (MQ=255)
                               cAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcg                                                         >  2:5969280/1‑93 (MQ=255)
                                aGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATcgc                                                        >  1:2856618/1‑93 (MQ=255)
                                  cgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGt                                                      <  2:3821011/93‑1 (MQ=255)
                                  cgcAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGt                                                      <  1:6390589/93‑1 (MQ=255)
                                    cAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGttt                                                    >  1:108810/1‑93 (MQ=255)
                                     aGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTc                                                   <  2:5606850/93‑1 (MQ=255)
                                      gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa                                                  >  1:938422/1‑93 (MQ=255)
                                      gATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCa                                                  >  2:1986975/1‑93 (MQ=255)
                                       aTAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAg                                                 >  2:1292918/1‑93 (MQ=255)
                                        tAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGc                                                <  1:7573063/93‑1 (MQ=255)
                                          gCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCaa                                              >  2:3583067/1‑93 (MQ=255)
                                          gCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCaa                                              >  2:5499352/1‑93 (MQ=255)
                                          gCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCaa                                              <  1:5885931/93‑1 (MQ=255)
                                            cGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAAcc                                            >  1:3109341/1‑93 (MQ=255)
                                              ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCCACAAg                                          >  1:3159994/1‑93 (MQ=255)
                                              ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg                                          >  1:6973642/1‑93 (MQ=255)
                                              ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg                                          <  2:4887637/93‑1 (MQ=255)
                                              ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg                                          >  1:1207820/1‑93 (MQ=255)
                                              ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg                                          >  1:4716529/1‑93 (MQ=255)
                                              ttCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAg                                          >  1:352288/1‑93 (MQ=255)
                                                ctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGc                                        <  1:167755/93‑1 (MQ=255)
                                                ctcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGc                                        <  1:3748032/93‑1 (MQ=255)
                                                 tcACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCa                                       >  2:576751/1‑93 (MQ=255)
                                                   aCTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAAt                                     >  2:6817292/1‑93 (MQ=255)
                                                    cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa                                    <  1:7845590/93‑1 (MQ=255)
                                                    cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa                                    <  1:7324595/93‑1 (MQ=255)
                                                    cTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATa                                    >  2:1230124/1‑93 (MQ=255)
                                                     ttAACAGCAGACCTTTACCTGCAAAGCGGGCAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCTGCAACCAGGCAAttc                                   >  2:4935989/1‑91 (MQ=255)
                                                     ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc                                   >  2:780495/1‑93 (MQ=255)
                                                     ttAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAc                                   >  1:2629986/1‑93 (MQ=255)
                                                      tAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAcc                                  >  1:3638411/1‑93 (MQ=255)
                                                      tAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATAcc                                  <  2:3976389/93‑1 (MQ=255)
                                                         cagcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAg                               <  2:6786671/93‑1 (MQ=255)
                                                           gcagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGa                             >  2:7667152/1‑93 (MQ=255)
                                                            cagACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGaa                            <  2:3665332/93‑1 (MQ=255)
                                                             agACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAAc                           <  2:4127341/93‑1 (MQ=255)
                                                              gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg                          >  1:4952770/1‑93 (MQ=255)
                                                              gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg                          >  2:737612/1‑93 (MQ=255)
                                                              gACCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACg                          >  2:4375413/1‑93 (MQ=255)
                                                               aCCTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACgg                         <  2:5284595/93‑1 (MQ=255)
                                                                ccTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGc                        >  1:158744/1‑93 (MQ=255)
                                                                 cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGCACGGCt                       >  2:2772690/1‑93 (MQ=255)
                                                                 cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt                       <  2:6363686/93‑1 (MQ=255)
                                                                 cTTTACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCt                       <  1:704111/93‑1 (MQ=255)
                                                                  tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt                      >  2:4438311/1‑93 (MQ=255)
                                                                  tttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCtt                      <  2:2228661/93‑1 (MQ=255)
                                                                   ttACCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTg                     >  2:5664790/1‑93 (MQ=255)
                                                                     aCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAc                   <  2:7175000/93‑1 (MQ=255)
                                                                     aCCTGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGAc                   <  1:3869192/93‑1 (MQ=255)
                                                                        tGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa                <  2:3750469/93‑1 (MQ=255)
                                                                        tGCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGaa                <  1:1365594/93‑1 (MQ=255)
                                                                         gCAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAac               <  1:7471047/93‑1 (MQ=255)
                                                                          cAAAGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAaca              >  1:2027794/1‑93 (MQ=255)
                                                                           aaaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAacac             >  2:6175421/1‑93 (MQ=255)
                                                                            aaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACt            <  1:4283407/93‑1 (MQ=255)
                                                                            aaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACt            >  1:1234337/1‑93 (MQ=255)
                                                                            aaGCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACt            >  2:1478584/1‑93 (MQ=255)
                                                                              gCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACttt          <  2:1085481/93‑1 (MQ=255)
                                                                              gCGGGAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACttt          <  1:711644/93‑1 (MQ=255)
                                                                                gggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTgc        >  1:6173865/1‑92 (MQ=255)
                                                                                gggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGt        <  1:5145891/93‑1 (MQ=255)
                                                                                 ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc       >  2:6488310/1‑93 (MQ=255)
                                                                                 ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc       <  1:7265330/93‑1 (MQ=255)
                                                                                 ggAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTc       >  1:7781847/1‑93 (MQ=255)
                                                                                  gAAAGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCa      >  2:6143287/1‑93 (MQ=255)
                                                                                   gaaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCAt     <  1:512866/92‑1 (MQ=255)
                                                                                    aaGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATa    <  1:5452274/93‑1 (MQ=255)
                                                                                     aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGTATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc   >  1:5545981/1‑93 (MQ=255)
                                                                                     aGGACGGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATAc   <  2:3760907/93‑1 (MQ=255)
                                                                                          |                                                                                        
GACCGCACCGATGCTCATGGATGCCACATACCAGCGCAGATAGCCGTTCTCACTTAACAGCAGACCTTTACCTGCAAAGCGGGAAAGGACAGCCGGGATGTTCATCATTGAGTTCAGCGGATCGCGTTTCAGCAACCAGGCAATACCCAGGAACGGCTTGACGAACACTTTGTCATACA  >  NC_000913/2391258‑2391436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑