BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,442,106	A→G	S28S (AGT→AGC)	b2325 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,442,106	0	A	G	99.6%	780.7 / ‑5.5	249	S28S (AGT→AGC)	b2325	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (124/123); total (124/125)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 257 total aligned reads displayed.

GCTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCACTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATCTTCTT  >  NC_000913/2442016‑2442195

 cTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTg                                                                                        <  2:1102797/93‑1 (MQ=255)

 cTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTg                                                                                        <  1:4201871/93‑1 (MQ=255)

  tAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCTCTgg                                                                                       <  2:3843323/93‑1 (MQ=255)

    aCGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCa                                                                                     >  2:5558310/1‑93 (MQ=255)

       gTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAaac                                                                                  <  1:78154/93‑1 (MQ=255)

         cGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAaacaa                                                                                <  1:5305320/93‑1 (MQ=255)

          gTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAaacaac                                                                               >  2:4763461/1‑93 (MQ=255)

           tATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCACACAACt                                                                              >  2:7091866/1‑93 (MQ=255)

           tATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACt                                                                              >  2:4433767/1‑93 (MQ=255)

              gCACCGCCTGGGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcat                                                                           >  1:6486208/1‑93 (MQ=255)

              gCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcat                                                                           <  1:5767323/93‑1 (MQ=255)

                aCCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatca                                                                         >  1:4849857/1‑93 (MQ=255)

                 ccGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcat                                                                        >  1:7626937/1‑93 (MQ=255)

                 ccGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcat                                                                        >  1:6422613/1‑93 (MQ=255)

                 ccGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcat                                                                        <  1:3074780/93‑1 (MQ=255)

                  cGCCTGAGCGGAGTGGTCATCACGACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcatc                                                                       >  1:6360907/1‑93 (MQ=255)

                    ccTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCAc                                                                     <  1:5967504/93‑1 (MQ=255)

                    ccTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCAc                                                                     <  1:5566202/93‑1 (MQ=255)

                     cTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACt                                                                    >  1:4931111/1‑93 (MQ=255)

                      tGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTg                                                                   >  1:2576507/1‑93 (MQ=255)

                       gAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTgg                                                                  >  2:4725751/1‑93 (MQ=255)

                         gCGGAGTGCTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGTTGCCCACGCAAATCCCCGCTGGCAAACAACTCATCACCCCTGGCa                                                                <  2:5013346/93‑1 (MQ=255)

                          cGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCAt                                                               <  2:3787529/93‑1 (MQ=255)

                            gAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATgg                                                             <  1:3577964/93‑1 (MQ=255)

                            gAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATgg                                                             <  1:262830/93‑1 (MQ=255)

                            gAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATgg                                                             <  2:4588259/93‑1 (MQ=255)

                             aGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGt                                                            >  1:6768917/1‑93 (MQ=255)

                             aGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGt                                                            >  1:1879682/1‑93 (MQ=255)

                             aGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGt                                                            >  2:6397667/1‑93 (MQ=255)

                               tGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCa                                                          >  1:3892121/1‑93 (MQ=255)

                                ggTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCaa                                                         >  2:2894200/1‑93 (MQ=255)

                                 gTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAAc                                                        <  1:1380465/93‑1 (MQ=255)

                                   catcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCa                                                      <  1:4376958/93‑1 (MQ=255)

                                   catcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCa                                                      >  1:3999957/1‑93 (MQ=255)

                                    atcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCAt                                                     >  1:3944788/1‑93 (MQ=255)

                                     tcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATa                                                    >  2:3544477/1‑93 (MQ=255)

                                     tcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATa                                                    >  1:3038186/1‑93 (MQ=255)

                                     tcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATa                                                    >  1:2484207/1‑93 (MQ=255)

                                     tcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCAAGGTCAACCATa                                                    <  1:7246910/93‑1 (MQ=255)

                                       acctcTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  <  1:4645676/93‑1 (MQ=255)

                                       accacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  >  1:7664222/1‑93 (MQ=255)

                                       accacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  >  2:1284606/1‑93 (MQ=255)

                                       accacTTTCCAGTGCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  <  2:874758/93‑1 (MQ=255)

                                        ccacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCg                                                 >  1:2109839/1‑93 (MQ=255)

                                         cacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGt                                                <  1:2070611/93‑1 (MQ=255)

                                          acTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTc                                               >  2:736386/1‑93 (MQ=255)

                                           cTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCg                                              >  1:2296337/1‑93 (MQ=255)

                                            tttCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGa                                             <  1:1307647/93‑1 (MQ=255)

                                              tCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGAtt                                           <  1:3269810/93‑1 (MQ=255)

                                              tCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGAtt                                           >  2:5945600/1‑93 (MQ=255)

                                              tCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGAtt                                           <  2:7680255/93‑1 (MQ=255)

                                                cAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTaa                                         <  1:3798319/93‑1 (MQ=255)

                                                cAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTaa                                         >  1:649162/1‑93 (MQ=255)

                                                cAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTaa                                         <  2:1710794/93‑1 (MQ=255)

                                                 aGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAAt                                        >  1:789708/1‑93 (MQ=255)

                                                 aGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAAt                                        <  1:4258640/93‑1 (MQ=255)

                                                     cTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCa                                    <  2:7762538/93‑1 (MQ=255)

                                                       gCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGa                                  >  1:7299674/1‑93 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 >  2:6505894/1‑93 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 <  2:1985999/93‑1 (MQ=255)

                                                         gATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAAt                                <  2:2202268/93‑1 (MQ=255)

                                                         gATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAAt                                <  2:2674733/93‑1 (MQ=255)

                                                          aTGGCTAATGTCAGGTGGTCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATg                               >  1:5371547/1‑93 (MQ=255)

                                                          aTGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATg                               >  1:6903210/1‑93 (MQ=255)

                                                          aTGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATg                               <  2:2337054/93‑1 (MQ=255)

                                                             gCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGt                            <  1:2942637/93‑1 (MQ=255)

                                                               tAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGa                          >  2:3194906/1‑93 (MQ=255)

                                                               tAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAAATCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGa                          >  2:5593095/1‑93 (MQ=255)

                                                                 aTGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGAtt                        >  1:6998651/1‑93 (MQ=255)

                                                                 aTGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGAtt                        <  1:282803/93‑1 (MQ=255)

                                                                 aTGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGAtt                        <  2:7415269/93‑1 (MQ=255)

                                                                  tGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTc                       >  2:7284268/1‑93 (MQ=255)

                                                                    tCAGGCGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTcta                     >  1:4560195/1‑91 (MQ=255)

                                                                     cAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCaaa                    <  2:6706664/93‑1 (MQ=255)

                                                                      aGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGGCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAAc                   >  1:1780423/1‑93 (MQ=255)

                                                                      aGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTAGCATGGTCAACCATACCATCGATTAATGCCAGAATGCGTGATTCAAAc                   >  2:1142986/1‑93 (MQ=255)

                                                                       ggTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACt                  >  2:3578751/1‑93 (MQ=255)

                                                                       ggTGGCCACGCAAATACCCACTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACt                  <  1:1829825/93‑1 (MQ=255)

                                                                        gTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTc                 <  2:6279600/93‑1 (MQ=255)

                                                                        gTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTc                 <  1:5152127/93‑1 (MQ=255)

                                                                        gTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTc                 <  1:708749/93‑1 (MQ=255)

                                                                          ggCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTccc               >  2:4124961/1‑92 (MQ=255)

                                                                           gCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCcgc              >  1:1424581/1‑93 (MQ=255)

                                                                              aCGCAAATCCCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGat           <  2:1553217/93‑1 (MQ=255)

                                                                              aCGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGat           >  1:5994100/1‑93 (MQ=255)

                                                                               cGCAAATCCCGGCTGGCAAACAACCCATAATC‑CTGGAAATGATAACCAATCCCTCGATTAATGCCAGAATGCGTGATTCAAACCCCGCGatca         <  2:404756/93‑1 (MQ=255)

                                                                                gCAAATCCCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatca         <  2:5883811/93‑1 (MQ=255)

                                                                                  aaaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatcatc       >  2:2794727/1‑93 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGGTCAtct      >  1:2931063/1‑93 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtct      <  1:3701478/93‑1 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtct      >  2:5164174/1‑93 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtct      >  2:2734574/1‑93 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCCatcatcc      <  2:4798766/93‑2 (MQ=255)

                                                                                    aTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtctt     >  1:7551045/1‑93 (MQ=255)

                                                                                     tACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtcttt    >  2:1500060/1‑92 (MQ=255)

                                                                                      aCCCGCTGGCAAACAACTCATCATCACTGGCAATGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtcttct   <  2:6079134/93‑1 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  <  1:1586507/93‑1 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  <  2:5682130/93‑1 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  <  2:4504428/93‑1 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  <  1:6257357/93‑1 (MQ=255)

GCTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCACTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATCTTCTT  >  NC_000913/2442016‑2442195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`