BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,590,989	T→C	intergenic (+7/+103)	b4537 → / ← ypfH	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,590,989	0	T	C	100.0%	925.7 / NA	294	intergenic (+7/+103)	b4537/ypfH	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (142/152); total (142/152)

Only 100 of 307 total aligned reads displayed.

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

ccGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAgcgc                                                                                         <  1:4903652/93‑1 (MQ=255)

 cGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCt                                                                                        <  1:1914328/93‑1 (MQ=255)

  ggAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTc                                                                                       >  1:7308569/1‑93 (MQ=255)

  ggAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTc                                                                                       <  1:6654867/93‑1 (MQ=255)

  ggAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTc                                                                                       >  2:3630584/1‑93 (MQ=255)

   gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCa                                                                                      >  1:1718813/1‑93 (MQ=255)

   gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGATGAGCGCTCa                                                                                      >  2:1316272/1‑93 (MQ=255)

     gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAc                                                                                    >  1:4431917/1‑93 (MQ=255)

     gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAc                                                                                    >  2:3960235/1‑93 (MQ=255)

         tccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  1:6565665/92‑1 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  1:4959959/93‑1 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  1:2724923/93‑1 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  1:3635538/93‑1 (MQ=255)

          ccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               >  2:5556383/1‑93 (MQ=255)

          ccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               <  1:4712204/93‑1 (MQ=255)

          ccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               >  1:4560942/1‑93 (MQ=255)

           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              >  2:1144356/1‑93 (MQ=255)

           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              <  1:2274221/93‑1 (MQ=255)

             cGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGcc                                                                            <  2:5206465/93‑1 (MQ=255)

                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  1:7817436/1‑93 (MQ=255)

                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  1:6302737/1‑93 (MQ=255)

                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         <  1:4632297/93‑1 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        <  2:85487/93‑1 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        >  2:4831575/1‑93 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        >  2:5164180/1‑93 (MQ=255)

                  cGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATa                                                                       <  1:3997777/93‑1 (MQ=255)

                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      <  2:3324408/93‑1 (MQ=255)

                     gATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAgg                                                                    >  2:6459701/1‑93 (MQ=255)

                     gATTTCAACGATAAGTGGGACGACGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAgg                                                                    <  2:4295610/93‑1 (MQ=255)

                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   <  1:2154822/93‑1 (MQ=255)

                       tttCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCg                                                                  <  1:1328711/93‑1 (MQ=255)

                        ttCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGt                                                                 <  2:2889585/93‑1 (MQ=255)

                         tCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGtt                                                                >  2:3854756/1‑93 (MQ=255)

                          cAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTa                                                               >  2:3295685/1‑93 (MQ=255)

                          cAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTa                                                               >  1:3285073/1‑93 (MQ=255)

                           aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              >  1:2540044/1‑93 (MQ=255)

                            aCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAc                                                             <  1:5611992/93‑1 (MQ=255)

                             cGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcg                                                            <  2:1383383/93‑1 (MQ=255)

                             cGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcg                                                            >  1:6637587/1‑93 (MQ=255)

                              gATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           <  1:602342/93‑1 (MQ=255)

                              gATAAGTGGGACGATGACGACGACTGGACGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           <  1:211239/93‑1 (MQ=255)

                                 aaGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgccgc                                                        >  2:7065429/1‑93 (MQ=255)

                                  aGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCa                                                       >  2:4513744/1‑93 (MQ=255)

                                  aGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCa                                                       >  2:802143/1‑93 (MQ=255)

                                  aGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCa                                                       <  1:3513914/93‑1 (MQ=255)

                                    tGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATc                                                     <  2:3383573/93‑1 (MQ=255)

                                     gggACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATcc                                                    >  2:4354174/1‑93 (MQ=255)

                                     gggACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATcc                                                    <  2:7508895/93‑1 (MQ=255)

                                     gggACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATcc                                                    <  1:1112299/93‑1 (MQ=255)

                                      ggACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCg                                                   <  1:1229840/93‑1 (MQ=255)

                                       gACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCgg                                                  >  1:994391/1‑93 (MQ=255)

                                          gaggacgccgacTGGCCAAAAAAGGATCAACCAAAGAAGTAAGCGGAGCGCTCAACCGTAGGCCGGATAAGGCTTTAACGCCGCATCCGGCaa                                               <  2:1626444/90‑1 (MQ=25)

                                          gATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCaa                                               >  2:4390437/1‑93 (MQ=255)

                                           aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              >  2:7769903/1‑93 (MQ=255)

                                           aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              <  2:5294449/93‑1 (MQ=255)

                                           aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              <  1:6406490/93‑1 (MQ=255)

                                           aTGACGACGACTGGCCAAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCACCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              <  2:5660136/93‑1 (MQ=255)

                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             <  1:912647/93‑1 (MQ=255)

                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             <  1:6939453/93‑1 (MQ=255)

                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATg                                             <  2:3664666/93‑1 (MQ=255)

                                            tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGACCGCTCAACCGTAGGCCGGATAAAGCGTTAACGCCGCATCCGGCAATg                                             >  1:3114855/1‑93 (MQ=255)

                                             gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATgg                                            >  1:6747969/1‑93 (MQ=255)

                                             gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATgg                                            <  2:5016156/93‑1 (MQ=255)

                                                 acgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAGGCCGCATACGGCAATGGAGaa                                        >  2:2771708/1‑93 (MQ=38)

                                                    gcTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  2:4620060/92‑1 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  1:4787051/93‑1 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  2:667838/93‑1 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  1:5296202/93‑1 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     >  2:1951021/1‑93 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  1:7240090/93‑1 (MQ=255)

                                                       ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGc                                  <  1:1533242/93‑1 (MQ=255)

                                                          cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTg                               <  2:1935236/93‑1 (MQ=255)

                                                          cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTg                               >  2:6317395/1‑93 (MQ=255)

                                                           gAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                              >  2:5606668/1‑93 (MQ=255)

                                                           gAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                              <  2:5789649/93‑1 (MQ=255)

                                                            aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                             <  1:6170945/93‑1 (MQ=255)

                                                             aaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                            >  2:2514389/1‑93 (MQ=255)

                                                             aaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                            >  2:5866122/1‑93 (MQ=255)

                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:2936813/93‑1 (MQ=255)

                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:5523210/93‑1 (MQ=255)

                                                                      aaCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                   <  1:5789953/93‑1 (MQ=255)

                                                                       aCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAc                  >  1:4134430/1‑93 (MQ=255)

                                                                       aCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAc                  >  1:888279/1‑93 (MQ=255)

                                                                         cGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgc                >  2:7154004/1‑93 (MQ=255)

                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  2:2144106/1‑93 (MQ=255)

                                                                            agaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc             <  1:6515654/93‑1 (MQ=255)

                                                                            agaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc             >  2:681252/1‑93 (MQ=255)

                                                                            agaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc             >  2:7677997/1‑93 (MQ=255)

                                                                             gaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCt            >  2:618044/1‑93 (MQ=255)

                                                                              aagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCtt           <  2:5309868/93‑1 (MQ=255)

                                                                               agTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa          <  1:5138233/93‑1 (MQ=255)

                                                                                   aGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg      <  2:2972962/93‑1 (MQ=255)

                                                                                    gCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAgg     >  2:319346/1‑93 (MQ=255)

                                                                                     cTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGc    <  1:4772195/93‑1 (MQ=255)

                                                                                      tGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc   >  2:2601520/1‑93 (MQ=255)

                                                                                      tGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc   >  1:376757/1‑93 (MQ=255)

                                                                                       gAGCGCTCACCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  <  2:2295849/93‑1 (MQ=255)

                                                                                       gAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  >  1:5060228/1‑93 (MQ=255)

                                                                                       gAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  <  1:7135543/93‑1 (MQ=255)

                                                                                       gAGCGCTCAACCGTAGGCCGGATAAGGCGGTAAAGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa  >  1:7748772/1‑93 (MQ=255)

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`