BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,673,594	T→C	Y74C (TAC→TGC)	yphC ←	putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,673,594	0	T	C	99.6%	754.9 / ‑5.2	240	Y74C (TAC→TGC)	yphC	putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (120/119); total (120/120)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.66e-01

Only 100 of 254 total aligned reads displayed.

AGCACGCGGTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGTATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCATT  >  NC_000913/2673504‑2673683

 gCACGCGGTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGcata                                                                                        >  2:7157821/1‑93 (MQ=255)

   aCGCGGTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAAc                                                                                      <  1:3642871/93‑1 (MQ=255)

    cgcgGTCGCCCGTTTTAAAAGGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTGCATGACCGTTGATAAAGCCCTGGTATAACg                                                                                     <  1:7434588/93‑1 (MQ=255)

     gcgGTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACgg                                                                                    <  2:5779047/93‑1 (MQ=255)

      cgGTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGt                                                                                   >  1:80271/1‑93 (MQ=255)

       ggTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGtt                                                                                  <  2:1325422/93‑1 (MQ=255)

         tCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTa                                                                                >  2:3509019/1‑93 (MQ=255)

         tCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTa                                                                                >  2:3754509/1‑93 (MQ=255)

         gcGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTa                                                                                <  1:6785307/92‑1 (MQ=255)

            cccTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCg                                                                             <  1:5663705/93‑1 (MQ=255)

            cccTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCg                                                                             >  1:2564444/1‑93 (MQ=255)

            cccTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATATGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCg                                                                             >  2:6441581/1‑93 (MQ=255)

             ccTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCgg                                                                            >  2:6704209/1‑93 (MQ=255)

             ccTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAACCCTGGCATAACGGTTTATCgg                                                                            >  2:331989/1‑93 (MQ=255)

              ctctTTAAAATGGCTGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCggg                                                                           <  1:1872843/93‑1 (MQ=255)

              ctctTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCtgg                                                                           >  1:2882845/1‑93 (MQ=255)

              ctctTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCggg                                                                           >  2:1609134/1‑93 (MQ=255)

              ctctTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCggg                                                                           >  1:3026364/1‑93 (MQ=255)

              ctctTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCggg                                                                           >  2:5014299/1‑93 (MQ=255)

               tctTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCgggg                                                                          >  2:2253146/1‑92 (MQ=255)

               cgtttAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGt                                                                          <  2:3740467/91‑1 (MQ=255)

                 tttAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTgc                                                                        >  2:7457131/1‑93 (MQ=255)

                       aTGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCcgccgc                                                                  <  2:7102571/93‑1 (MQ=255)

                       aTGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCcgccgc                                                                  >  2:6833838/1‑93 (MQ=255)

                          gcggcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCtgt                                                               <  1:4952823/93‑1 (MQ=255)

                          gcggcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCtgt                                                               <  2:4609509/93‑1 (MQ=255)

                          gcggcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCACtgt                                                               <  1:7660137/93‑1 (MQ=255)

                           cggcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACAGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCtgtg                                                              <  1:3697292/93‑1 (MQ=255)

                             gcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGc                                                            >  2:6948216/1‑93 (MQ=255)

                             gcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGc                                                            >  1:4834483/1‑93 (MQ=255)

                             gcAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGc                                                            >  1:2405562/1‑93 (MQ=255)

                                gCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACg                                                         >  1:272407/1‑93 (MQ=255)

                                 ccTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACgg                                                        <  1:2990540/93‑1 (MQ=255)

                                   ttGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGgtg                                                      >  2:2437548/1‑93 (MQ=255)

                                    tGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGgtgt                                                     >  2:1056672/1‑93 (MQ=255)

                                    tGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGgggt                                                     >  1:5846534/1‑93 (MQ=255)

                                      ccccATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTtg                                                   >  2:4649585/1‑93 (MQ=255)

                                       cccATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTtga                                                  <  2:5081370/93‑1 (MQ=255)

                                        ccATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTtgat                                                 <  2:5643513/93‑1 (MQ=255)

                                         cATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTtgatg                                                >  1:4864019/1‑93 (MQ=255)

                                         cATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTtgatg                                                >  1:3598675/1‑93 (MQ=255)

                                          ctCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCAGCTGTGGCACGGTGTtgatga                                               <  1:1352449/92‑1 (MQ=255)

                                           tCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTgatgat                                              >  1:2492139/1‑93 (MQ=255)

                                           tCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTgatgat                                              >  1:4147921/1‑93 (MQ=255)

                                           tCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTgatgat                                              >  1:1733041/1‑93 (MQ=255)

                                            cGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATgata                                             >  2:372222/1‑93 (MQ=255)

                                            cGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATgata                                             <  2:586875/93‑1 (MQ=255)

                                             gCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATgatag                                            >  1:6344805/1‑93 (MQ=255)

                                              ccACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATgataga                                           >  1:3732503/1‑93 (MQ=255)

                                               cacaATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATgatagat                                          >  1:6219316/1‑93 (MQ=255)

                                                 caATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGatat                                        <  2:1564123/93‑1 (MQ=255)

                                                 caATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGatat                                        >  2:7254958/1‑93 (MQ=255)

                                                 caATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGatat                                        <  1:4603810/93‑1 (MQ=255)

                                                  aaTCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGAtata                                       <  2:6595679/93‑1 (MQ=255)

                                                   aTCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAg                                      >  1:5715735/1‑93 (MQ=255)

                                                    acTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGt                                     <  2:6083711/92‑1 (MQ=255)

                                                     cTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTg                                    <  1:6904073/93‑1 (MQ=255)

                                                     cTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTg                                    <  2:3465289/93‑1 (MQ=255)

                                                      tGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTgg                                   >  2:6228095/1‑93 (MQ=255)

                                                        cccGCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGAc                                 <  1:1174897/93‑1 (MQ=255)

                                                           gCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATc                              <  2:4507157/93‑1 (MQ=255)

                                                           gCACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATc                              <  1:5389945/93‑1 (MQ=255)

                                                           acACGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATc                              >  1:2192948/2‑93 (MQ=255)

                                                             accgTTCATGGCCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGc                            <  1:207383/90‑1 (MQ=255)

                                                              cGGTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCt                           >  2:5443226/1‑93 (MQ=255)

                                                               ggTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCtt                          >  1:5882014/1‑93 (MQ=255)

                                                                gTTCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCCTc                         <  2:3988301/93‑1 (MQ=255)

                                                                 ttCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTcc                        <  1:1509165/93‑1 (MQ=255)

                                                                 ttCATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTcc                        >  1:1075557/1‑93 (MQ=255)

                                                                   cATGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGc                      <  2:4263954/93‑1 (MQ=255)

                                                                     tGACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGGGCCGCCGCTGTGGCACGGTGATGATGATAGATATAGTGGACATCGCTTCCTCaa                    >  2:7687056/1‑93 (MQ=255)

                                                                      gACCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCaaa                   <  1:4218565/93‑1 (MQ=255)

                                                                       aCCGTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAAt                  >  1:6137318/1‑93 (MQ=255)

                                                                          gTTGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATccc               <  1:133848/93‑1 (MQ=255)

                                                                           ttGATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCg              >  1:6548302/1‑93 (MQ=255)

                                                                             gATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCgga            <  2:80271/93‑1 (MQ=255)

                                                                             gATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCgga            >  2:904626/1‑93 (MQ=255)

                                                                             gATAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCgga            >  1:5297309/1‑93 (MQ=255)

                                                                              aTAAAGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCggag           <  1:3926399/93‑1 (MQ=255)

                                                                               tAAAGCCCTGGCATAACGGTTTATCGGGGGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCggagg          >  2:2724961/1‑93 (MQ=255)

                                                                                aaaGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCggagga         <  2:1908858/93‑1 (MQ=255)

                                                                                aaaGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCggagga         <  2:1729859/93‑1 (MQ=255)

                                                                                 aaGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGAt        <  1:7253805/93‑1 (MQ=255)

                                                                                  aGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGAtt       <  1:5481262/93‑1 (MQ=255)

                                                                                  aGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGAtt       >  1:624256/1‑93 (MQ=255)

                                                                                  aGCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGAtt       <  2:2190731/93‑1 (MQ=255)

                                                                                   gCCCTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGAttt      >  1:3230733/1‑93 (MQ=255)

                                                                                    cccTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTc     <  2:91474/93‑1 (MQ=255)

                                                                                    cccTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTc     <  1:3324954/93‑1 (MQ=255)

                                                                                     ccTGGCATAACGGTTTATCGGGTGCCGCTGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCa    <  1:6675993/93‑1 (MQ=255)

                                                                                     ccTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCa    <  2:2995296/93‑1 (MQ=255)

                                                                                     ccTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCa    <  1:1266670/93‑1 (MQ=255)

                                                                                      cTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAt   <  2:4136477/93‑1 (MQ=255)

                                                                                      cTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAt   >  1:7920092/1‑93 (MQ=255)

                                                                                      cTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAt   >  1:7538103/1‑93 (MQ=255)

                                                                                      cTGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAt   <  1:4683967/93‑1 (MQ=255)

                                                                                       tGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAtt  <  2:6535808/93‑1 (MQ=255)

                                                                                       tGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAtt  >  2:5362126/1‑93 (MQ=255)

                                                                                       tGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAtt  <  2:264933/93‑1 (MQ=255)

                                                                                       tGGCATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCAtt  >  2:7612938/1‑93 (MQ=255)

AGCACGCGGTCGCCCTCTTTAAAATGGCGGCAGCCTTGCCCCATCGCCACAATCTGCCCGCACGGTTCATGACCGTTGATAAAGCCCTGGTATAACGGTTTATCGGGTGCCGCCGCTGTGGCACGGTGTTGATGATAGATATAGTGGACATCGCTTCCGCAAATCCCGGAGGATTTCATT  >  NC_000913/2673504‑2673683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`