BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,746,200	T→C	S73S (AGT→AGC)	b2611 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,746,200	0	T	C	99.7%	899.3 / ‑5.5	282	S73S (AGT→AGC)	b2611	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (146/135); total (147/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 291 total aligned reads displayed.

CTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAA  >  NC_000913/2746110‑2746289

cTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGctt                                                                                         >  1:6243638/1‑93 (MQ=255)

 tGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtg                                                                                        >  2:4189561/1‑93 (MQ=255)

  gCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACCAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtga                                                                                       >  1:392621/1‑93 (MQ=255)

  gCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtga                                                                                       >  2:1182148/1‑93 (MQ=255)

   ccACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgat                                                                                      >  1:4312610/1‑93 (MQ=255)

   ccACGCAAGCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgat                                                                                      <  2:2822320/93‑1 (MQ=255)

    cACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatg                                                                                     >  1:722227/1‑93 (MQ=255)

    cACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatg                                                                                     >  1:450185/1‑93 (MQ=255)

     aCGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatga                                                                                    >  2:5373112/1‑93 (MQ=255)

     aCGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTtgatga                                                                                    >  2:5328200/1‑93 (MQ=255)

           tCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGGCAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTa                                                                              >  1:3636206/1‑93 (MQ=255)

           tCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTa                                                                              >  1:176858/1‑93 (MQ=255)

            cGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTAc                                                                             <  2:4109481/93‑1 (MQ=255)

              ctctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACgg                                                                           <  1:5975483/93‑1 (MQ=255)

              ctctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACgg                                                                           <  2:1332968/93‑1 (MQ=255)

              ctctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACgg                                                                           <  2:4632546/93‑1 (MQ=255)

              ctctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACgg                                                                           >  2:4281462/1‑93 (MQ=255)

                ctGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTa                                                                         <  2:5888148/93‑1 (MQ=255)

                 tGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTaa                                                                        >  2:2107853/1‑93 (MQ=255)

                 tGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTaa                                                                        >  1:253065/1‑93 (MQ=255)

                 cggAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTaa                                                                        <  2:3989622/92‑1 (MQ=255)

                    aaGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGa                                                                     <  2:3791480/93‑1 (MQ=255)

                    aaGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGa                                                                     <  2:1917991/93‑1 (MQ=255)

                     aGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGAc                                                                    <  1:2780755/93‑1 (MQ=255)

                      gCCCGCATCCTGCCCGACGGTGATTGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGAcc                                                                   >  2:3097746/1‑93 (MQ=255)

                       cccGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCa                                                                  >  2:7501592/1‑93 (MQ=255)

                        ccGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAt                                                                 >  1:7661176/1‑93 (MQ=255)

                         cGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAtt                                                                >  2:1517069/1‑93 (MQ=255)

                         cGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCAtt                                                                >  1:7099524/1‑93 (MQ=255)

                          gCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATtg                                                               <  1:7243712/93‑1 (MQ=255)

                           cATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATtgt                                                              <  2:1345264/93‑1 (MQ=255)

                           cATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATtgt                                                              >  2:2280188/1‑93 (MQ=255)

                             tCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTgg                                                            >  2:2608611/1‑93 (MQ=255)

                               cTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCt                                                          <  1:5001683/93‑1 (MQ=255)

                                 gCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTtc                                                        >  1:3316859/1‑93 (MQ=255)

                                   ccGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTtctc                                                      <  2:8253/93‑1 (MQ=255)

                                    cGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCg                                                     >  1:7877585/1‑93 (MQ=255)

                                    cGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCg                                                     >  1:573594/1‑93 (MQ=255)

                                         gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                >  1:6347139/1‑93 (MQ=255)

                                         gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                <  1:6604220/93‑1 (MQ=255)

                                         gTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATc                                                >  1:1698310/1‑93 (MQ=255)

                                          tGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCg                                               >  2:7902538/1‑93 (MQ=255)

                                           gATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGt                                              <  1:1964669/93‑1 (MQ=255)

                                              aGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggc                                           <  1:6100895/93‑1 (MQ=255)

                                               gCGGACAAAACCTCATCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggct                                          <  2:5014348/93‑1 (MQ=255)

                                               gCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggct                                          >  1:1204608/1‑93 (MQ=255)

                                                 ggACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggctgg                                        <  2:573518/93‑1 (MQ=255)

                                                  gACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGtggctggc                                       <  1:1837421/93‑1 (MQ=255)

                                                    cAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGgctggctg                                     >  2:7098809/1‑93 (MQ=255)

                                                     aaaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgc                                    >  2:6744886/1‑93 (MQ=255)

                                                     aaaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgc                                    >  1:2221105/1‑93 (MQ=255)

                                                      aaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgct                                   >  2:3293979/1‑93 (MQ=255)

                                                      aaaCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgct                                   >  2:2889505/1‑93 (MQ=255)

                                                        aCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgctgc                                 <  1:5134905/93‑1 (MQ=255)

                                                        aCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgctgc                                 <  2:1017145/93‑1 (MQ=255)

                                                        aCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgctgc                                 <  1:7405513/93‑1 (MQ=255)

                                                        aCCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgctgc                                 >  2:2990495/1‑93 (MQ=255)

                                                         ccTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGgctgctgct                                >  1:1072544/1‑93 (MQ=255)

                                                          cTCAGCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTa                               >  2:2501139/1‑93 (MQ=255)

                                                              gCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAGTCGTGGCTGGCTGCTGCTACCCa                           >  2:4295868/1‑93 (MQ=255)

                                                              gCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCa                           >  2:608871/1‑93 (MQ=255)

                                                              gCCTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCa                           <  1:3863654/93‑1 (MQ=255)

                                                               ccTGCTGAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAt                          <  1:2851136/93‑1 (MQ=255)

                                                                ctgctgCACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAtt                         <  1:683513/93‑1 (MQ=255)

                                                                ctgctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAtt                         <  2:529448/93‑1 (MQ=255)

                                                                ctgctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCAtt                         >  1:5667142/1‑93 (MQ=255)

                                                                 tgctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTg                        >  2:3633409/1‑93 (MQ=255)

                                                                 tgctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTg                        <  2:5164593/93‑1 (MQ=255)

                                                                  gctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGt                       >  1:7202043/1‑93 (MQ=255)

                                                                  gctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGt                       <  1:5326790/93‑1 (MQ=255)

                                                                  gctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACACACTGt                       >  1:1552366/1‑93 (MQ=255)

                                                                   ctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTc                      <  1:308983/93‑1 (MQ=255)

                                                                   ctgAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTc                      <  1:6452696/93‑1 (MQ=255)

                                                                     gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  2:7623083/93‑1 (MQ=255)

                                                                     gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    >  2:172500/1‑93 (MQ=255)

                                                                     gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  2:3876439/93‑1 (MQ=255)

                                                                     gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  1:4824840/93‑1 (MQ=255)

                                                                     gAACGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTa                    <  1:3739647/93‑1 (MQ=255)

                                                                       aCGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATg                  >  2:6427697/1‑93 (MQ=255)

                                                                       aCGTTGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATg                  <  1:5400621/93‑1 (MQ=255)

                                                                          ttGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCt               >  1:1418701/1‑93 (MQ=255)

                                                                          ttGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCt               >  1:4384301/1‑93 (MQ=255)

                                                                           tGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCtt              <  1:1047199/93‑1 (MQ=255)

                                                                           tGGTTCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCtt              >  1:5146574/1‑93 (MQ=255)

                                                                              ttCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTTGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgc           >  2:2464159/1‑93 (MQ=255)

                                                                              ttCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATTCCTTTgc           >  1:7006838/1‑93 (MQ=255)

                                                                              ttCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgc           <  2:2757124/93‑1 (MQ=255)

                                                                               tCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgcg          <  1:1478489/93‑1 (MQ=255)

                                                                               tCATTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTgcg          >  2:6574084/1‑93 (MQ=255)

                                                                                 aTTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCt        >  1:7771681/1‑93 (MQ=255)

                                                                                 aTTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCt        <  2:1585246/93‑1 (MQ=255)

                                                                                 aTTGGTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCt        >  1:4723996/1‑93 (MQ=255)

                                                                                     gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    >  1:5852476/1‑93 (MQ=255)

                                                                                     gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    <  2:6272512/93‑1 (MQ=255)

                                                                                     gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    <  2:5552364/93‑1 (MQ=255)

                                                                                     gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    <  1:2145693/93‑1 (MQ=255)

                                                                                     gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    <  2:6887137/93‑1 (MQ=255)

                                                                                     gTCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATc    >  1:3483182/1‑93 (MQ=255)

                                                                                      tCAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCa   <  1:7584120/93‑1 (MQ=255)

                                                                                       cAGCTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCaa  >  1:4648406/1‑93 (MQ=255)

CTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAA  >  NC_000913/2746110‑2746289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`