| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,753,655 | T→C | intergenic (+256/‑525) | smpB → / → intA | small protein B/prophage CP4‑57 integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,753,655 | 0 | T | C | 99.7% | 968.4 / ‑5.6 | 308 | intergenic (+256/‑525) | smpB/intA | small protein B/prophage CP4‑57 integrase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (138/169); total (139/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 311 total aligned reads displayed.
AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT > NC_000913/2753566‑2753744 | aGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa < 2:2952443/93‑1 (MQ=255) ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAt < 1:6871973/93‑1 (MQ=255) ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAt > 2:6681448/1‑93 (MQ=255) gtGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGc < 1:3122451/92‑1 (MQ=255) ggTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCg > 2:4581837/1‑93 (MQ=255) ggTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCg > 2:5580334/1‑93 (MQ=255) gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa < 1:4459998/93‑1 (MQ=255) gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa < 1:2352532/93‑1 (MQ=255) gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa < 2:6186735/93‑1 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGAGGGGATTTGCGAAACCCAAGGCGCATGCCGAg > 1:2723374/1‑93 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg < 1:1474116/93‑1 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg < 2:69396/93‑1 (MQ=255) aTGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACTCAAGGCGCATGCCGAggg < 1:1219631/93‑1 (MQ=255) tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg < 1:4752711/93‑1 (MQ=255) tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg > 1:3345833/1‑93 (MQ=255) ggCGCTCATAAATCTGGTATACTTACCTTTACGCATTGGGGCTGACTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGc < 1:4022613/93‑1 (MQ=255) ggCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGc < 2:153675/93‑1 (MQ=255) gcgcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCg < 2:2367616/93‑1 (MQ=255) gcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGt < 1:3250657/93‑1 (MQ=255) gcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGt < 1:2440471/93‑1 (MQ=255) tCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTg > 1:4359320/1‑93 (MQ=255) tcaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGcc < 1:6148833/91‑1 (MQ=255) aaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCt > 2:2438180/1‑93 (MQ=255) aaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTc > 1:3906687/1‑93 (MQ=255) tCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGt > 1:7391615/1‑93 (MQ=255) cTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTa < 2:6523521/93‑1 (MQ=255) tGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaa > 2:757408/1‑93 (MQ=255) ggTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaa > 1:889118/1‑93 (MQ=255) gTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaaa < 2:4156308/93‑1 (MQ=255) gTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaaa < 1:4850826/93‑1 (MQ=255) tataCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaaaa < 1:2263026/93‑1 (MQ=255) ataCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAg < 2:5937168/93‑1 (MQ=255) taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc < 1:6532958/93‑1 (MQ=255) taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc > 1:4287464/1‑93 (MQ=255) taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc > 2:3295008/1‑93 (MQ=255) aCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGcc < 1:2809764/93‑1 (MQ=255) aCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGcc < 1:2556552/93‑1 (MQ=255) cTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCg < 2:1739907/93‑1 (MQ=255) ttACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGc > 2:373158/1‑93 (MQ=255) ttACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGc < 1:2936811/93‑1 (MQ=255) ccTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaa > 2:3624479/1‑93 (MQ=255) ccTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaa < 1:5790043/93‑1 (MQ=255) cTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaa < 1:1643266/93‑1 (MQ=255) tttACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaa > 2:1637524/1‑93 (MQ=255) tttACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaa > 2:6267543/1‑93 (MQ=255) tttACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaa < 2:7137652/93‑1 (MQ=255) tttACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaa < 1:6939745/93‑1 (MQ=255) acacATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa < 1:7898040/93‑1 (MQ=255) acaTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAgg < 2:4841475/93‑2 (MQ=255) acaTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGt > 2:111638/1‑93 (MQ=255) caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc < 1:7126115/93‑1 (MQ=255) caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc > 2:3856938/1‑93 (MQ=255) aTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCg > 2:438944/1‑93 (MQ=255) ttGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGc < 2:7862906/93‑1 (MQ=255) ttGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGc > 1:4934276/1‑93 (MQ=255) tGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCa > 2:1444080/1‑93 (MQ=255) gggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaaa < 1:5381238/93‑1 (MQ=255) ggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAac > 2:5023521/1‑93 (MQ=255) gccTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAac < 2:5440158/91‑1 (MQ=255) cTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacga < 2:442959/93‑1 (MQ=255) tGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacgac < 2:52555/93‑1 (MQ=255) gATTCTGGATTCGACGGGATTTTCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGTCGCAAAAAATAGTCGCAAatgacg > 1:1832733/1‑93 (MQ=255) gATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacgacg > 1:5824165/1‑93 (MQ=255) gATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacgacg < 1:130769/93‑1 (MQ=255) gATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAacgaca > 1:4813494/1‑92 (MQ=255) tCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaa > 1:5573264/1‑93 (MQ=255) cTGGATTCGACGGGATTTGCGAAACCCAGGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa < 2:7050034/93‑1 (MQ=255) cTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa > 2:4274062/1‑93 (MQ=255) cTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGACCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa < 1:3595757/93‑1 (MQ=255) ggATTCGACGGGATTTGCGAAACCCAAGGCCCATGCCGAGGGGCGGGTGGCCTCGTAAAAAGCCGCCAAAAATAGGAGCAAACGACGAAAACt > 2:1819160/1‑93 (MQ=255) gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa < 2:7263071/93‑1 (MQ=255) gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa < 1:2126651/93‑1 (MQ=255) gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa < 1:5023990/93‑1 (MQ=255) aTTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAc < 2:4715529/93‑1 (MQ=255) tCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGc < 2:2577345/93‑1 (MQ=255) gACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCtt > 2:6802172/1‑93 (MQ=255) aCGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCttt > 2:4478728/1‑93 (MQ=255) gggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTag < 1:3205402/93‑1 (MQ=255) gggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACAACGAAAACTACGCTTTag > 1:2382691/1‑93 (MQ=255) ggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagc > 1:3174900/1‑93 (MQ=255) ggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagc < 1:5713026/93‑1 (MQ=255) aTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcag < 2:6442967/93‑1 (MQ=255) aTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcag > 2:3959201/1‑93 (MQ=255) tttGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcagc < 1:4805492/93‑1 (MQ=255) tttGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcagc < 2:1042681/93‑1 (MQ=255) tttGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcagc > 2:1198980/1‑93 (MQ=255) cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa < 1:5980881/93‑1 (MQ=255) cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa < 2:5659313/93‑1 (MQ=255) cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa < 1:4607165/93‑1 (MQ=255) cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa < 1:6521705/93‑1 (MQ=255) cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa < 2:1955384/93‑1 (MQ=255) gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat < 1:102727/93‑1 (MQ=255) gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat < 2:3135986/93‑1 (MQ=255) aaaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaata > 1:6613430/1‑93 (MQ=255) aCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAc > 1:3532139/1‑93 (MQ=255) aCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAc < 2:5113102/93‑1 (MQ=255) cAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTg > 2:4222249/1‑93 (MQ=255) aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGc < 1:5134559/93‑1 (MQ=255) aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGc > 2:7529300/1‑93 (MQ=255) aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACAAAAACTACGCTTTAGCAGCTTAATAACCTGc < 1:5281787/93‑1 (MQ=255) | AGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT > NC_000913/2753566‑2753744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |