BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,794,501	A→G	S103P (TCT→CCT)	ygaU ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,794,501	0	A	G	100.0%	867.9 / NA	272	S103P (TCT→CCT)	ygaU	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (170/102); total (170/102)

Only 100 of 277 total aligned reads displayed.

TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACC  >  NC_000913/2794411‑2794589

  aGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTa                                                                                      <  2:891127/93‑1 (MQ=255)

  aGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTa                                                                                      <  2:6897442/93‑1 (MQ=255)

  aGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTa                                                                                      >  2:3273045/1‑93 (MQ=255)

  aGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTa                                                                                      >  1:3079208/1‑93 (MQ=255)

      tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg                                                                                  <  1:2727134/93‑1 (MQ=255)

       cGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGt                                                                                 >  2:2960453/1‑93 (MQ=255)

        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                >  1:7679567/1‑93 (MQ=255)

         gTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGtat                                                                               >  1:4943852/1‑93 (MQ=255)

             aTTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaaa                                                                           <  1:3448/93‑1 (MQ=255)

               tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct                                                                         >  1:4053463/1‑93 (MQ=255)

                cGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActg                                                                        >  2:3083707/1‑93 (MQ=255)

                cGCTTCGAAGATTTTATTGTACAGATTAGCGTGACCGGCGACCTGTGTGGAAATGGCACTCATAGGGTCGCCAGCCTTAACTGTATAAAActg                                                                        >  2:2578989/1‑93 (MQ=255)

                  cTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggc                                                                      >  1:805708/1‑93 (MQ=255)

                  cTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggc                                                                      >  1:7358147/1‑93 (MQ=255)

                   ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggct                                                                     >  2:2081627/1‑93 (MQ=255)

                   ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggct                                                                     >  2:7305510/1‑93 (MQ=255)

                    tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg                                                                    >  1:1917522/1‑93 (MQ=255)

                    tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggcgg                                                                    >  1:125221/1‑91 (MQ=255)

                     cGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctgg                                                                   >  2:2432457/1‑93 (MQ=255)

                         gATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGt                                                               >  2:5554377/1‑93 (MQ=255)

                         gATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGt                                                               <  2:1026264/93‑1 (MQ=255)

                          aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg                                                              >  1:870534/1‑93 (MQ=255)

                          aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg                                                              <  1:3659705/93‑1 (MQ=255)

                          aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg                                                              <  1:6667631/93‑1 (MQ=255)

                          aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg                                                              >  1:2477131/1‑93 (MQ=255)

                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                             >  2:1368352/1‑93 (MQ=255)

                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                             >  1:586711/1‑93 (MQ=255)

                            tttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGc                                                            >  2:1117360/1‑93 (MQ=255)

                              tATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTg                                                          <  2:7202338/93‑1 (MQ=255)

                              tATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTg                                                          <  2:6843903/93‑1 (MQ=255)

                               aTTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTgg                                                         >  1:7307488/1‑93 (MQ=255)

                                ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTggg                                                        >  2:1435181/1‑92 (MQ=255)

                                ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTggg                                                        >  2:4237731/1‑92 (MQ=255)

                                ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTggg                                                        >  2:5184844/1‑92 (MQ=255)

                                ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgt                                                        >  1:3859836/1‑93 (MQ=255)

                                 tGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtg                                                       <  2:2882357/93‑1 (MQ=255)

                                 tGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtg                                                       <  2:4082418/93‑1 (MQ=255)

                                  gTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtgt                                                      <  1:1177160/93‑1 (MQ=255)

                                   tACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTc                                                     >  2:5067619/1‑93 (MQ=255)

                                    aCAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCg                                                    <  1:3958676/93‑1 (MQ=255)

                                      aGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGCGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGCCggc                                                  >  2:652422/1‑91 (MQ=255)

                                       gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                 >  1:3911708/1‑93 (MQ=255)

                                       gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                 >  2:1175957/1‑93 (MQ=255)

                                       gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                 >  1:942926/1‑93 (MQ=255)

                                        aTTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGGCGt                                                >  1:439683/1‑93 (MQ=255)

                                         ttAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCggt                                               >  2:482533/1‑91 (MQ=255)

                                         ttAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGtt                                               >  1:6213095/1‑93 (MQ=255)

                                          tAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGttt                                              >  1:5228539/1‑93 (MQ=255)

                                           aGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGtttt                                             <  2:3682603/93‑1 (MQ=255)

                                            gCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTc                                            >  2:3744853/1‑93 (MQ=255)

                                            gCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTTGGCGgttta                                            >  1:5883672/1‑92 (MQ=255)

                                             cGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGGCGTTTTct                                           >  2:7095787/1‑92 (MQ=255)

                                               ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAcc                                         >  1:798255/1‑93 (MQ=255)

                                               ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAcc                                         <  2:6995138/93‑1 (MQ=255)

                                               ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAcc                                         >  1:4284561/1‑93 (MQ=255)

                                                tACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt                                        <  2:5149613/93‑1 (MQ=255)

                                                  ccGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGa                                      >  2:630644/1‑93 (MQ=255)

                                                  ccGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGGTTTCACCTGa                                      >  1:188365/1‑93 (MQ=255)

                                                    gTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatc                                    <  2:5916826/93‑1 (MQ=255)

                                                    gTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatc                                    <  2:44851/93‑1 (MQ=255)

                                                    gTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatc                                    >  1:2524743/1‑93 (MQ=255)

                                                     tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca                                   >  1:6698812/1‑93 (MQ=255)

                                                     gaGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatca                                   <  2:3978835/92‑1 (MQ=255)

                                                      aGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTcatcat                                  >  2:639914/1‑93 (MQ=255)

                                                      aGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatcat                                  <  2:1756445/93‑1 (MQ=255)

                                                      aGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatcat                                  >  1:7011040/1‑93 (MQ=255)

                                                        aCCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGGTTTCACCTGATCATCg                                >  1:6365275/1‑93 (MQ=255)

                                                        aCCTGTTTGGAAATGGCACTCAGAGCGTCGCCAGGCTTAACGGTATAAACCTGGCTGGCAGTGGCTGGTGTACCCGTTTTCACATGAtcgtcg                                >  1:5543380/1‑93 (MQ=255)

                                                          cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGac                              >  2:7427265/1‑93 (MQ=255)

                                                          cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGac                              >  2:7728148/1‑93 (MQ=255)

                                                           tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTTACCTGATTATCGaca                             >  2:3353341/1‑93 (MQ=255)

                                                            gTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGacac                            >  2:3513859/1‑93 (MQ=255)

                                                            gTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGacac                            <  2:6225461/93‑1 (MQ=255)

                                                              ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg                          >  2:5824204/1‑93 (MQ=255)

                                                              ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg                          <  1:1564819/93‑1 (MQ=255)

                                                              ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg                          <  2:2288895/93‑1 (MQ=255)

                                                              ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg                          >  1:7813922/1‑93 (MQ=255)

                                                                 gAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCa                       >  2:6052378/1‑93 (MQ=255)

                                                                   aaTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAAt                     <  1:5047163/93‑1 (MQ=255)

                                                                    aTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCACTa                    >  1:2092736/1‑93 (MQ=255)

                                                                    aTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATa                    >  2:5389140/1‑93 (MQ=255)

                                                                     tGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc                   <  2:7777985/93‑1 (MQ=255)

                                                                     tGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc                   >  1:7111484/1‑93 (MQ=255)

                                                                      ggCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAcc                  <  1:3193378/93‑1 (MQ=255)

                                                                       gCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCg                 <  1:2355704/93‑1 (MQ=255)

                                                                         aCTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGGTTTCACCTGATCATCGACACTGGCAATACCGGa               >  1:505435/1‑93 (MQ=255)

                                                                          cTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCggga              >  2:1689060/1‑91 (MQ=255)

                                                                          cTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaa              >  1:4671844/1‑93 (MQ=255)

                                                                           tCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaaa             <  1:1815473/93‑1 (MQ=255)

                                                                           tCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaaa             <  1:7638571/93‑1 (MQ=255)

                                                                            cAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGAAACTGGCAATACCGGaaaa            >  2:2353360/1‑92 (MQ=255)

                                                                             agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata           <  2:1656345/93‑1 (MQ=255)

                                                                             agagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAata           <  1:2984573/93‑1 (MQ=255)

                                                                                gtgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTc        >  2:5010307/1‑93 (MQ=255)

                                                                                  gtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGGAATACCGGAAATATTccc      >  2:5170203/1‑93 (MQ=255)

                                                                                   tCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc     <  2:7534654/93‑1 (MQ=255)

                                                                                   tCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc     >  1:3132861/1‑93 (MQ=255)

                                                                                    cGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCa    <  2:4754400/93‑1 (MQ=255)

                                                                                     gCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGTAATACCGGAAATATTTCCCAc   >  2:4879888/1‑93 (MQ=255)

                                                                                      ccAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAcc  <  1:2826815/93‑1 (MQ=255)

TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACC  >  NC_000913/2794411‑2794589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`