BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,851,044	A→G	T296A (ACG→GCG)	hypD →	HypD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,851,044	0	A	G	99.6%	820.6 / ‑6.1	265	T296A (ACG→GCG)	hypD	HypD
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (135/129); total (135/130)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 276 total aligned reads displayed.

CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAG  >  NC_000913/2850955‑2851133

cgcAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGgcgc                                                                                        <  2:4515794/93‑1 (MQ=255)

   aaCAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCgg                                                                                     >  1:4145511/1‑93 (MQ=255)

    aCAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGa                                                                                    <  2:3601847/93‑1 (MQ=255)

      aGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGAtt                                                                                  >  2:6053780/1‑93 (MQ=255)

      aGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGAtt                                                                                  >  1:5614572/1‑93 (MQ=255)

       ggCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTa                                                                                 <  2:1503803/93‑1 (MQ=255)

        gCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTAt                                                                                <  2:6032564/93‑1 (MQ=255)

         cGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATc                                                                               <  1:1041510/93‑1 (MQ=255)

         cGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATc                                                                               <  2:839278/93‑1 (MQ=255)

          gATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCa                                                                              <  1:5115195/93‑1 (MQ=255)

          gATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCa                                                                              <  2:3488493/93‑1 (MQ=255)

          gATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCa                                                                              >  2:2157702/1‑93 (MQ=255)

          gATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCa                                                                              >  2:2335037/1‑93 (MQ=255)

           aTTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCaa                                                                             <  1:7195883/93‑1 (MQ=255)

            ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc                                                                            <  2:1320966/93‑1 (MQ=255)

            ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc                                                                            <  2:1598838/93‑1 (MQ=255)

            ttGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAAc                                                                            <  2:5637407/93‑1 (MQ=255)

             tGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACg                                                                           <  2:2619135/93‑1 (MQ=255)

              gCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGa                                                                          <  1:3996293/93‑1 (MQ=255)

              gCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGa                                                                          <  1:4750975/93‑1 (MQ=255)

               ccGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGAt                                                                         >  1:7585500/1‑93 (MQ=255)

                 gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc                                                                       >  1:4471522/1‑93 (MQ=255)

                 gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc                                                                       >  2:5388595/1‑93 (MQ=255)

                 gATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTc                                                                       <  1:1015207/93‑1 (MQ=255)

                  aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg                                                                      >  1:3488879/1‑93 (MQ=255)

                  aTGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACATGGCGCCGGATTATCCACGATTcc                                                                      >  1:694823/1‑92 (MQ=255)

                  aTGCGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGCGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCg                                                                      >  2:2428930/1‑93 (MQ=255)

                   tgtgTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGa                                                                     >  1:7336656/1‑93 (MQ=255)

                   tgtgTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGa                                                                     >  1:5809190/1‑93 (MQ=255)

                   tgtgTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGa                                                                     >  1:4655532/1‑93 (MQ=255)

                    gtgtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGAt                                                                    <  2:2775863/93‑1 (MQ=255)

                      gtTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGc                                                                  <  2:4199449/93‑1 (MQ=255)

                       ttCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGcc                                                                 <  1:3370804/93‑1 (MQ=255)

                        tCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCg                                                                >  2:7202610/1‑93 (MQ=255)

                         cTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGa                                                               <  1:3681505/93‑1 (MQ=255)

                          tgtgTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGaa                                                              >  1:4228898/1‑93 (MQ=255)

                           gtgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg                                                             >  2:7424344/1‑93 (MQ=255)

                           atgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAg                                                             >  1:4590330/2‑93 (MQ=255)

                            tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc                                                            >  1:4075114/1‑93 (MQ=255)

                            tgtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGc                                                            <  1:2767429/93‑1 (MQ=255)

                             gtCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGca                                                           >  1:4837326/1‑93 (MQ=255)

                              tCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGcac                                                          <  1:5833394/93‑1 (MQ=255)

                                 aCGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAtt                                                       <  2:3546158/93‑1 (MQ=255)

                                 aCGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAtt                                                       >  2:3782142/1‑93 (MQ=255)

                                  cGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAttt                                                      >  2:3226554/1‑93 (MQ=255)

                                  cGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAttt                                                      <  2:7597544/93‑1 (MQ=255)

                                  cGGCGACAACGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAttt                                                      >  2:6355334/1‑93 (MQ=255)

                                   ggCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTc                                                     <  1:4303977/93‑1 (MQ=255)

                                   ggCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTc                                                     <  2:4388690/93‑1 (MQ=255)

                                       aCAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGcc                                                 >  2:5032724/1‑93 (MQ=255)

                                          gCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCgg                                              <  1:6851428/93‑1 (MQ=255)

                                          gCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCgg                                              <  2:1357139/93‑1 (MQ=255)

                                           cGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGc                                             <  1:268287/93‑1 (MQ=255)

                                            gAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCa                                            <  2:5227479/93‑1 (MQ=255)

                                                 gcgcGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgca                                       <  1:3951890/93‑1 (MQ=255)

                                                 gcgcGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCAGCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgca                                       <  1:5550035/93‑1 (MQ=255)

                                                  cgcgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcag                                      >  1:2151762/1‑93 (MQ=255)

                                                    cgGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCgcagca                                    <  2:3866168/93‑1 (MQ=255)

                                                     ggCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGcagcag                                   <  2:6430958/93‑1 (MQ=255)

                                                     ggCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGcagcag                                   <  2:1989439/93‑1 (MQ=255)

                                                      gCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAgg                                  >  1:2883931/1‑93 (MQ=255)

                                                        ttAGGCGTGATTGATTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACAATTCCGCCCGGCACCGCAGCAGGTc                                <  1:6526118/93‑1 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc                                <  1:1323272/93‑1 (MQ=255)

                                                        ttAGGCGTGATTGAATCTTCTGGCCGGCACCTGGCCCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTc                                <  1:6110195/93‑1 (MQ=255)

                                                         tAGGCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCt                               <  1:5751061/93‑1 (MQ=255)

                                                           ggCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGc                             <  2:669980/93‑1 (MQ=255)

                                                            gCGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCg                            >  2:4016164/1‑93 (MQ=255)

                                                             cGTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGa                           <  1:5196040/93‑1 (MQ=255)

                                                              gTGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGAt                          <  1:6033993/93‑1 (MQ=255)

                                                               tGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATg                         <  1:2021718/93‑1 (MQ=255)

                                                               tGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATg                         >  2:4772263/1‑93 (MQ=255)

                                                               tGATTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATg                         >  2:7052552/1‑93 (MQ=255)

                                                                 aTTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAc                       >  2:2884390/1‑93 (MQ=255)

                                                                 aTTGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAc                       >  1:1457566/1‑93 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGGGATGAcc                      >  1:7057670/1‑93 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc                      >  2:614945/1‑93 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc                      >  1:2972340/1‑93 (MQ=255)

                                                                  ttGAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGAcc                      >  1:1692964/1‑93 (MQ=255)

                                                                   tGAATCTCTGGGCGGGCACCTAGCGCCGGATTACCAACAATTCGATGCCGGAGCGCATTTCCGCCCCGCACCGCAGCAGGTCTGCCATGAccc                     <  2:6811954/93‑1 (MQ=255)

                                                                    gAATCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcg                    <  1:916186/93‑1 (MQ=255)

                                                                      aTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcg                  <  1:6281554/93‑1 (MQ=255)

                                                                      aTCTTCTGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcg                  >  1:6322390/1‑93 (MQ=255)

                                                                       tcttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgc                 >  1:5692568/1‑93 (MQ=255)

                                                                       tcttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGACTGCGATAACCcgagc                 >  1:1396658/1‑93 (MQ=255)

                                                                         ttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgc               >  2:5218229/1‑93 (MQ=255)

                                                                         ttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgc               >  2:3007791/1‑93 (MQ=255)

                                                                         ttctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgc               <  1:7248323/93‑1 (MQ=255)

                                                                         ttctGGCGTGCACCTGGCCCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgc               <  2:6502385/93‑1 (MQ=255)

                                                                           ctGGCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgcgc             >  1:2820865/1‑93 (MQ=255)

                                                                           ctGGCGGGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCcgcgcgcgc             <  1:5543755/93‑1 (MQ=255)

                                                                              gCGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGtt          <  1:5911963/93‑1 (MQ=255)

                                                                               cGTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTtg         >  2:3362783/1‑93 (MQ=255)

                                                                                gTGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTtgt        >  2:508948/1‑93 (MQ=255)

                                                                                 tGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCTCGCGTtgtg       <  2:3942976/93‑1 (MQ=255)

                                                                                 tGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTtgtg       <  1:7671222/93‑1 (MQ=255)

                                                                                 tGCACCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTtgtg       >  1:1230587/1‑93 (MQ=255)

                                                                                    cccTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggtg    <  1:5245412/92‑1 (MQ=255)

                                                                                    aCCTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTgtggtg    >  1:2250318/1‑93 (MQ=255)

                                                                                     ccTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGa   >  1:6623862/1‑93 (MQ=255)

                                                                                      cTGGCGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAg  >  1:6798462/1‑93 (MQ=255)

CGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAG  >  NC_000913/2850955‑2851133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`