Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,868,544 T→C S262G (AGT→GGT)  ygbO ← putative hydrogenase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,868,5440TC99.4% 1118.5 / ‑5.6 358S262G (AGT→GGT) ygbOputative hydrogenase subunit
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (174/182);  total (175/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 366 total aligned reads displayed.

CGCGCACCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACTGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCAGC  >  NC_000913/2868454‑2868633
                                                                                          |                                                                                         
cgcgCACCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGc                                                                                         <  1:2972158/93‑1 (MQ=255)
cgccCACCAGTAAAGCTTGAAATTCAGCTTCTGCGACGACAGCTGCTTTTTCTATTGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGc                                                                                         >  2:1300748/1‑93 (MQ=255)
  cgcACCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCt                                                                                       <  1:6589018/93‑1 (MQ=255)
   gcACCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTg                                                                                      >  2:3826972/1‑93 (MQ=255)
    cACCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTgg                                                                                     <  2:7062099/93‑1 (MQ=255)
     aCCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGc                                                                                    <  1:872707/93‑1 (MQ=255)
     aCCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGc                                                                                    <  2:666791/93‑1 (MQ=255)
      ccAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCa                                                                                   >  2:6245048/1‑93 (MQ=255)
       cAGTAAATCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCaa                                                                                  <  2:5916631/93‑1 (MQ=255)
       cAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCaa                                                                                  <  2:6531360/93‑1 (MQ=255)
       cAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCaa                                                                                  <  1:344142/93‑1 (MQ=255)
       cAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCAATCGCCACCGCCTGGCaa                                                                                  <  1:3464393/93‑1 (MQ=255)
        aGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAAt                                                                                 <  1:3321164/93‑1 (MQ=255)
        aGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTAGCAAt                                                                                 >  2:4203809/1‑93 (MQ=255)
         gTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATg                                                                                <  1:1111872/93‑1 (MQ=255)
          tacaGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgc                                                                               <  1:276366/90‑1 (MQ=255)
          tAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgc                                                                               >  2:5252226/1‑93 (MQ=255)
          tAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgc                                                                               <  1:3921013/93‑1 (MQ=255)
            aaGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgcgg                                                                             <  1:7288170/93‑1 (MQ=255)
            aaGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgcgg                                                                             >  1:7118565/1‑93 (MQ=255)
             aGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgcggc                                                                            >  2:3307901/1‑93 (MQ=255)
              gCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATgcggcg                                                                           >  1:7931574/1‑93 (MQ=255)
                ttGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGt                                                                         >  1:3880556/1‑93 (MQ=255)
                 tGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGtt                                                                        >  1:2389698/1‑93 (MQ=255)
                  gTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTa                                                                       <  1:2666946/93‑1 (MQ=255)
                     aTTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTatca                                                                    <  1:5776694/93‑1 (MQ=255)
                     aTTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTatca                                                                    <  1:5831450/93‑1 (MQ=255)
                      ttCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTatcat                                                                   >  1:3716291/1‑93 (MQ=255)
                      ttCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTatcat                                                                   >  2:4766798/1‑93 (MQ=255)
                       tCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGGTatcatc                                                                  >  2:7148703/1‑93 (MQ=255)
                        cAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTAtcatca                                                                 >  1:716482/1‑93 (MQ=255)
                         aGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCaa                                                                >  1:3079130/1‑93 (MQ=255)
                          gTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAAc                                                               >  1:1464624/1‑93 (MQ=255)
                           tttCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAAct                                                              >  2:1354053/1‑93 (MQ=255)
                           tttCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAAct                                                              >  2:2208962/1‑93 (MQ=255)
                            ttCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAActc                                                             <  1:7564576/93‑1 (MQ=255)
                            ttCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAActc                                                             <  1:9342/93‑1 (MQ=255)
                            ttCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAActc                                                             >  1:6243711/1‑93 (MQ=255)
                              cTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCtt                                                           <  2:2958695/93‑1 (MQ=255)
                              cTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCtt                                                           >  2:3430364/1‑93 (MQ=255)
                               tGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCttt                                                          >  1:7747813/1‑93 (MQ=255)
                                gcggcgACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTa                                                         <  1:7428349/93‑1 (MQ=255)
                                  ggcgACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCGACCGCCTGGCGATGCGGCGGTTATCATCAACTCTTTaag                                                       >  1:1053256/1‑91 (MQ=255)
                                  ggcgACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATc                                                       <  2:3958335/93‑1 (MQ=255)
                                   gcgACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCg                                                      >  1:473227/1‑93 (MQ=255)
                                     gACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGtt                                                    >  1:2785590/1‑93 (MQ=255)
                                     gACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGtt                                                    >  1:4251191/1‑93 (MQ=255)
                                     gACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGtt                                                    <  1:7631334/93‑1 (MQ=255)
                                       cAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTga                                                  <  1:3563331/93‑1 (MQ=255)
                                        aGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgac                                                 >  2:1736128/1‑93 (MQ=255)
                                        aGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgac                                                 <  2:6851205/93‑1 (MQ=255)
                                         gctgctTGTTCGAATGTCAGCGCTTCACGCTGAGTTCCCCATTGGCCACCGCCTGGCAGTGAGGCGGGCATCATCAACTGCTTATCGTTgacc                                                >  2:4297667/1‑92 (MQ=255)
                                         gctgctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacg                                                >  1:502502/1‑93 (MQ=255)
                                         gctgctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacg                                                >  1:2294264/1‑93 (MQ=255)
                                          ctgctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgc                                               <  1:7677815/93‑1 (MQ=255)
                                           tgctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgcg                                              >  2:224648/1‑93 (MQ=255)
                                            gctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgcga                                             <  1:3792675/93‑1 (MQ=255)
                                             ctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgcgac                                            <  1:2568132/93‑1 (MQ=255)
                                             ctTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgcgac                                            >  2:732053/1‑93 (MQ=255)
                                               tGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgcgacgc                                          <  1:6693665/93‑1 (MQ=255)
                                               tGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTgacgcgacgc                                          <  1:6497220/93‑1 (MQ=255)
                                                 ttCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTg                                        <  2:6122919/93‑1 (MQ=255)
                                                  tCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCCACTCTTTATCGTTGACGCGACGCTGt                                       >  2:7676530/1‑93 (MQ=255)
                                                  tCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGt                                       >  2:5314627/1‑93 (MQ=255)
                                                  tCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGt                                       <  1:4337178/93‑1 (MQ=255)
                                                    gAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTaa                                     <  2:5846313/93‑1 (MQ=255)
                                                     aaTGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAAt                                    <  1:3275323/93‑1 (MQ=255)
                                                       tGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTc                                  <  1:5330489/93‑1 (MQ=255)
                                                       tGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTc                                  >  1:132891/1‑93 (MQ=255)
                                                          cAGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGc                               <  1:1392291/93‑1 (MQ=255)
                                                           aGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTTCGcc                              >  1:1727907/1‑93 (MQ=255)
                                                           aGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGcc                              <  1:6212276/93‑1 (MQ=255)
                                                           aGCGCTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGcc                              >  2:540855/1‑93 (MQ=255)
                                                            gcgcTTCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCa                             >  2:4831303/1‑93 (MQ=255)
                                                                ttCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGttc                         >  1:6078910/1‑93 (MQ=255)
                                                                ttCACGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGttc                         <  2:5038626/93‑1 (MQ=255)
                                                                   aCGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGttcttc                      <  1:4370656/93‑1 (MQ=255)
                                                                   aCGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGttcttc                      <  1:2127559/93‑1 (MQ=255)
                                                                    cGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCg                     <  1:665179/93‑1 (MQ=255)
                                                                    cGCTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCg                     <  1:4033060/93‑1 (MQ=255)
                                                                      cTGAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCggt                   <  2:7771179/93‑1 (MQ=255)
                                                                        gAGTTCCCCATTCGCTACTGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCggtgg                 <  1:190725/93‑1 (MQ=255)
                                                                        gAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCggtgg                 <  2:4056910/93‑1 (MQ=255)
                                                                        gAGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCggtgg                 >  2:3148118/1‑93 (MQ=255)
                                                                         aGTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCggtggt                <  2:5612412/93‑1 (MQ=255)
                                                                          gTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCTAGTTCTTCGGTGGtt               >  2:2710894/1‑93 (MQ=255)
                                                                          gTTCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGtt               <  1:5544934/93‑1 (MQ=255)
                                                                            tCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGc             <  2:3689180/93‑1 (MQ=255)
                                                                            tCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGc             >  2:1919320/1‑93 (MQ=255)
                                                                            tCCCCATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGc             >  2:6451676/1‑93 (MQ=255)
                                                                              cccATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGa           >  2:7899420/1‑93 (MQ=255)
                                                                                cATTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACa         <  1:1968782/93‑1 (MQ=255)
                                                                                 cttCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACaa        <  1:5245413/92‑1 (MQ=255)
                                                                                 aTTCGCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTACGCCAGTTCTTCGGTGGTTACGACaa        >  2:7544538/1‑93 (MQ=255)
                                                                                     gCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCTGTGGTTGCGACAAACCa    >  1:540278/1‑93 (MQ=255)
                                                                                     gCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCa    <  2:1183469/93‑1 (MQ=255)
                                                                                     gCCACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCa    <  2:2518568/93‑1 (MQ=255)
                                                                                      ccACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCAg   >  1:4588528/1‑93 (MQ=255)
                                                                                       cACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCAGc  >  1:1788310/1‑93 (MQ=255)
                                                                                       cACCGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCAGc  <  2:1642128/93‑1 (MQ=255)
                                                                                          |                                                                                         
CGCGCACCAGTAAAGCTTGTAATTCAGTTTCTGCGGCGACAGCTGCTTGTTCGAATGCCAGCGCTTCACGCTGAGTTCCCCATTCGCCACTGCCTGGCAATGCGGCGGTTATCATCAACTCTTTATCGTTGACGCGACGCTGTAATTCCGCCAGTTCTTCGGTGGTTGCGACAAACCAGC  >  NC_000913/2868454‑2868633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: