BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,922,834	T→C	T157A (ACG→GCG)	syd ←	Syd

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,922,834	0	T	C	99.6%	828.2 / ‑5.3	266	T157A (ACG→GCG)	syd	Syd
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (126/139); total (127/139)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01

Only 100 of 280 total aligned reads displayed.

GGGGTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGTCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCAGTT  >  NC_000913/2922745‑2922923

ggggTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGATTCTAAATGCGTCCGTTTACGTGTTCCCAGCGcctc                                                                                        <  1:5816989/93‑1 (MQ=255)

ggggTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGcctc                                                                                        >  1:422997/1‑93 (MQ=255)

 gggTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCctct                                                                                       >  1:5193792/1‑93 (MQ=255)

   gTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCttt                                                                                     <  2:6219107/93‑1 (MQ=255)

   gTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCttt                                                                                     <  1:6954309/93‑1 (MQ=255)

    tATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTGCGTGTTCCCAGCGCCTCTTTg                                                                                    >  2:5444327/1‑93 (MQ=255)

    tATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTg                                                                                    >  2:1644505/1‑93 (MQ=255)

     aTTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGc                                                                                   >  1:3459054/1‑93 (MQ=255)

      tttGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGca                                                                                  >  2:170427/1‑93 (MQ=255)

      tttGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGca                                                                                  >  2:6391372/1‑93 (MQ=255)

         ggATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCacac                                                                               <  1:1940072/93‑1 (MQ=255)

         ggATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGAATTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCgcac                                                                               >  2:7332165/1‑93 (MQ=255)

            ttACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTc                                                                            <  2:1451801/93‑1 (MQ=255)

             tACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCa                                                                           >  1:1481032/1‑93 (MQ=255)

              aCAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCAc                                                                          <  1:7290161/93‑1 (MQ=255)

               cAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTTCCAGCGCCTCTTTGCACACATCAcg                                                                         >  1:1222616/1‑92 (MQ=255)

               cAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCAcc                                                                         <  2:2572581/93‑1 (MQ=255)

                agaagaGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCg                                                                        >  2:5639001/1‑93 (MQ=255)

                 gaagaGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCGGCGCCTCTTTGCGCACTTCACCgg                                                                       >  2:2984558/1‑93 (MQ=255)

                 gaagaGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCgg                                                                       >  2:3902338/1‑93 (MQ=255)

                  aagaGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGga                                                                      >  2:5806695/1‑93 (MQ=255)

                    gagGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGgaga                                                                    >  1:6424165/1‑93 (MQ=255)

                    gagGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGgaga                                                                    <  1:5725421/93‑1 (MQ=255)

                    gagGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGgaga                                                                    <  2:7796564/93‑1 (MQ=255)

                       gCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGAt                                                                 <  1:6265699/93‑1 (MQ=255)

                       gCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGAt                                                                 >  2:3795318/1‑93 (MQ=255)

                        cTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGAtt                                                                <  2:5176269/93‑1 (MQ=255)

                         ttAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTa                                                               <  2:5341230/93‑1 (MQ=255)

                         ttAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTa                                                               >  2:402830/1‑93 (MQ=255)

                         ttAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTa                                                               >  1:1821051/1‑93 (MQ=255)

                         ttAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTa                                                               <  1:2318588/93‑1 (MQ=255)

                         ttAAGTTGATTAAGGAATGCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTa                                                               <  1:5882066/93‑1 (MQ=255)

                          tAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTac                                                              >  1:2709155/1‑93 (MQ=255)

                           aaGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTaca                                                             <  2:2726338/93‑1 (MQ=255)

                           aaGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTaca                                                             <  1:1005970/93‑1 (MQ=255)

                           aaGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTaca                                                             <  1:765541/93‑1 (MQ=255)

                           aaGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTaca                                                             >  1:2476466/1‑93 (MQ=255)

                             gTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTacaca                                                           <  2:3232343/93‑1 (MQ=255)

                                 aTTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCga                                                       <  2:1784141/93‑1 (MQ=255)

                                  ttAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCgag                                                      >  2:5864106/1‑93 (MQ=255)

                                   tAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGCGATTACACACCgaga                                                     >  1:6615002/1‑93 (MQ=255)

                                   tAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCgaga                                                     <  1:6846962/93‑1 (MQ=255)

                                   tAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCgaga                                                     <  2:1281985/93‑1 (MQ=255)

                                      ggAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGa                                                  >  1:1580482/1‑93 (MQ=255)

                                        aaTTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGAcc                                                <  1:7441690/93‑1 (MQ=255)

                                          ttCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACctc                                              >  2:490927/1‑93 (MQ=255)

                                                aaGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAActc                                        >  1:3724551/1‑93 (MQ=255)

                                                 aGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAActct                                       <  2:6919452/93‑1 (MQ=255)

                                                  gATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACtctt                                      <  2:756840/93‑1 (MQ=255)

                                                   aTTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACtcttc                                     <  2:5697222/93‑1 (MQ=255)

                                                     ttGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTcttctt                                   <  2:4492088/93‑1 (MQ=255)

                                                      tGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCttcttc                                  <  1:851593/93‑1 (MQ=255)

                                                      tGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCttcttc                                  <  1:7184095/93‑1 (MQ=255)

                                                       gAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTcc                                 <  1:4895752/93‑1 (MQ=255)

                                                       gAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTcc                                 <  1:1722579/93‑1 (MQ=255)

                                                       gAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTcc                                 >  2:2384355/1‑93 (MQ=255)

                                                        aGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAGCTCTTCTTCCa                                <  2:2743477/93‑1 (MQ=255)

                                                         ggCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAg                               >  2:3525880/1‑93 (MQ=255)

                                                         ggCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAg                               >  2:936111/1‑93 (MQ=255)

                                                         ggCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAg                               <  2:2106560/93‑1 (MQ=255)

                                                          gCTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGc                              <  1:1551169/93‑1 (MQ=255)

                                                           cTAAATGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCg                             <  2:829933/93‑1 (MQ=255)

                                                              aaTGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTcg                          <  1:932638/93‑1 (MQ=255)

                                                                tGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTcgcg                        >  1:2961070/1‑93 (MQ=255)

                                                                tGCGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTcgcg                        >  2:6690058/1‑93 (MQ=255)

                                                                  cGTCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGAt                      >  2:1916067/1‑93 (MQ=255)

                                                                   gTCCGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATa                     >  2:4139460/1‑93 (MQ=255)

                                                                    tCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaa                    >  2:4206581/1‑93 (MQ=255)

                                                                    tCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaa                    >  2:6480016/1‑93 (MQ=255)

                                                                    tCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaa                    >  2:1019488/1‑93 (MQ=255)

                                                                    tCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaa                    >  2:5829259/1‑93 (MQ=255)

                                                                    tCCGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaa                    >  1:3820314/1‑93 (MQ=255)

                                                                     ccGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaaa                   <  2:2686657/93‑1 (MQ=255)

                                                                     ccGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATaaa                   <  1:353218/93‑1 (MQ=255)

                                                                      cGTTTACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAAt                  >  1:64825/1‑93 (MQ=255)

                                                                      cGTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAAt                  >  2:4998548/1‑93 (MQ=255)

                                                                       gTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATa                 <  1:7381643/93‑1 (MQ=255)

                                                                       gTTTACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATa                 >  1:6144921/1‑93 (MQ=255)

                                                                        tttACGTGTTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAg                >  1:2207957/1‑93 (MQ=255)

                                                                        tctACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAg                <  1:775093/91‑1 (MQ=255)

                                                                         ttACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAgt               >  1:4607452/1‑93 (MQ=255)

                                                                         ttACGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAgt               >  2:6622974/1‑93 (MQ=255)

                                                                           aCGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGGTTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAgtgt             <  1:4647494/93‑1 (MQ=255)

                                                                           aCGTGTTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAgtgt             <  2:3430946/93‑1 (MQ=255)

                                                                             gtgtTCCCAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTgg           <  1:5444328/93‑1 (MQ=255)

                                                                             gtgtTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTTTAACTCTTCTTCTCGCGTCGCGATAAATAGTGTgg           <  1:1373597/93‑1 (MQ=255)

                                                                             gtgtTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTgg           >  1:7819418/1‑93 (MQ=255)

                                                                              tgtTCCCAGCGTCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTggg          >  2:7721497/1‑93 (MQ=255)

                                                                               gtTCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGggc         <  1:2432390/93‑1 (MQ=255)

                                                                                ttCCCAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGggcg        >  2:4655902/1‑93 (MQ=255)

                                                                                  cccAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGggcggc      >  2:5153094/1‑93 (MQ=255)

                                                                                   ccAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCa     <  1:3991852/93‑1 (MQ=255)

                                                                                   ccAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCa     <  2:6096805/93‑1 (MQ=255)

                                                                                   ccAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCa     >  1:1075294/1‑93 (MQ=255)

                                                                                   ccAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCa     <  2:7889456/93‑1 (MQ=255)

                                                                                    cAGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCAg    <  2:35598/93‑1 (MQ=255)

                                                                                    cAGCGCCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATGGTGTGGGCGGCAg    >  1:2525897/1‑93 (MQ=255)

                                                                                     aGCGCCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCAGt   <  1:4022878/93‑1 (MQ=255)

                                                                                      gcgcCTCTTTGGCCTATTCCCCGGAGAGATGACCATCCGGGATGACCTTCAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCAGtt  <  2:4330536/93‑1 (MQ=255)

                                                                                      gcgcCTCTTTGCGCACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCAGtt  >  1:2607121/1‑93 (MQ=255)

GGGGTATTTGGATTACAGAAGAGGCTTAAGTTGATTAAGGAATTCCGCAAGATTTGAGGCTAAATGCGTCCGTTTACGTGTTCCCAGCGTCTCTTTGCACACTTCACCGGAGAGATTACACACCGAGATGACCTCTAACTCTTCTTCCAGCGTCGCGATAAATAGTGTGGGCGGCAGTT  >  NC_000913/2922745‑2922923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`