BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,036,938	T→C	T276A (ACG→GCG)	xerD ←	XerD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,036,938	0	T	C	99.7%	891.2 / ‑5.2	288	T276A (ACG→GCG)	xerD	XerD
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (146/141); total (147/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.45e-01

Only 100 of 315 total aligned reads displayed.

TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGC  >  NC_000913/3036848‑3037026

ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATACATTTGCgcgg                                                                                        >  1:7533795/1‑93 (MQ=255)

ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg                                                                                        >  2:2549034/1‑93 (MQ=255)

ttCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcgg                                                                                        >  2:690565/1‑93 (MQ=255)

 tCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggt                                                                                       <  2:3960124/93‑1 (MQ=255)

  cccGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCgcggtg                                                                                      <  1:3347990/93‑1 (MQ=255)

    cGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGga                                                                                    <  2:6853664/93‑1 (MQ=255)

    cGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGga                                                                                    <  2:5195493/93‑1 (MQ=255)

    cGTTCTTATCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGga                                                                                    <  1:4663527/93‑1 (MQ=255)

     gTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgag                                                                                   >  2:5248928/1‑93 (MQ=255)

      ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga                                                                                  >  2:7863481/1‑93 (MQ=255)

      ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga                                                                                  >  2:1626538/1‑93 (MQ=255)

      ttCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgaga                                                                                  <  2:2194721/93‑1 (MQ=255)

       tCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagag                                                                                 >  1:2518219/1‑93 (MQ=255)

        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                >  1:2175491/1‑93 (MQ=255)

        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                >  1:5696402/1‑93 (MQ=255)

        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                <  2:857306/93‑1 (MQ=255)

        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                <  2:4419972/93‑1 (MQ=255)

        cTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgagaga                                                                                <  2:4182618/93‑1 (MQ=255)

         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGgcgaggt                                                                               >  2:3895757/1‑91 (MQ=255)

         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               >  1:6399582/1‑93 (MQ=255)

         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               >  1:6512355/1‑93 (MQ=255)

         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               >  2:1708704/1‑93 (MQ=255)

         ttttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGAt                                                                               <  1:2614527/93‑1 (MQ=255)

          tttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATc                                                                              >  2:2254/1‑93 (MQ=255)

          tttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATc                                                                              <  1:4464890/93‑1 (MQ=255)

           ttCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCg                                                                             >  2:1601897/1‑93 (MQ=255)

              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:1051268/93‑1 (MQ=255)

              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:1611319/93‑1 (MQ=255)

              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:981200/93‑1 (MQ=255)

              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          >  2:6518631/1‑93 (MQ=255)

              aGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  1:3822297/93‑1 (MQ=255)

               gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt                                                                         <  2:7081109/93‑1 (MQ=255)

               gACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgt                                                                         <  1:1722229/93‑1 (MQ=255)

                aCATCACGCACGGGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtgtg                                                                        <  1:3660096/93‑1 (MQ=255)

                   tCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGcc                                                                     >  2:3507935/1‑93 (MQ=255)

                   tCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGcc                                                                     >  2:2935974/1‑93 (MQ=255)

                      cGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAg                                                                  <  1:1378868/93‑1 (MQ=255)

                        cccGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTa                                                                >  1:5394747/1‑93 (MQ=255)

                             gggTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATc                                                           >  2:7669274/1‑93 (MQ=255)

                                tGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGc                                                        >  1:4564470/1‑93 (MQ=255)

                                 gATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcc                                                       >  1:4253978/1‑92 (MQ=255)

                                  aTGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcac                                                      <  1:70009/93‑1 (MQ=255)

                                   tGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcacc                                                     >  1:4155599/1‑93 (MQ=255)

                                     cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac                                                   <  1:4750522/93‑1 (MQ=255)

                                     cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac                                                   >  2:1568101/1‑93 (MQ=255)

                                     cTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGcaccac                                                   <  1:3766421/93‑1 (MQ=255)

                                      tGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcg                                                  <  2:7356661/93‑1 (MQ=255)

                                      tGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcg                                                  >  1:6006192/1‑93 (MQ=255)

                                       gTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgc                                                 >  1:2927246/1‑93 (MQ=255)

                                        ttGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAcgcg                                                >  1:3043755/1‑93 (MQ=255)

                                         tgatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGt                                               >  2:3372730/1‑93 (MQ=255)

                                         tgatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGt                                               >  1:4955419/1‑93 (MQ=255)

                                         tgatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGt                                               >  1:7144682/1‑93 (MQ=255)

                                          gattaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTa                                              <  1:7289556/93‑1 (MQ=255)

                                          gatgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTa                                              <  1:1951072/93‑1 (MQ=255)

                                           atgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaa                                             >  2:4853020/1‑93 (MQ=255)

                                            tgaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTaaa                                            >  1:5541901/1‑93 (MQ=255)

                                             gaAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAAt                                           <  1:623054/93‑1 (MQ=255)

                                              aaGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATc                                          <  2:5074632/93‑1 (MQ=255)

                                              aaGTTGCAGCAGACGCGCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATc                                          <  1:6740472/93‑1 (MQ=255)

                                                gTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCg                                        <  1:5822847/93‑1 (MQ=255)

                                                 ttGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGc                                       <  1:7935919/93‑1 (MQ=255)

                                                 ttGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGc                                       >  2:2753815/1‑93 (MQ=255)

                                                      gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAt                                  >  1:2402656/1‑93 (MQ=255)

                                                      gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCAt                                  >  2:7183222/1‑93 (MQ=255)

                                                      gCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCAAGCGTAAATCCGCAccct                                  >  2:6432716/1‑91 (MQ=255)

                                                        aGACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGa                                <  1:3239403/93‑1 (MQ=255)

                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          >  1:6122437/1‑50 (MQ=255)

                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCtg                                                                          <  2:6122436/50‑1 (MQ=255)

                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAt                               <  2:1068142/93‑1 (MQ=255)

                                                         gACGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAt                               >  1:5213151/1‑93 (MQ=255)

                                                           cGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt                             >  1:2337513/1‑93 (MQ=255)

                                                           cGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt                             <  2:3292635/93‑1 (MQ=255)

                                                           cGCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGAttt                             <  1:626289/93‑1 (MQ=255)

                                                            gCTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTta                            >  1:912660/1‑93 (MQ=255)

                                                             cTCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaa                           <  1:1888283/93‑1 (MQ=255)

                                                              tCGGTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaat                          <  2:4689463/93‑1 (MQ=255)

                                                                ggTAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTtaataa                        <  2:5607232/93‑1 (MQ=255)

                                                                 gTAGCGACATGCGTATAAATGTGCGCGGTTGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATaaa                       <  1:5853482/93‑1 (MQ=255)

                                                                  tAGCGACATGCGTATAAATTTGCGCGGTGGAGTGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAt                      >  1:62214/1‑93 (MQ=255)

                                                                  tAGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAAt                      <  1:4986140/93‑1 (MQ=255)

                                                                   aGCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATg                     <  2:1811031/93‑1 (MQ=255)

                                                                    gCGACATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGa                    <  1:1219043/93‑1 (MQ=255)

                                                                        cATGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTgg                >  1:7740470/1‑93 (MQ=255)

                                                                         aTGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGc               >  2:6242391/1‑93 (MQ=255)

                                                                          tGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCa              >  2:3824238/1‑93 (MQ=255)

                                                                          tGCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCa              >  1:315500/1‑93 (MQ=255)

                                                                           gCGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaa             >  2:545559/1‑93 (MQ=255)

                                                                            cGTATAAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCaaa            >  2:665545/1‑93 (MQ=255)

                                                                              tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg          <  2:5824333/93‑1 (MQ=255)

                                                                              tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg          >  2:2643508/1‑93 (MQ=255)

                                                                              tataAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAg          >  1:1491902/1‑93 (MQ=255)

                                                                               ttaAATTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGc         <  2:1328118/92‑1 (MQ=255)

                                                                                 aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt       <  1:28418/93‑1 (MQ=255)

                                                                                 aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt       <  1:4822633/93‑1 (MQ=255)

                                                                                 aaaTTTGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGt       <  1:4015253/93‑1 (MQ=255)

                                                                                    tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGag    >  1:2765468/1‑92 (MQ=255)

                                                                                    tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc    >  1:5065273/1‑93 (MQ=255)

                                                                                    tttGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGAc    >  1:5378158/1‑93 (MQ=255)

                                                                                      tGCGCGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGc  >  1:3877707/1‑93 (MQ=255)

TTCCCGTTCTTTTCAGACATCACGCCCGCGGGTGATGCTGTTGATGAAGTTGCCGCAGACGCTCGGTAGCGACATGCGTATAAATTTGCGTGGTGGAGAGATCGCTGTGGCCCAGTAGCATCTGCACCACGCGTAAATCCGCACCATGATTTAATAAATGAGTGGCAAAAGCGTGACGC  >  NC_000913/3036848‑3037026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`