BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,091,676	A→G	Q53R (CAG→CGG)	yqgF →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,091,676	0	A	G	100.0%	685.8 / NA	218	Q53R (CAG→CGG)	yqgF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (106/112); total (106/112)

Only 100 of 233 total aligned reads displayed.

TTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTA  >  NC_000913/3091586‑3091765

ttACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTggcggc                                                                                         >  2:6502002/1‑93 (MQ=255)

  aCCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCg                                                                                       >  1:5765354/1‑93 (MQ=255)

    cGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGa                                                                                     <  1:6204494/93‑1 (MQ=255)

      gCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCGGGGCg                                                                                   >  2:6175809/1‑93 (MQ=255)

      gCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCGGGACg                                                                                   >  1:767001/1‑93 (MQ=255)

        aCCGCTCGCCCTTTGCCTGCAAGTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGaa                                                                                 <  1:331785/93‑1 (MQ=255)

         ccGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGaaa                                                                                >  1:3640087/1‑93 (MQ=255)

           gCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCGGGCGAAata                                                                              >  2:4055623/1‑92 (MQ=255)

           gCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAatc                                                                              <  1:244780/93‑1 (MQ=255)

           ccTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAatc                                                                              <  2:7310142/92‑1 (MQ=255)

            cTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGGCGGACTGGAACATTAGCGGGCGTGTACTGAAAGAGTGGCGGCCGGACGAAatca                                                                             <  2:2687374/93‑1 (MQ=255)

            cTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGaaaaaa                                                                             >  2:5731006/1‑90 (MQ=255)

            cTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCCGACGAAataa                                                                             >  2:4162863/1‑91 (MQ=255)

             tCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCGGAGGACatcct                                                                            >  1:881471/1‑91 (MQ=255)

              cGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAaacatc                                                                           >  1:1936240/1‑93 (MQ=255)

              cGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGGAaacatc                                                                           >  1:1027504/1‑93 (MQ=255)

              cGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCCGACGAAaacaac                                                                           >  2:5607699/1‑91 (MQ=255)

               gCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAAACAtcg                                                                          >  2:6327518/1‑93 (MQ=255)

                cccTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCGCGACGACAAAAtcgt                                                                         >  1:3841824/1‑93 (MQ=255)

                cccTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCAtcgt                                                                         <  1:3567344/93‑1 (MQ=255)

                 ccTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCGGGCGGAAACAtcgtc                                                                        >  1:2971668/1‑93 (MQ=255)

                 ccTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCAtcgtc                                                                        <  1:6271724/93‑1 (MQ=255)

                  cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCGGGCGGAAACAtagtcg                                                                       >  2:3011780/1‑93 (MQ=255)

                  cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAATAAtcgtcg                                                                       >  1:2667015/1‑93 (MQ=255)

                  cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAAAAAtcgtcg                                                                       >  2:1548297/1‑93 (MQ=255)

                  cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAAAAAtcctcg                                                                       >  1:4517632/1‑93 (MQ=255)

                  cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCAtcgtcg                                                                       <  1:4854202/93‑1 (MQ=255)

                   tttGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCgg                                                                      >  2:2554935/1‑93 (MQ=255)

                    ttGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGt                                                                     <  2:4566896/93‑1 (MQ=255)

                        cTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCCGACGAAAGCTTAGTCGGattcc                                                                 >  2:6605814/1‑91 (MQ=255)

                         tGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAAACATCGTCCGTTTTcc                                                                >  2:4308557/1‑93 (MQ=255)

                         tGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGGTTGcc                                                                >  1:7302705/1‑93 (MQ=255)

                           cAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGc                                                              <  2:4863109/93‑1 (MQ=255)

                           cAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGc                                                              <  2:2623942/93‑1 (MQ=255)

                              ttAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCGGACGAAATCATCGTCGGTGTGCGGCTgg                                                           >  1:7775710/1‑92 (MQ=255)

                                aaaGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAat                                                         <  2:3361/93‑1 (MQ=255)

                                 aaGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAata                                                        <  1:7155646/93‑1 (MQ=255)

                                  aGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAatat                                                       <  1:7568930/93‑1 (MQ=255)

                                   acacaGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATg                                                      <  1:3790648/92‑1 (MQ=255)

                                    aacaGGACGGTACGCCGGACTGGAACATTAGCGAGCGTGTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATgg                                                     <  2:4437514/92‑1 (MQ=255)

                                     acaGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGa                                                    <  1:822289/93‑1 (MQ=255)

                                      caGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGGTTGCGCCTGAATATAGag                                                   >  1:1131923/1‑92 (MQ=255)

                                       aGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGGTTGCCGCTGAATATTGACg                                                  >  1:4755531/1‑93 (MQ=255)

                                        ggACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAATCATCGTCGGGTTGGCGCTGAATATGGACgg                                                 >  2:3625663/1‑93 (MQ=255)

                                        ggACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAAACATCGCCGGGTTGGCGCTGTATATAGAggg                                                 >  1:6943587/1‑93 (MQ=255)

                                         gACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGc                                                <  1:5103346/93‑1 (MQ=255)

                                             gTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAATCATCGTCGGTTTGCCGCTGGATATTGACGGGACCg                                            >  2:2850042/1‑93 (MQ=255)

                                              tACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGGTTGCCGCCGAATATTGGCGGCAcccg                                           >  1:5175098/1‑91 (MQ=255)

                                               aCGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAg                                          <  2:6778453/93‑1 (MQ=255)

                                               aCGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAg                                          <  1:4384192/93‑1 (MQ=255)

                                                 gCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGGATATGGGCGGCACCCAGCa                                        >  2:2406377/1‑93 (MQ=255)

                                                 gCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCa                                        <  1:1876117/93‑1 (MQ=255)

                                                  ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAAACATCGTCGGGTTGCCGCTGAATATGGAAGGCACCGAGCaa                                       >  2:157780/1‑93 (MQ=255)

                                                   cGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAAACATCGTCGGGTTGCCGCTGGATATGGACGGCACCGAGCCAc                                      >  1:7193087/1‑93 (MQ=255)

                                                    ggACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAAcc                                     <  1:830084/93‑1 (MQ=255)

                                                    ggACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGGCGGCACCGCGCAAcc                                     >  1:3257868/1‑93 (MQ=255)

                                                    ggACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCCGGCGAAAACATCGTCCGGTTGCCCCTGAATATGGACAGCACCCAGCAAcc                                     >  1:4717492/1‑93 (MQ=255)

                                                      aCTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCAt                                   <  1:5263979/93‑1 (MQ=255)

                                                         ggAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGCGCCACCATTGa                                >  1:4057293/1‑93 (MQ=255)

                                                         ggAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGa                                <  1:3921280/93‑1 (MQ=255)

                                                         ggAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCCGGGGAAATCAACGTCGGGTTGCCGCTGAATATGGACGGCCCCCAGCAACCCTTGa                                >  2:347461/1‑93 (MQ=255)

                                                         ggAACATTATCGAGCGTTTACTGAAAGAGTCGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGa                                <  1:7461374/93‑1 (MQ=255)

                                                         ggAACAGTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGa                                <  1:2720441/93‑1 (MQ=255)

                                                          gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGGCGGACGGAAACATCGTCTGGTTGCCGCTGGATATGGACCGGACCCAGCCACCATTGAc                               >  2:1218933/1‑93 (MQ=255)

                                                          gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATTTGGACGGCACCGAGCAACCATTGAc                               <  2:7623437/93‑1 (MQ=255)

                                                          gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGAc                               <  2:7398692/93‑1 (MQ=255)

                                                           aaCATTATCGAGCGTGTACGGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACt                              <  2:1772780/93‑1 (MQ=255)

                                                               ttATCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAATCATCGTCGGTTTTCCGCTGAAGAATGACCGCACCGCGGAACCATTGACtcgca                          >  2:2515505/1‑89 (MQ=255)

                                                               ttATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCa                          <  2:6888658/93‑1 (MQ=255)

                                                                tATCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCag                         <  2:2672646/93‑1 (MQ=255)

                                                                 aTCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCaga                        <  2:6552111/93‑1 (MQ=255)

                                                                  tCGAGCGTTTACTGAAAGAGTGGCGGCCGGGCGAAATCATCGTCGGTTTGCCGCTGAATATTTACGGCACCGCGCAACCCTTGACTGGCcgag                       >  2:4123960/1‑93 (MQ=255)

                                                                  tCGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCagag                       <  1:6098484/93‑1 (MQ=255)

                                                                   cGAGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgc                      <  2:1046721/93‑1 (MQ=255)

                                                                     aGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAgcgc                    <  2:2874671/93‑1 (MQ=255)

                                                                     aGCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCCAGCAACCCTTGACTGCCCGAgcgc                    >  2:2156595/1‑93 (MQ=255)

                                                                     aGCGTTTACTGAAAGAGTGGCGGCCCGACGAAATCATCGTCGGCTTGCCCCTGAAAATGGACGGGACCGAGCAACCCTTGACTGCCAGAgccc                    >  2:7548125/1‑91 (MQ=255)

                                                                      gCGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGcgcg                   <  1:6708648/93‑1 (MQ=255)

                                                                       cGTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGt                  <  2:4896982/93‑1 (MQ=255)

                                                                       cGTTTACTGAAAGAGTGGCGGCCGGACGAAAACATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGt                  >  2:2069417/1‑93 (MQ=255)

                                                                        gTTTACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTa                 >  1:5860133/1‑93 (MQ=255)

                                                                         tttACTGAAAGAGTGGCGGCCGGGCGAAATCATCGTCGGTTTGCCGCTGGATATGGACGGGACCGCGGAACCATTGACTGGCAGAGCGCGGaa                >  2:1272370/1‑93 (MQ=255)

                                                                         tttACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGACGGGACCGAGCAACCATTGACTGCCAGAGcgcggga                >  1:7350550/1‑90 (MQ=255)

                                                                          ttACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTaaa               <  2:586754/93‑1 (MQ=255)

                                                                           tACTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAt              <  2:5124774/93‑1 (MQ=255)

                                                                            aCTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAtt             <  1:2113590/93‑1 (MQ=255)

                                                                             cTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAttt            <  2:3658980/93‑1 (MQ=255)

                                                                             cTGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCACGTAAAttt            <  2:125750/93‑1 (MQ=255)

                                                                              tGAAAGAGTGGCGGCCGGGCGAAAACATCGTCGGGTTGCCGCTGGATTTGGGCGGGACCGAGCAACCATTGACTTCCCAAGCGCGTAAAtttt           >  2:6070899/1‑92 (MQ=255)

                                                                              tGAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGGCAAtttt           >  1:3815231/1‑92 (MQ=255)

                                                                               gAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGc          <  1:6333906/93‑1 (MQ=255)

                                                                               gAAAGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGc          <  1:6389892/93‑1 (MQ=255)

                                                                                 aaGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATTGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTTCCa        >  2:7267316/1‑93 (MQ=255)

                                                                                 aaGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAGTTTGCCa        <  1:1174297/93‑1 (MQ=255)

                                                                                 aaGAGTGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCa        <  2:775904/93‑1 (MQ=255)

                                                                                   gagTGGCGGCCGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGACGGCACCGCGCAACCATTGACTGCCAGAGCGCGTAAAATTTCCCAc      >  2:3226040/1‑93 (MQ=255)

                                                                                      tGGCGGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGt   <  2:68915/93‑1 (MQ=255)

                                                                                       ggcggcCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTa  <  1:1255154/93‑1 (MQ=255)

                                                                                       ggcggcCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTa  <  1:4218205/93‑1 (MQ=255)

                                                                                       ggcggcCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTa  >  2:4529425/1‑93 (MQ=255)

TTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTA  >  NC_000913/3091586‑3091765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`