| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,099,727 | T→C | intergenic (‑85/+98) | yggN ← / ← b2959 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,099,727 | 0 | T | C | 99.2% | 1137.1 / ‑2.4 | 364 | intergenic (‑85/+98) | yggN/b2959 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (3/0); new base C (174/187); total (177/187) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.35e-01 | |||||||||||
Only 100 of 381 total aligned reads displayed.
ATCATAGTCTTCCCTCAAG‑AAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGCCCGT > NC_000913/3099638‑3099816 | atcatAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaa < 2:6785647/93‑1 (MQ=255)atcatAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaa > 1:3864635/1‑93 (MQ=255)atcatAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaa > 2:7665924/1‑93 (MQ=255) tcatAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaaa < 1:1635432/93‑1 (MQ=255) tcatAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaaa > 1:4181633/1‑93 (MQ=255) tcatAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCaaa < 1:4238022/93‑1 (MQ=255) catAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAac > 1:2147595/1‑93 (MQ=255) atAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAaca > 2:6526512/1‑93 (MQ=255) tAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAacac > 2:2304176/1‑93 (MQ=255) tAGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAacac > 2:7441712/1‑93 (MQ=255) aGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACAcc > 1:4494222/1‑93 (MQ=255) aGTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACAcc < 2:1137688/93‑1 (MQ=255) gTCTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCt < 2:6135642/93‑1 (MQ=38) cTTCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTa < 1:3618885/93‑1 (MQ=255) ttCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGGCGGATGCGGCGCAAACACCTTAt > 2:4307879/1‑93 (MQ=255) ttCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTAt > 1:6298343/1‑93 (MQ=255) ttCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTAt > 1:1126400/1‑93 (MQ=255) tCCCTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATc < 2:4149793/93‑1 (MQ=255) tCCCTCAAG‑AAAACATCAGGCCGGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATc < 1:7013865/93‑1 (MQ=38) cccTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATcc < 1:6070613/93‑1 (MQ=255) ccTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATccc > 2:2985740/1‑93 (MQ=255) ccTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATccc < 2:4763794/93‑1 (MQ=38) cTCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCg > 2:4788096/1‑93 (MQ=255) tCAAGAAAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGc > 2:3787706/1‑93 (MQ=255) aagaaaaa‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCt > 1:4889136/5‑93 (MQ=255) gaaaaa‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTAc < 1:7560095/91‑1 (MQ=255) gaaaaa‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTAc < 2:7848815/91‑1 (MQ=255) aaaaa‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACt < 1:1458565/92‑1 (MQ=255) aaaaa‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACt > 2:6944215/2‑93 (MQ=255) aaaa‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTc < 2:4555348/93‑1 (MQ=255) a‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGAt < 2:3112381/93‑1 (MQ=255) a‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGAt < 2:4901273/93‑1 (MQ=255) a‑aTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCCACTCGAt > 2:5668409/1‑93 (MQ=255) a‑aTCAGGCAAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGAt < 1:6199772/93‑1 (MQ=255) ggCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGc > 1:6567539/1‑93 (MQ=255) gCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCa < 1:2041749/93‑1 (MQ=255) cAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATc > 1:7211857/1‑93 (MQ=255) cAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATc < 1:6680521/93‑1 (MQ=255) aGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCt < 1:991531/93‑1 (MQ=255) aGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCt > 2:4240885/1‑93 (MQ=255) aTTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTc < 1:233377/93‑1 (MQ=255) tttGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTcc > 2:2480918/1‑93 (MQ=255) tttGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTcc < 2:6053947/93‑1 (MQ=255) tttGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTcc > 1:5923470/1‑93 (MQ=255) ttGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCa < 2:3565138/93‑1 (MQ=255) gCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAgg > 1:5709541/1‑93 (MQ=255) cTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGc < 1:5114578/93‑1 (MQ=255) tGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGcc > 2:5257588/1‑93 (MQ=255) tGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGcc < 2:2357341/93‑1 (MQ=255) cccAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGAt > 1:2486270/1‑93 (MQ=255) ccAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATa < 1:5316308/93‑1 (MQ=255) ccAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATa < 1:444973/93‑1 (MQ=255) ccAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATa > 1:3982526/1‑93 (MQ=255) ccAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATa < 2:6226947/93‑1 (MQ=255) aGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAg > 1:4701978/1‑93 (MQ=255) aGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAg < 1:3101209/93‑1 (MQ=255) gATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGc > 1:1904219/1‑93 (MQ=255) aTTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCg > 2:3935050/1‑93 (MQ=255) aTTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCg > 2:828571/1‑93 (MQ=255) ttGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGt > 2:1239414/1‑93 (MQ=255) aTAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAgc < 2:2095728/93‑1 (MQ=255) aTAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAgc > 2:5005131/1‑93 (MQ=255) aTAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAgc < 1:6863254/93‑1 (MQ=255) tAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAgcg > 2:4805032/1‑93 (MQ=255) tAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAgcg > 1:5024335/1‑93 (MQ=255) aCAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCa > 1:1011291/1‑93 (MQ=255) aCAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCa < 2:5858458/93‑1 (MQ=255) cAAAGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATACGCGTAGCGCAt > 1:2418841/1‑93 (MQ=255) aaaGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATc < 1:4592763/93‑1 (MQ=255) aaGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCa > 1:4085026/1‑93 (MQ=255) aGTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAg < 2:2640556/93‑1 (MQ=255) gTACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAgg < 2:7339512/93‑1 (MQ=255) tACGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGc < 1:2225870/93‑1 (MQ=255) aCGCGTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCa < 2:5117080/93‑1 (MQ=255) cgcgTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAg > 2:6307525/1‑93 (MQ=255) gctttttCCATGCCGGATGCGCCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGt < 1:2884054/90‑1 (MQ=255) gcgTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGt > 1:4124325/1‑93 (MQ=255) gTTTTCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGttt < 1:925095/93‑1 (MQ=255) ttttCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt < 1:2726098/93‑1 (MQ=255) ttttCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt > 1:7330102/1‑93 (MQ=255) ttttCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt > 2:5358506/1‑93 (MQ=255) ttttCCATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGAGCATCAGGCAGtttt > 1:3445355/1‑93 (MQ=255) ttttCAATGCCGGATGCGGCGCAAACCCCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt < 2:4034949/93‑1 (MQ=255) ccATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCAt < 1:2774641/93‑1 (MQ=255) cATGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCAtt > 1:5387127/1‑93 (MQ=255) aTGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCAttt > 2:1628844/1‑93 (MQ=255) aTGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCAttt < 1:518009/93‑1 (MQ=255) tGCCGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTg > 1:6331633/1‑93 (MQ=255) ccGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTc < 1:7910824/93‑1 (MQ=255) ccGGATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTc < 2:443669/93‑1 (MQ=255) ggATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCAt < 1:2668964/93‑1 (MQ=255) ggATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCAt > 2:1828752/1‑93 (MQ=255) gATGCGGCGCAAACCCCTTATCCCGCCTTCTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATc < 1:7856330/93‑1 (MQ=255) gATGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATc < 1:169267/93‑1 (MQ=255) tGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGc > 2:2796425/1‑93 (MQ=255) tGCGGCGCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGc > 1:6586723/1‑93 (MQ=255) gcggcgCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGcc > 1:3504028/1‑93 (MQ=255) cggcgCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGccc < 2:7502257/93‑1 (MQ=255) cggcgCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGccc < 2:3704738/93‑1 (MQ=255) ggcgCAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGCCCg > 2:3256355/1‑93 (MQ=255) | ATCATAGTCTTCCCTCAAG‑AAAA‑ATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTTGTCATCGCCCGT > NC_000913/3099638‑3099816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |