BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,164,677	T→C	K353R (AAG→AGG)	b3020 ←	putative transport periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,164,677	0	T	C	100.0%	937.1 / NA	292	K353R (AAG→AGG)	b3020	putative transport periplasmic protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/158); total (134/158)

Only 100 of 313 total aligned reads displayed.

TAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCTTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTT  >  NC_000913/3164587‑3164766

tAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCctt                                                                                         >  1:5349927/1‑93 (MQ=255)

tAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCctt                                                                                         >  1:897850/1‑93 (MQ=255)

tAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCctt                                                                                         <  1:6451138/93‑1 (MQ=255)

 aGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTACCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCcttt                                                                                        <  2:3401126/93‑1 (MQ=255)

   aaCAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGc                                                                                      <  1:7117283/93‑1 (MQ=255)

   aaCAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGc                                                                                      >  2:6741784/1‑93 (MQ=255)

    aCAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCa                                                                                     <  1:7869583/93‑1 (MQ=255)

      aGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGt                                                                                   >  1:4088755/1‑93 (MQ=255)

       gCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGtt                                                                                  <  2:6429563/93‑1 (MQ=255)

       gCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGtt                                                                                  <  2:1765107/93‑1 (MQ=255)

         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                >  1:5750960/1‑93 (MQ=255)

         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                >  2:7471291/1‑93 (MQ=255)

         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                >  1:3941192/1‑93 (MQ=255)

         tCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCa                                                                                <  2:1677891/93‑1 (MQ=255)

          taaaGCCTAGCGCATGAGAGGGGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  1:4474173/92‑1 (MQ=255)

          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  2:1893515/93‑1 (MQ=255)

          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  2:4621393/93‑1 (MQ=255)

          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  1:1807646/93‑1 (MQ=255)

          cAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCAt                                                                               <  1:1040902/93‑1 (MQ=255)

            aaGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCg                                                                             >  2:5444202/1‑93 (MQ=255)

            aaGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCg                                                                             <  1:4862176/93‑1 (MQ=255)

            aaGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCg                                                                             <  1:4304927/93‑1 (MQ=255)

              gCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGaa                                                                           <  2:3935890/93‑1 (MQ=255)

              gCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGaa                                                                           <  1:6345822/93‑1 (MQ=255)

               cGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAc                                                                          <  1:1349805/93‑1 (MQ=255)

                 tAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTAGCAGTTCATCCAAcgt                                                                        >  1:6102868/1‑93 (MQ=255)

                  aGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAcgtc                                                                       <  2:2957144/93‑1 (MQ=255)

                  aGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAcgtc                                                                       <  2:3308473/93‑1 (MQ=255)

                    cGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAAcgtcgt                                                                     <  2:5847693/93‑1 (MQ=255)

                     ggATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACgtcgtc                                                                    <  2:3006817/93‑1 (MQ=255)

                      gATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGtcgtcg                                                                   >  1:1489128/1‑93 (MQ=255)

                       aTGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTcgc                                                                  >  2:4221097/1‑93 (MQ=255)

                         gagaGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCgcgc                                                                <  1:6869461/93‑1 (MQ=255)

                            agGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTaa                                                             >  2:3799944/1‑93 (MQ=255)

                            agGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTaa                                                             <  2:5045079/93‑1 (MQ=255)

                             ggCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTaaa                                                            >  1:2509770/1‑93 (MQ=255)

                                gtcttACCCCGCCTGTTTCAGCAAGGCTTGTGCCATCGCGACGCGCTCACACATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGcc                                                         <  2:4864925/93‑1 (MQ=255)

                                gtcgtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGcc                                                         <  1:7762335/93‑1 (MQ=255)

                                 tcgtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCt                                                        <  1:5020098/93‑1 (MQ=255)

                                   gtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCttt                                                      <  2:2544982/93‑1 (MQ=255)

                                   gtATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCttt                                                      >  2:4471627/1‑93 (MQ=255)

                                    tATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCtttt                                                     <  1:983280/93‑1 (MQ=255)

                                     aTCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTa                                                    >  1:7236912/1‑93 (MQ=255)

                                     aTCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTa                                                    >  1:3715078/1‑93 (MQ=255)

                                      tCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAc                                                   >  2:3180481/1‑93 (MQ=255)

                                      tCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAc                                                   >  1:1735039/1‑93 (MQ=255)

                                       cccGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTAcc                                                  <  1:211777/93‑1 (MQ=255)

                                        ccGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACct                                                 >  2:5255766/1‑93 (MQ=255)

                                         catcTGTTTCAGCAATGCTTTTGGCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACTTCGTCGCGCTAAAGCCTTTTACctc                                                <  2:102786/90‑1 (MQ=255)

                                         cGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCATTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctc                                                <  2:6072670/93‑1 (MQ=255)

                                         cGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctc                                                <  1:4353529/93‑1 (MQ=255)

                                          gCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctct                                               >  1:7349995/1‑93 (MQ=255)

                                          gCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACctct                                               <  1:2658589/93‑1 (MQ=255)

                                           tgtttttCAGCAAGGCTTTTGCTATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTg                                              <  2:3878181/89‑1 (MQ=255)

                                           ccTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTg                                              <  2:6783736/93‑1 (MQ=255)

                                           ccTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTg                                              <  1:6647110/93‑1 (MQ=255)

                                            cTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTgg                                             <  1:6189667/93‑1 (MQ=255)

                                             tGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggc                                            >  1:7022874/1‑93 (MQ=255)

                                             tGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggc                                            >  1:6286010/1‑93 (MQ=255)

                                             tGTTGCAGCAAGGCTTTTGCCATCGCGACGCGCTCACACATAGGCCTGTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggc                                            <  2:7136441/93‑1 (MQ=255)

                                              gTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCCTTGCAGTTCACCGAACGTCGTCGCGCTAAAGCCTTTTACCTCCggcg                                           >  2:7001636/1‑93 (MQ=255)

                                               tttCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggcgg                                          >  1:2949298/1‑93 (MQ=255)

                                               tttCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggcgg                                          >  2:7670837/1‑93 (MQ=255)

                                                ttCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTggcggc                                         <  2:3440230/93‑1 (MQ=255)

                                                   aGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTc                                      >  1:4223167/1‑93 (MQ=255)

                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     <  1:6012194/93‑1 (MQ=255)

                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     >  1:350048/1‑93 (MQ=255)

                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     >  2:5646317/1‑93 (MQ=255)

                                                    gCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCa                                     <  1:2410857/93‑1 (MQ=255)

                                                      aaGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGc                                   >  1:2158484/1‑93 (MQ=255)

                                                      aaGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGc                                   >  1:2327627/1‑93 (MQ=255)

                                                      aaGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGAGTCAga                                   >  2:2784566/1‑92 (MQ=255)

                                                      aaGGCTTTCGCCATCGCGCCCCGCTCACCCCTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGc                                   <  2:7607294/93‑1 (MQ=255)

                                                       aGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCg                                  >  1:599464/1‑93 (MQ=255)

                                                       aGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCg                                  >  2:3522235/1‑93 (MQ=255)

                                                       aGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTATGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCg                                  <  2:1540682/93‑1 (MQ=255)

                                                        ggCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGt                                 <  2:1146667/93‑1 (MQ=255)

                                                        ggCTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGt                                 >  1:3004555/1‑93 (MQ=255)

                                                          cTTTTGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTgg                               >  1:538502/1‑93 (MQ=255)

                                                           ttttGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGt                              <  1:4665721/93‑1 (MQ=255)

                                                           ttttGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGt                              <  1:283306/93‑1 (MQ=255)

                                                              tGCCATCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGc                           <  2:5210642/93‑1 (MQ=255)

                                                                 cATCGCGACGCGCTCACTCATTGCCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCggg                        <  2:4354806/93‑1 (MQ=255)

                                                                   tCGCGACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCg                      >  2:2212384/1‑93 (MQ=255)

                                                                     gcgACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGtt                    >  2:1974671/1‑93 (MQ=255)

                                                                     gcgACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGtt                    >  2:1303566/1‑93 (MQ=255)

                                                                      cgACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTtc                   <  2:3355992/93‑1 (MQ=255)

                                                                       gACGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTtct                  >  1:3888865/1‑93 (MQ=255)

                                                                        aCGCGCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTtctc                 <  1:198215/93‑1 (MQ=255)

                                                                         cgcgCTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCa                <  1:7472617/93‑1 (MQ=255)

                                                                            gcTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAcc             >  2:856241/1‑93 (MQ=255)

                                                                            gcTCACTCATTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAcc             <  1:3273358/93‑1 (MQ=255)

                                                                             ctcagtcaTTGGCCTTTGCAGTTCATCGAACGTCGTTGCGCTTAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAAccc            <  1:5262160/93‑1 (MQ=255)

                                                                                   caTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAc      >  2:1500093/1‑93 (MQ=255)

                                                                                   caTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAc      >  2:2021341/1‑93 (MQ=255)

                                                                                   caTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAc      >  2:5991705/1‑93 (MQ=255)

                                                                                    aTTGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTAcc     >  2:3771255/1‑93 (MQ=255)

                                                                                     ttGGCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCt    >  1:5887894/1‑93 (MQ=255)

                                                                                       ggCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCttt  <  2:2377911/93‑1 (MQ=255)

                                                                                       ggCCTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCttt  <  2:7817066/93‑1 (MQ=255)

TAGAACAGCTCAAAGCGTAGCGGATGAGAGGCGTCGTATCCCGCCTGTTTCAGCAAGGCTTTTGCCATCGCGACGCGCTCACTCATTGGCTTTTGCAGTTCATCGAACGTCGTCGCGCTAAAGCCTTTTACCTCTGGCGGCGTCAGCGTGGTTGCGGGCGTTCTCAACCCCAGTACCTTT  >  NC_000913/3164587‑3164766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`