Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,185,776 T→C F121L (TTC→CTC)  yqiG → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,185,7760TC99.7% 1082.9 / NA 337F121L (TTC→CTC) yqiGputative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (159/177);  minor base A (1/0);  total (160/177)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 351 total aligned reads displayed.

GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG  >  NC_000913/3185686‑3185865
                                                                                          |                                                                                         
ggATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTAtctc                                                                                         <  1:7182622/93‑1 (MQ=255)
   tttACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAt                                                                                      >  2:781344/1‑93 (MQ=255)
     tACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaa                                                                                    <  1:100300/93‑1 (MQ=255)
     tACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaa                                                                                    <  1:5431511/93‑1 (MQ=255)
      aCTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaaa                                                                                   >  1:3540527/1‑93 (MQ=255)
       cTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAg                                                                                  >  2:2208873/1‑93 (MQ=255)
       cTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAg                                                                                  <  2:7186145/93‑1 (MQ=255)
        tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAATAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                 >  2:3189600/1‑93 (MQ=255)
        tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                 <  2:4221286/93‑1 (MQ=255)
        tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                 >  1:4457818/1‑93 (MQ=255)
         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                >  1:4758541/1‑93 (MQ=255)
         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                <  1:3105032/93‑1 (MQ=255)
         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                <  1:2591923/93‑1 (MQ=255)
         gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                >  2:6958025/1‑93 (MQ=255)
          atgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGa                                                                               <  2:3965578/93‑1 (MQ=255)
           tgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGaa                                                                              >  1:1334581/1‑93 (MQ=255)
            gaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGaaa                                                                             <  2:6531854/93‑1 (MQ=255)
             aaTTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGaaaa                                                                            <  2:6092918/93‑1 (MQ=255)
              aTTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAt                                                                           >  2:7614906/1‑93 (MQ=255)
                 tATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCa                                                                        <  1:1938125/93‑1 (MQ=255)
                   ttGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAt                                                                      >  1:7252099/1‑93 (MQ=255)
                    tGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAtt                                                                     >  1:1054823/1‑93 (MQ=255)
                    tGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAtt                                                                     >  1:7417049/1‑93 (MQ=255)
                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    <  2:3274409/93‑1 (MQ=255)
                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    <  2:167290/93‑1 (MQ=255)
                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    >  2:5849769/1‑93 (MQ=255)
                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    <  1:5249399/93‑1 (MQ=255)
                     gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTa                                                                    >  2:4111118/1‑93 (MQ=255)
                      aaaaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAt                                                                   <  2:5556792/93‑1 (MQ=255)
                       aaaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATc                                                                  <  2:4473770/93‑1 (MQ=255)
                         aaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCa                                                                <  2:7481941/93‑1 (MQ=255)
                          aaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCat                                                               >  2:2300786/1‑93 (MQ=255)
                          aaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCat                                                               >  1:4687375/1‑93 (MQ=255)
                           aCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCata                                                              <  1:7542260/93‑1 (MQ=255)
                             tCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGCTAAAGGGAAAATGCAATTATCCatatc                                                            >  1:6899652/1‑92 (MQ=255)
                             tCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatc                                                            <  1:4036330/93‑2 (MQ=255)
                              cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatct                                                           <  2:6001945/93‑3 (MQ=255)
                              cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatct                                                           <  1:833885/93‑3 (MQ=255)
                                   aaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                      >  1:6301524/1‑93 (MQ=255)
                                     aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                    <  2:5166677/93‑1 (MQ=255)
                                     aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                    >  1:5858360/1‑93 (MQ=255)
                                     aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTc                                                    <  1:6711905/93‑1 (MQ=255)
                                      ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACACCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCCCCTCa                                                   <  1:1117601/93‑1 (MQ=255)
                                      ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                   >  2:2727729/1‑93 (MQ=255)
                                      ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                   <  2:4530525/93‑1 (MQ=255)
                                       cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                  <  1:1246889/93‑1 (MQ=255)
                                        tGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                 >  2:1007648/1‑93 (MQ=255)
                                         gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACCACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                >  2:6577704/1‑93 (MQ=255)
                                         gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                <  2:1866352/93‑1 (MQ=255)
                                         gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                >  2:1304852/1‑93 (MQ=255)
                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  2:3703706/93‑1 (MQ=255)
                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  2:5354387/93‑1 (MQ=255)
                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  1:5937274/93‑1 (MQ=255)
                                          aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                               <  1:4853112/93‑1 (MQ=255)
                                            cGATGGTTCGTTCCCTATCAAAAAATAAAAACAAATTACAACTTAGCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATg                                             <  1:2473482/93‑1 (MQ=255)
                                             gATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATgg                                            <  2:4927302/93‑1 (MQ=255)
                                               tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                          <  1:180415/93‑1 (MQ=255)
                                               tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                          >  1:6464895/1‑93 (MQ=255)
                                                ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                         <  1:2366190/93‑1 (MQ=255)
                                                ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                         >  1:5103840/1‑93 (MQ=255)
                                                  ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                       >  1:4940022/1‑93 (MQ=255)
                                                  ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                       <  2:31032/93‑1 (MQ=255)
                                                      tACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATAc                                   <  2:5429354/93‑1 (MQ=255)
                                                       aCCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACa                                  <  1:1594781/93‑1 (MQ=255)
                                                        cccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaa                                 >  2:3391974/1‑93 (MQ=255)
                                                         ccTATCGAAAAAGAAGAACAAATTGCGCCGTCCCGCGCTAAAGGGAAAAGGCAATTATCCATATCTGCATCTCAGGCATGGTTAAAATACaaa                                <  1:6958787/93‑1 (MQ=255)
                                                         ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaaa                                <  2:743496/93‑1 (MQ=255)
                                                          cTATCGAAAAAGAAAAACAAATTACAGCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                               <  1:3314211/93‑1 (MQ=255)
                                                          cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                               <  2:3080896/93‑1 (MQ=255)
                                                          cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                               >  2:961115/1‑93 (MQ=255)
                                                            aTCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAt                             >  2:1947140/1‑93 (MQ=255)
                                                               gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCa                          >  1:2951564/1‑93 (MQ=255)
                                                                aaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                         >  1:5542841/1‑93 (MQ=255)
                                                                aaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                         >  2:1544847/1‑93 (MQ=255)
                                                                 aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaaa                        <  1:3761927/93‑1 (MQ=255)
                                                                 aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaaa                        <  1:6116894/93‑1 (MQ=255)
                                                                  aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                       <  2:141858/93‑1 (MQ=255)
                                                                   aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                      <  2:5120197/93‑1 (MQ=255)
                                                                   aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                      >  2:4423274/1‑93 (MQ=255)
                                                                   aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                      <  1:3345382/93‑1 (MQ=255)
                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCGTATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   <  1:1877360/93‑1 (MQ=255)
                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAGGATGCAAACTGGa                   <  2:2918257/93‑1 (MQ=255)
                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   <  1:828865/93‑1 (MQ=255)
                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   >  1:7867944/1‑93 (MQ=255)
                                                                      aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                   >  2:2638404/1‑93 (MQ=255)
                                                                       aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                  >  2:297543/1‑93 (MQ=255)
                                                                        aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                 >  2:4765846/1‑93 (MQ=255)
                                                                        aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                 >  2:3780411/1‑93 (MQ=255)
                                                                        aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                 <  2:2520237/93‑1 (MQ=255)
                                                                          aCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcc               <  2:5879270/93‑1 (MQ=255)
                                                                            aaaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctc             >  1:7439114/1‑93 (MQ=255)
                                                                             aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTTAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc            >  2:117184/1‑93 (MQ=255)
                                                                             aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc            <  1:4180535/93‑1 (MQ=255)
                                                                             aaTTACAAACTATCTCCATAAAGGGAAAATGCAATTATCCATGTCTGCACCTCAGGCATGGTTAAAATCCAAAGATGCAAACTGGACGcctcc            <  1:4628326/93‑1 (MQ=255)
                                                                              aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcct           <  2:6707641/93‑1 (MQ=255)
                                                                              aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcct           >  2:4668860/1‑93 (MQ=255)
                                                                                    aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACtt     >  2:6406393/1‑93 (MQ=255)
                                                                                    aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACtt     >  2:568776/1‑93 (MQ=255)
                                                                                     cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACttt    <  1:1544848/93‑1 (MQ=255)
                                                                                      ttATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg   <  1:2734781/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG  >  NC_000913/3185686‑3185865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: