BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,202,607	T→C	C91C (TGT→TGC)	ygiH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,202,607	0	T	C	99.7%	949.2 / ‑5.5	301	C91C (TGT→TGC)	ygiH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (155/145); total (156/145)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 314 total aligned reads displayed.

CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA  >  NC_000913/3202517‑3202696

cGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCgcctgcct                                                                                         <  2:725812/93‑1 (MQ=255)

 gACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCtt                                                                                        >  2:2644234/1‑93 (MQ=255)

 gACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCtt                                                                                        >  1:3081424/1‑93 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  1:1560295/93‑1 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  2:5613440/93‑1 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  1:7024269/93‑1 (MQ=255)

       cTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGacac                                                                                  >  2:104550/1‑93 (MQ=255)

       cTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGacac                                                                                  <  1:2361393/93‑1 (MQ=255)

        tGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAcaca                                                                                 <  1:1158736/93‑1 (MQ=255)

          aaaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               <  1:6310110/93‑1 (MQ=255)

           aaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCt                                                                              <  1:6712364/93‑1 (MQ=255)

           aaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCt                                                                              <  2:1781938/93‑1 (MQ=255)

            atgAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTg                                                                             <  2:3308945/91‑1 (MQ=255)

            aGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTg                                                                             <  1:2840393/93‑1 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            >  2:4023014/1‑93 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            >  2:2258390/1‑93 (MQ=255)

                aTGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGccc                                                                         >  2:3172549/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  1:7355584/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  1:3626220/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGGGTCAGCCCCTTCTGGCTAGGGTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  2:7097020/1‑93 (MQ=255)

                        cGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttctt                                                                 >  1:2271406/1‑93 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                <  2:5101152/93‑1 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                <  2:7923231/93‑1 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                >  2:6364452/1‑93 (MQ=255)

                         gTCTGGGGCGCGTATGAACTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTctcttc                                                                >  1:288288/1‑93 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  1:315886/93‑1 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  2:7606985/93‑1 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  1:4918421/93‑1 (MQ=255)

                               ggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAttt                                                          <  2:5180855/93‑1 (MQ=255)

                               ggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAttt                                                          <  1:5907206/93‑1 (MQ=255)

                                 cgcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaa                                                        <  2:355197/93‑1 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       >  1:5866855/1‑93 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       <  2:5736374/93‑1 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       <  2:1264341/93‑1 (MQ=255)

                                  gcgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTaaa                                                       >  1:2770483/1‑93 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  2:6926385/93‑1 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  2:6721683/93‑1 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  1:6416300/93‑1 (MQ=255)

                                     tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagga                                                    <  1:4799366/93‑1 (MQ=255)

                                     tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagga                                                    <  2:496306/93‑1 (MQ=255)

                                     tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagga                                                    <  1:3350918/93‑1 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCTCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   <  1:1977007/93‑1 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   >  1:5460428/1‑93 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   <  2:5490831/93‑1 (MQ=255)

                                      aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAaggag                                                   <  2:5050958/93‑1 (MQ=255)

                                        gAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAggagga                                                 >  1:183517/1‑93 (MQ=255)

                                         aaTTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaa                                                <  1:7684225/93‑1 (MQ=255)

                                          aTTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTCTTCTTCGGATTTAAAGGAGGaaa                                               >  1:2408371/1‑93 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  1:7192163/93‑1 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  2:2097535/93‑1 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  1:6098923/93‑1 (MQ=255)

                                            tAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAg                                             <  1:1042600/93‑1 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           >  1:2679413/1‑93 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           <  1:3464040/93‑1 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           <  1:6831714/93‑1 (MQ=255)

                                                tgtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGt                                         <  2:5442760/93‑1 (MQ=255)

                                                  tCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTg                                       >  2:6604000/1‑93 (MQ=255)

                                                   cAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGc                                      <  1:220363/93‑1 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    <  2:5343175/93‑1 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    >  2:2831499/1‑93 (MQ=255)

                                                       cccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAcc                                  >  2:1940034/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  2:1406336/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  1:3797607/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  1:4519164/1‑93 (MQ=255)

                                                         cTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGc                                >  1:5831399/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCt                               >  1:3321628/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCt                               >  2:3484291/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTCGACACATCTTGCCCGTTTTCTTCGGATTTAAAGGATGAATAGGCGTTGCTACCGCt                               >  2:7483287/1‑93 (MQ=255)

                                                            ttGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCttt                             <  1:4285739/92‑1 (MQ=255)

                                                            cTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCttt                             <  1:4835765/93‑1 (MQ=255)

                                                             tGGCTAGGCTTATTTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            <  2:7027469/93‑1 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  1:7829774/1‑93 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            <  2:3756859/93‑1 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  1:6123259/1‑93 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  2:6232237/1‑93 (MQ=255)

                                                              ggCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                           <  1:4586919/93‑1 (MQ=255)

                                                              ggCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                           <  2:468895/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          <  1:5114726/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  2:2762504/1‑93 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  1:4101769/1‑93 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  1:5277736/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGCAAAGGCGTTGCTACCGCTTTTGGTGc                       >  2:846114/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGc                       >  1:4715494/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGc                       <  1:7631392/93‑1 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     >  1:2292917/1‑93 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     >  1:6495820/1‑93 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     <  2:1860055/93‑1 (MQ=255)

                                                                      ttAATTGCCATCGCCGCCTGCCTTGGACACATCCGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAAGCGTTGCTACCGCTTTTGGTGCCATc                   >  1:5583682/1‑93 (MQ=255)

                                                                       tAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCg                  >  1:2171543/1‑93 (MQ=255)

                                                                        aaTTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTTGTGCCATCGc                 >  2:3957834/1‑93 (MQ=255)

                                                                            gCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGAAGGAAAAGGCGTTGCTACCGCTTTTGGTGCATTCGCcccc             >  2:2430865/1‑93 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           >  1:6923563/1‑93 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           <  1:4469204/93‑1 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           >  2:4857461/1‑93 (MQ=255)

                                                                               aTCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt          >  2:3275315/1‑93 (MQ=255)

                                                                                tCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTg         >  1:5036039/1‑93 (MQ=255)

                                                                                  gccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc       >  2:145222/1‑93 (MQ=255)

                                                                                   ccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCt      >  2:6470422/1‑93 (MQ=255)

                                                                                   ccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCt      <  2:6137464/93‑1 (MQ=255)

                                                                                    cgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTg     <  1:976212/93‑1 (MQ=255)

CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA  >  NC_000913/3202517‑3202696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`